RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 CTCFP49711 727 aaPredicted RBP13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 SULT1E1P49888 294 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 ARL4CP56559 192 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 BCAR1P56945 870 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 MRPS5P82675 430 aaKnown RBP13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 GUCY1A3Q02108 690 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 CBLBQ13191 982 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 TUSC3Q13454 348 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 UPP1Q16831 310 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 ZC3H12AQ5D1E8 599 aaKnown RBP13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 UBAP2Q5T6F2 1119 aaKnown RBP13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 DARS2Q6PI48 645 aaKnown RBP13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 CLEC20AQ6ZU45 233 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 FAM35AQ86V20 835 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 CDKL3Q8IVW4 592 aaPredicted RBP13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 UNC45BQ8IWX7 931 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 PQLC3Q8N755 202 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 PLD5Q8N7P1 536 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 NAT8LQ8N9F0 302 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 UHMK1Q8TAS1 419 aaKnown RBP13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 PXYLP1Q8TE99 480 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 EPN3Q9H201 632 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 LRRC4CQ9HCJ2 640 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 DNAJC17Q9NVM6 304 aaKnown RBP13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 GPATCH2LQ9NWQ4 482 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 WBP1LQ9NX94 342 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 PAK5Q9P286 719 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 SAE1Q9UBE0 346 aaPredicted RBP13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 AP4E1Q9UPM8 1137 aa13.17□□□□□ -0.3
AC055717.2-201ENST00000561864 COL4A4P53420 1690 aaPredicted RBP13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 CASTOR2A6NHX0 329 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 SMIM23A6NLE4 172 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 DCDC2CA8MYV0 355 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 C9IYK1 514 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 H7C0C1 242 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 ALOX15BO15296 676 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 TRPA1O75762 1119 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 ZNF189O75820 626 aaPredicted RBP13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 MYCNP04198 464 aaPredicted RBP13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 CYP2F1P24903 491 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 L1CAMP32004 1257 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 ATP5OP48047 213 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 NR2C2P49116 596 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 AIF1P55008 147 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 GDF10P55107 478 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 HNRNPH2P55795 449 aaKnown RBP13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 YWHAZP63104 245 aaKnown RBP13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 CAP1Q01518 475 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 XRCC4Q13426 336 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 HIF1AQ16665 826 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 CA9Q16790 459 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 C1orf228Q6PIY5 440 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 PPP1R21Q6ZMI0 780 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 BNIPLQ7Z465 357 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 DEFB106AQ8N104 65 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 FAM71DQ8N9W8 422 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 C3orf58Q8NDZ4 430 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 PCDH19Q8TAB3 1148 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 MYCBPAPQ8TBZ2 947 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 CPT1BQ92523 772 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 NT5C3BQ969T7 300 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 GLT1D1Q96MS3 346 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 ADAM2Q99965 735 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 BEGAINQ9BUH8 593 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 FRMD8Q9BZ67 464 aaPredicted RBP13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 NRDE2Q9H7Z3 1164 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 CNGB3Q9NQW8 809 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 RRN3Q9NYV6 651 aa13.16□□□□□ -0.3
AC055717.2-201ENST00000561864 E7ESA3 106 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 M0QZQ0 153 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 CLDN5O00501 218 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 CHADO15335 359 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 CDH16O75309 829 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 AP1G2O75843 785 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 ZBED1O96006 694 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 TFE3P19532 575 aaPredicted RBP13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 SLCO1A2P46721 670 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 AFF1P51825 1210 aaKnown RBP13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 TKTL1P51854 596 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 DAOAP59103 153 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 RNASELQ05823 741 aaKnown RBP13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 NR1H3Q13133 447 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 LONRF1Q17RB8 773 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 TIGD5Q53EQ6 642 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 KIAA0319Q5VV43 1072 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 TTC19Q6DKK2 380 aaPredicted RBP13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 NPNTQ6UXI9 565 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 FAM43BQ6ZT52 329 aaPredicted RBP13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 ZNF598Q86UK7 904 aaKnown RBP13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 ECHDC2Q86YB7 292 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 TDRPQ86YL5 185 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 CD99L2Q8TCZ2 262 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 BCAS4Q8TDM0 211 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 FAM149B1Q96BN6 582 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 SMARCD1Q96GM5 515 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 C9orf72Q96LT7 481 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 PWWP2AQ96N64 755 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 KCTD15Q96SI1 283 aaPredicted RBP13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 NPY6RQ99463 290 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 ACBD6Q9BR61 282 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms