RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 UBXN2BQ14CS0 331 aa14.6□□□□□ -0.07
TPM1-230ENST00000561266 SUGP1Q8IWZ8 645 aaKnown RBP14.6□□□□□ -0.07
TPM1-230ENST00000561266 DDX1Q92499 740 aaKnown RBP14.6□□□□□ -0.07
TPM1-230ENST00000561266 EDEM1Q92611 657 aa14.6□□□□□ -0.07
TPM1-230ENST00000561266 PIWIL1Q96J94 861 aaKnown RBP14.6□□□□□ -0.07
TPM1-230ENST00000561266 FAM81BQ96LP2 452 aa14.6□□□□□ -0.07
TPM1-230ENST00000561266 ERGIC2Q96RQ1 377 aa14.6□□□□□ -0.07
TPM1-230ENST00000561266 SLC4A5Q9BY07 1137 aa14.6□□□□□ -0.07
TPM1-230ENST00000561266 STK33Q9BYT3 514 aa14.6□□□□□ -0.07
TPM1-230ENST00000561266 NAT10Q9H0A0 1025 aaKnown RBP14.6□□□□□ -0.07
TPM1-230ENST00000561266 LRRC4Q9HBW1 653 aa14.6□□□□□ -0.07
TPM1-230ENST00000561266 NLRC4Q9NPP4 1024 aa14.6□□□□□ -0.07
TPM1-230ENST00000561266 RTN4Q9NQC3 1192 aaKnown RBP14.6□□□□□ -0.07
TPM1-230ENST00000561266 THG1LQ9NWX6 298 aaKnown RBP14.6□□□□□ -0.07
TPM1-230ENST00000561266 NDRG2Q9UN36 371 aaKnown RBP14.6□□□□□ -0.07
TPM1-230ENST00000561266 SMTNL1A8MU46 457 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 F8VZ95 297 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 FYNP06241 537 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 PTMSP20962 102 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 ATP5C1P36542 298 aaKnown RBP14.59□□□□□ -0.07
TPM1-230ENST00000561266 PLCB2Q00722 1185 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 MESP2Q0VG99 397 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 STILQ15468 1287 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 ITPRIPL2Q3MIP1 535 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 C10orf120Q5SQS8 335 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 FKBP15Q5T1M5 1219 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 BSPRYQ5W0U4 402 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 NOP9Q86U38 636 aaKnown RBP14.59□□□□□ -0.07
TPM1-230ENST00000561266 BBS7Q8IWZ6 715 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 SCUBE3Q8IX30 993 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 ADGRG2Q8IZP9 1017 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 SCML4Q8N228 414 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 CSGALNACT1Q8TDX6 532 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 FAM3CQ92520 227 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 EZH1Q92800 747 aaPredicted RBP14.59□□□□□ -0.07
TPM1-230ENST00000561266 CPXM1Q96SM3 734 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 MIS12Q9H081 205 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 ECT2Q9H8V3 914 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 RBM12Q9NTZ6 932 aaKnown RBP14.59□□□□□ -0.07
TPM1-230ENST00000561266 CLIC5Q9NZA1 410 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 PCDHGC3Q9UN70 934 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 SIT1Q9Y3P8 196 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 KIAA1549LQ6ZVL6 1849 aa14.59□□□□□ -0.07
TPM1-230ENST00000561266 E5RJQ4 531 aa14.58□□□□□ -0.08
TPM1-230ENST00000561266 PAPSS1O43252 624 aaPredicted RBP14.58□□□□□ -0.08
TPM1-230ENST00000561266 GFPT2O94808 682 aa14.58□□□□□ -0.08
TPM1-230ENST00000561266 KLKB1P03952 638 aa14.58□□□□□ -0.08
TPM1-230ENST00000561266 CHRNB2P17787 502 aa14.58□□□□□ -0.08
TPM1-230ENST00000561266 HOXC13P31276 330 aa14.58□□□□□ -0.08
TPM1-230ENST00000561266 GJA4P35212 333 aa14.58□□□□□ -0.08
TPM1-230ENST00000561266 IFNAR2P48551 515 aa14.58□□□□□ -0.08
TPM1-230ENST00000561266 PDE6CP51160 858 aa14.58□□□□□ -0.08
TPM1-230ENST00000561266 KPNA1P52294 538 aaPredicted RBP14.58□□□□□ -0.08
TPM1-230ENST00000561266 SLC8A3P57103 927 aa14.58□□□□□ -0.08
TPM1-230ENST00000561266 EFEMP1Q12805 493 aa14.58□□□□□ -0.08
TPM1-230ENST00000561266 TCF15Q12870 199 aa14.58□□□□□ -0.08
TPM1-230ENST00000561266 PON2Q15165 354 aa14.58□□□□□ -0.08
TPM1-230ENST00000561266 SKOR2Q2VWA4 1001 aaPredicted RBP14.58□□□□□ -0.08
TPM1-230ENST00000561266 TAF3Q5VWG9 929 aa14.58□□□□□ -0.08
TPM1-230ENST00000561266 CC2D1AQ6P1N0 951 aaPredicted RBP14.58□□□□□ -0.08
TPM1-230ENST00000561266 RHBDF2Q6PJF5 856 aa14.58□□□□□ -0.08
TPM1-230ENST00000561266 MIB1Q86YT6 1006 aa14.58□□□□□ -0.08
TPM1-230ENST00000561266 ZNF276Q8N554 614 aa14.58□□□□□ -0.08
TPM1-230ENST00000561266 SLC20A1Q8WUM9 679 aa14.58□□□□□ -0.08
TPM1-230ENST00000561266 SHDQ96IW2 340 aa14.58□□□□□ -0.08
TPM1-230ENST00000561266 HSFY1Q96LI6 401 aa14.58□□□□□ -0.08
TPM1-230ENST00000561266 CNGB3Q9NQW8 809 aa14.58□□□□□ -0.08
TPM1-230ENST00000561266 SFMBT1Q9UHJ3 866 aa14.58□□□□□ -0.08
TPM1-230ENST00000561266 E2F8A0AVK6 867 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 MED7O43513 233 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 STC2O76061 302 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 CYP17A1P05093 508 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 HMBSP08397 361 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 CHRNB1P11230 501 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 CYP11B1P15538 503 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 PSEN1P49768 467 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 MLLT6P55198 1093 aaPredicted RBP14.57□□□□□ -0.08
TPM1-230ENST00000561266 PTK2Q05397 1052 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 GAS6Q14393 721 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 PDGFRLQ15198 375 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 TAF5Q15542 800 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 FSTL4Q6MZW2 842 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 KLHDC10Q6PID8 442 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 ZNF852Q6ZMS4 543 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 TMEM110Q86TL2 294 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 C12orf40Q86WS4 652 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 SFTPA1Q8IWL2 248 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 SIX6OS1Q8N1H7 587 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 C1orf131Q8NDD1 294 aaKnown RBP14.57□□□□□ -0.08
TPM1-230ENST00000561266 CLDN23Q96B33 292 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 C8orf33Q9H7E9 229 aaPredicted RBP14.57□□□□□ -0.08
TPM1-230ENST00000561266 ST7Q9NRC1 585 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 C2orf42Q9NWW7 574 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 RASAL2Q9UJF2 1139 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 DNMT3LQ9UJW3 386 aa14.57□□□□□ -0.08
TPM1-230ENST00000561266 NOCTQ9UK39 431 aaKnown RBP14.57□□□□□ -0.08
TPM1-230ENST00000561266 MYO18AQ92614 2054 aaKnown RBP14.56□□□□□ -0.08
TPM1-230ENST00000561266 A0A1B0GTH6 734 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 MSI1O43347 362 aaKnown RBP14.56□□□□□ -0.08
TPM1-230ENST00000561266 ERBB2P04626 1255 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms