RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 NDUFAB1O14561 156 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 CHN1P15882 459 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 CREB1P16220 341 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 DESP17661 470 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 ATP5OP48047 213 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 CACNA2D1P54289 1103 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 UPP1Q16831 310 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 TRIM71Q2Q1W2 868 aaKnown RBP19.91■□□□□ 0.78
SMPD3-203ENST00000563226 MSS51Q4VC12 460 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 PAN2Q504Q3 1202 aaKnown RBP19.91■□□□□ 0.78
SMPD3-203ENST00000563226 CAPN12Q6ZSI9 719 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 NLRP14Q86W24 1093 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 ZBED8Q8IZ13 594 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 CYP4X1Q8N118 509 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 SMC1BQ8NDV3 1235 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 KCTD15Q96SI1 283 aaPredicted RBP19.91■□□□□ 0.78
SMPD3-203ENST00000563226 ZNF670Q9BS34 389 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 CNOT10Q9H9A5 744 aaKnown RBP19.91■□□□□ 0.78
SMPD3-203ENST00000563226 AP4E1Q9UPM8 1137 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 E7EVH7 732 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 TCEA3O75764 348 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 CYP2F1P24903 491 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 MATKP42679 507 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 BCAR1P56945 870 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 PDIA2Q13087 525 aaKnown RBP19.9■□□□□ 0.78
SMPD3-203ENST00000563226 MTM1Q13496 603 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 ITGA7Q13683 1181 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 DPYSL2Q16555 572 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 TIGD5Q53EQ6 642 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 EFHC1Q5JVL4 640 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 FNBP1LQ5T0N5 605 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 HFE2Q6ZVN8 426 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 MYCBPAPQ8TBZ2 947 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 WDR83Q9BRX9 315 aaKnown RBP19.9■□□□□ 0.78
SMPD3-203ENST00000563226 USP29Q9HBJ7 922 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 ZNF623O75123 536 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 ABHD2P08910 425 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 FAM163BP0C2L3 166 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 TGM2P21980 687 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 SULT1E1P49888 294 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 MRPS5P82675 430 aaKnown RBP19.9■□□□□ 0.78
SMPD3-203ENST00000563226 NOGQ13253 232 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 CEP128Q6ZU80 1094 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 GPRIN1Q7Z2K8 1008 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 PCGF5Q86SE9 256 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 FAM35AQ86V20 835 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 FAM131BQ86XD5 332 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 ANKMY2Q8IV38 441 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 PYROXD2Q8N2H3 581 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 PCED1BQ96HM7 432 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 SMOQ99835 787 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 ADAM2Q99965 735 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 STMN4Q9H169 189 aaPredicted RBP19.9■□□□□ 0.78
SMPD3-203ENST00000563226 NRDE2Q9H7Z3 1164 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 GPBP1L1Q9HC44 474 aaPredicted RBP19.9■□□□□ 0.78
SMPD3-203ENST00000563226 TBK1Q9UHD2 729 aa19.9■□□□□ 0.78
SMPD3-203ENST00000563226 ALOX15BO15296 676 aa19.89■□□□□ 0.77
SMPD3-203ENST00000563226 TRAPPC3O43617 180 aa19.89■□□□□ 0.77
SMPD3-203ENST00000563226 DAB1O75553 588 aa19.89■□□□□ 0.77
SMPD3-203ENST00000563226 FAM200BP0CF97 657 aa19.89■□□□□ 0.77
SMPD3-203ENST00000563226 GCAP28676 217 aa19.89■□□□□ 0.77
SMPD3-203ENST00000563226 SLC8A3P57103 927 aa19.89■□□□□ 0.77
SMPD3-203ENST00000563226 BASP1P80723 227 aaKnown RBP19.89■□□□□ 0.77
SMPD3-203ENST00000563226 HIF1AQ16665 826 aa19.89■□□□□ 0.77
SMPD3-203ENST00000563226 DCAF6Q58WW2 860 aa19.89■□□□□ 0.77
SMPD3-203ENST00000563226 CENPUQ71F23 418 aa19.89■□□□□ 0.77
SMPD3-203ENST00000563226 CTU1Q7Z7A3 348 aaKnown RBP19.89■□□□□ 0.77
SMPD3-203ENST00000563226 TMEM86AQ8N2M4 240 aa19.89■□□□□ 0.77
SMPD3-203ENST00000563226 KCTD13Q8WZ19 329 aa19.89■□□□□ 0.77
SMPD3-203ENST00000563226 ARHGEF2Q92974 986 aaKnown RBP19.89■□□□□ 0.77
SMPD3-203ENST00000563226 CCT8L2Q96SF2 557 aa19.89■□□□□ 0.77
SMPD3-203ENST00000563226 KCNK16Q96T55 309 aa19.89■□□□□ 0.77
SMPD3-203ENST00000563226 NCAPGQ9BPX3 1015 aa19.89■□□□□ 0.77
SMPD3-203ENST00000563226 RTP3Q9BQQ7 232 aa19.89■□□□□ 0.77
SMPD3-203ENST00000563226 RHOBTB2Q9BYZ6 727 aa19.89■□□□□ 0.77
SMPD3-203ENST00000563226 FAM107BQ9H098 131 aa19.89■□□□□ 0.77
SMPD3-203ENST00000563226 LRRC4Q9HBW1 653 aa19.89■□□□□ 0.77
SMPD3-203ENST00000563226 TMPRSS4Q9NRS4 437 aa19.89■□□□□ 0.77
SMPD3-203ENST00000563226 NOD1Q9Y239 953 aa19.89■□□□□ 0.77
SMPD3-203ENST00000563226 A0A0U1RQF3 1178 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 NRP1O14786 923 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 RPLP2P05387 115 aaKnown RBP19.88■□□□□ 0.77
SMPD3-203ENST00000563226 RBL1P28749 1068 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 BRCC3P46736 316 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 LHX1P48742 406 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 PTK7Q13308 1070 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 SLC25A52Q3SY17 297 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 SYCP2LQ5T4T6 812 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 SYPL2Q5VXT5 272 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 CD300LGQ6UXG3 332 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 STRADAQ7RTN6 431 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 VSIG1Q86XK7 387 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 CCDC33Q8N5R6 958 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 PCSK9Q8NBP7 692 aaKnown RBP19.88■□□□□ 0.77
SMPD3-203ENST00000563226 ZMIZ2Q8NF64 920 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 CD99L2Q8TCZ2 262 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 HASPINQ8TF76 798 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 ZNF473Q8WTR7 871 aaKnown RBP19.88■□□□□ 0.77
SMPD3-203ENST00000563226 ATXN2LQ8WWM7 1075 aaKnown RBP19.88■□□□□ 0.77
SMPD3-203ENST00000563226 EURLQ9NYK6 297 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms