RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 HOMER2Q9NSB8 354 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 DNMT3BQ9UBC3 853 aaKnown RBP4.03□□□□□ -1.76
USP8-216ENST00000561206 GABBR1Q9UBS5 961 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 IP6K2Q9UHH9 426 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 MAFFQ9ULX9 164 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 USP22Q9UPT9 525 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 PAXBP1Q9Y5B6 917 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 COL4A3BPQ9Y5P4 624 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 HS3ST3B1Q9Y662 390 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 A0A087WYN8 130 aa4.02□□□□□ -1.77
USP8-216ENST00000561206 CD3EAPO15446 510 aaKnown RBP4.02□□□□□ -1.77
USP8-216ENST00000561206 CREB1P16220 341 aa4.02□□□□□ -1.77
USP8-216ENST00000561206 NCLP19338 710 aaKnown RBP4.02□□□□□ -1.77
USP8-216ENST00000561206 EN2P19622 333 aaPredicted RBP4.02□□□□□ -1.77
USP8-216ENST00000561206 UQCRC1P31930 480 aa4.02□□□□□ -1.77
USP8-216ENST00000561206 TIRAPP58753 221 aa4.02□□□□□ -1.77
USP8-216ENST00000561206 COLCA1Q6ZS62 124 aa4.02□□□□□ -1.77
USP8-216ENST00000561206 DAAM2Q86T65 1068 aa4.02□□□□□ -1.77
USP8-216ENST00000561206 ZNF479Q96JC4 524 aa4.02□□□□□ -1.77
USP8-216ENST00000561206 ZMAT3Q9HA38 289 aaKnown RBP4.02□□□□□ -1.77
USP8-216ENST00000561206 ZBTB40Q9NUA8 1239 aa4.02□□□□□ -1.77
USP8-216ENST00000561206 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.02□□□□□ -1.77
USP8-216ENST00000561206 KIF26BQ2KJY2 2108 aa4.01□□□□□ -1.77
USP8-216ENST00000561206 AP1G1O43747 822 aa4.01□□□□□ -1.77
USP8-216ENST00000561206 UBXN7O94888 489 aa4.01□□□□□ -1.77
USP8-216ENST00000561206 PLGP00747 810 aaPredicted RBP4.01□□□□□ -1.77
USP8-216ENST00000561206 YPEL5P62699 121 aa4.01□□□□□ -1.77
USP8-216ENST00000561206 CFHR3Q02985 330 aa4.01□□□□□ -1.77
USP8-216ENST00000561206 INPP5JQ15735 1006 aaPredicted RBP4.01□□□□□ -1.77
USP8-216ENST00000561206 SLC9C1Q4G0N8 1177 aa4.01□□□□□ -1.77
USP8-216ENST00000561206 UBE2Q1Q7Z7E8 422 aa4.01□□□□□ -1.77
USP8-216ENST00000561206 ZNF329Q86UD4 541 aa4.01□□□□□ -1.77
USP8-216ENST00000561206 OR56A3Q8NH54 315 aa4.01□□□□□ -1.77
USP8-216ENST00000561206 MAML1Q92585 1016 aa4.01□□□□□ -1.77
USP8-216ENST00000561206 HOOK2Q96ED9 719 aa4.01□□□□□ -1.77
USP8-216ENST00000561206 EDC3Q96F86 508 aaKnown RBP4.01□□□□□ -1.77
USP8-216ENST00000561206 HIC2Q96JB3 615 aa4.01□□□□□ -1.77
USP8-216ENST00000561206 PPP1R9BQ96SB3 815 aa4.01□□□□□ -1.77
USP8-216ENST00000561206 ZNF518BQ9C0D4 1074 aa4.01□□□□□ -1.77
USP8-216ENST00000561206 MGAT4CQ9UBM8 478 aa4.01□□□□□ -1.77
USP8-216ENST00000561206 FER1L4A9Z1Z3 1794 aa4.01□□□□□ -1.77
USP8-216ENST00000561206 PHGDHO43175 533 aaKnown RBP4□□□□□ -1.77
USP8-216ENST00000561206 CCP110O43303 1012 aa4□□□□□ -1.77
USP8-216ENST00000561206 TBC1D4O60343 1298 aa4□□□□□ -1.77
USP8-216ENST00000561206 RASAL1O95294 804 aa4□□□□□ -1.77
USP8-216ENST00000561206 NGFRP08138 427 aa4□□□□□ -1.77
USP8-216ENST00000561206 KITP10721 976 aa4□□□□□ -1.77
USP8-216ENST00000561206 PLA2G2AP14555 144 aa4□□□□□ -1.77
USP8-216ENST00000561206 HSF1Q00613 529 aa4□□□□□ -1.77
USP8-216ENST00000561206 SLC14A1Q13336 389 aa4□□□□□ -1.77
USP8-216ENST00000561206 MTX1Q13505 466 aa4□□□□□ -1.77
USP8-216ENST00000561206 MFSD13AQ14CX5 517 aa4□□□□□ -1.77
USP8-216ENST00000561206 INSCQ1MX18 579 aa4□□□□□ -1.77
USP8-216ENST00000561206 CC2D1BQ5T0F9 858 aaKnown RBP4□□□□□ -1.77
USP8-216ENST00000561206 CACHD1Q5VU97 1274 aa4□□□□□ -1.77
USP8-216ENST00000561206 CAPRIN2Q6IMN6 1127 aaKnown RBP4□□□□□ -1.77
USP8-216ENST00000561206 ZDHHC24Q6UX98 284 aa4□□□□□ -1.77
USP8-216ENST00000561206 WIPF2Q8TF74 440 aaPredicted RBP4□□□□□ -1.77
USP8-216ENST00000561206 SPSB4Q96A44 273 aa4□□□□□ -1.77
USP8-216ENST00000561206 KAZALD1Q96I82 304 aa4□□□□□ -1.77
USP8-216ENST00000561206 ATP6V0A4Q9HBG4 840 aa4□□□□□ -1.77
USP8-216ENST00000561206 NMRK2Q9NPI5 230 aa4□□□□□ -1.77
USP8-216ENST00000561206 A1CFQ9NQ94 594 aaKnown RBP4□□□□□ -1.77
USP8-216ENST00000561206 LOC102723971A0A1B0GUV8 181 aa3.99□□□□□ -1.77
USP8-216ENST00000561206 CLIC1O00299 241 aa3.99□□□□□ -1.77
USP8-216ENST00000561206 RRP9O43818 475 aaKnown RBP3.99□□□□□ -1.77
USP8-216ENST00000561206 MCM5P33992 734 aa3.99□□□□□ -1.77
USP8-216ENST00000561206 AGFG1P52594 562 aaKnown RBP3.99□□□□□ -1.77
USP8-216ENST00000561206 ZNF324BQ6AW86 544 aaPredicted RBP3.99□□□□□ -1.77
USP8-216ENST00000561206 B3GNT9Q6UX72 402 aa3.99□□□□□ -1.77
USP8-216ENST00000561206 KCTD20Q7Z5Y7 419 aa3.99□□□□□ -1.77
USP8-216ENST00000561206 MICU3Q86XE3 530 aa3.99□□□□□ -1.77
USP8-216ENST00000561206 MMP21Q8N119 569 aa3.99□□□□□ -1.77
USP8-216ENST00000561206 PPP1R35Q8TAP8 253 aa3.99□□□□□ -1.77
USP8-216ENST00000561206 AIFM3Q96NN9 605 aa3.99□□□□□ -1.77
USP8-216ENST00000561206 TAAR9Q96RI9 348 aa3.99□□□□□ -1.77
USP8-216ENST00000561206 RHOBTB2Q9BYZ6 727 aa3.99□□□□□ -1.77
USP8-216ENST00000561206 AASDHPPTQ9NRN7 309 aa3.99□□□□□ -1.77
USP8-216ENST00000561206 PNMA8BQ9ULN7 279 aaPredicted RBP3.99□□□□□ -1.77
USP8-216ENST00000561206 CADPSQ9ULU8 1353 aa3.99□□□□□ -1.77
USP8-216ENST00000561206 MBD3L4A6NDZ8 208 aaPredicted RBP3.98□□□□□ -1.77
USP8-216ENST00000561206 MBD3L3A6NE82 208 aaPredicted RBP3.98□□□□□ -1.77
USP8-216ENST00000561206 A8MVJ9 347 aa3.98□□□□□ -1.77
USP8-216ENST00000561206 EXOC5O00471 708 aa3.98□□□□□ -1.77
USP8-216ENST00000561206 TBX3O15119 743 aa3.98□□□□□ -1.77
USP8-216ENST00000561206 RGS10O43665 173 aa3.98□□□□□ -1.77
USP8-216ENST00000561206 IGSF3O75054 1194 aa3.98□□□□□ -1.77
USP8-216ENST00000561206 CGAP01215 116 aa3.98□□□□□ -1.77
USP8-216ENST00000561206 FGF2P09038 288 aa3.98□□□□□ -1.77
USP8-216ENST00000561206 CT47B1P0C2W7 299 aaPredicted RBP3.98□□□□□ -1.77
USP8-216ENST00000561206 HGFP14210 728 aa3.98□□□□□ -1.77
USP8-216ENST00000561206 KLRC1P26715 233 aa3.98□□□□□ -1.77
USP8-216ENST00000561206 TACR3P29371 465 aa3.98□□□□□ -1.77
USP8-216ENST00000561206 ZNF750Q32MQ0 723 aa3.98□□□□□ -1.77
USP8-216ENST00000561206 ANO6Q4KMQ2 910 aa3.98□□□□□ -1.77
USP8-216ENST00000561206 COL23A1Q86Y22 540 aaPredicted RBP3.98□□□□□ -1.77
USP8-216ENST00000561206 C16orf71Q8IYS4 520 aaPredicted RBP3.98□□□□□ -1.77
USP8-216ENST00000561206 CHPFQ8IZ52 775 aa3.98□□□□□ -1.77
USP8-216ENST00000561206 C12orf76Q8N812 135 aaPredicted RBP3.98□□□□□ -1.77
USP8-216ENST00000561206 PNPLA1Q8N8W4 532 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms