RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 BBS12Q6ZW61 710 aa17.1■□□□□ 0.33
TPM1-228ENST00000560975 SPATA18Q8TC71 538 aa17.1■□□□□ 0.33
TPM1-228ENST00000560975 JADE3Q92613 823 aa17.1■□□□□ 0.33
TPM1-228ENST00000560975 CIDEBQ9UHD4 219 aa17.1■□□□□ 0.33
TPM1-228ENST00000560975 HEMK1Q9Y5R4 338 aaPredicted RBP17.1■□□□□ 0.33
TPM1-228ENST00000560975 BBOX1O75936 387 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 CALB1P05937 261 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 CSH1P0DML2 217 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 CSH2P0DML3 217 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 KCNA4P22459 653 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 KDELR1P24390 212 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 GAB3Q8WWW8 586 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 HSPBAP1Q96EW2 488 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 BTBD9Q96Q07 612 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 XPNPEP1Q9NQW7 623 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 RAB6BQ9NRW1 208 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 PNPOQ9NVS9 261 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 THAP1Q9NVV9 213 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 TJP2Q9UDY2 1190 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 TDRKHQ9Y2W6 561 aaKnown RBP17.09■□□□□ 0.33
TPM1-228ENST00000560975 TTC36A6NLP5 189 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 TTLL13PA6NNM8 815 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 H3BSA7 217 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 KLHL2O95198 593 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 CRTAMO95727 393 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 SRGAP2CP0DJJ0 459 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 SRGAP2BP0DMP2 458 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 MSX2P35548 267 aaPredicted RBP17.09■□□□□ 0.33
TPM1-228ENST00000560975 ATXN3P54252 364 aaPredicted RBP17.09■□□□□ 0.33
TPM1-228ENST00000560975 ACAP1Q15027 740 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 SEZ6Q53EL9 994 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 TSHZ1Q6ZSZ6 1077 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 FRMD7Q6ZUT3 714 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 LDHDQ86WU2 507 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 RTKN2Q8IZC4 609 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 EMC1Q8N766 993 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 KCTD6Q8NC69 237 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 ACTRT2Q8TDY3 377 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 AGO4Q9HCK5 861 aaKnown RBP17.09■□□□□ 0.33
TPM1-228ENST00000560975 PCDHGA4Q9Y5G9 962 aa17.09■□□□□ 0.33
TPM1-228ENST00000560975 MAP3K6O95382 1288 aa17.08■□□□□ 0.33
TPM1-228ENST00000560975 C1QAP02745 245 aa17.08■□□□□ 0.33
TPM1-228ENST00000560975 TSHRP16473 764 aa17.08■□□□□ 0.33
TPM1-228ENST00000560975 YWHAZP63104 245 aaKnown RBP17.08■□□□□ 0.33
TPM1-228ENST00000560975 SMAD1Q15797 465 aaKnown RBP17.08■□□□□ 0.33
TPM1-228ENST00000560975 TKFCQ3LXA3 575 aa17.08■□□□□ 0.33
TPM1-228ENST00000560975 FAM182BQ5T319 152 aa17.08■□□□□ 0.33
TPM1-228ENST00000560975 LGSNQ5TDP6 509 aa17.08■□□□□ 0.33
TPM1-228ENST00000560975 MEX3CQ5U5Q3 659 aaKnown RBP17.08■□□□□ 0.33
TPM1-228ENST00000560975 GALNT4Q8N4A0 578 aa17.08■□□□□ 0.33
TPM1-228ENST00000560975 MARVELD2Q8N4S9 558 aa17.08■□□□□ 0.33
TPM1-228ENST00000560975 ARFGAP1Q8N6T3 406 aa17.08■□□□□ 0.33
TPM1-228ENST00000560975 ZNF513Q8N8E2 541 aaPredicted RBP17.08■□□□□ 0.33
TPM1-228ENST00000560975 JOSD2Q8TAC2 188 aa17.08■□□□□ 0.33
TPM1-228ENST00000560975 PIWIL2Q8TC59 973 aaKnown RBP17.08■□□□□ 0.33
TPM1-228ENST00000560975 AP4B1Q9Y6B7 739 aa17.08■□□□□ 0.33
TPM1-228ENST00000560975 AK5Q9Y6K8 562 aa17.08■□□□□ 0.33
TPM1-228ENST00000560975 ZNF536O15090 1300 aa17.08■□□□□ 0.33
TPM1-228ENST00000560975 AP1G1O43747 822 aa17.08■□□□□ 0.32
TPM1-228ENST00000560975 STRNO43815 780 aa17.08■□□□□ 0.32
TPM1-228ENST00000560975 LRCH4O75427 683 aa17.08■□□□□ 0.32
TPM1-228ENST00000560975 STAM2O75886 525 aa17.08■□□□□ 0.32
TPM1-228ENST00000560975 SLC5A2P31639 672 aa17.08■□□□□ 0.32
TPM1-228ENST00000560975 MYBPC1Q00872 1141 aa17.08■□□□□ 0.32
TPM1-228ENST00000560975 DCTN2Q13561 401 aaKnown RBP17.08■□□□□ 0.32
TPM1-228ENST00000560975 SH3D19Q5HYK7 790 aa17.08■□□□□ 0.32
TPM1-228ENST00000560975 ZBTB41Q5SVQ8 909 aa17.08■□□□□ 0.32
TPM1-228ENST00000560975 OGFRL1Q5TC84 451 aaPredicted RBP17.08■□□□□ 0.32
TPM1-228ENST00000560975 GPAT2Q6NUI2 795 aa17.08■□□□□ 0.32
TPM1-228ENST00000560975 TRMT10BQ6PF06 316 aaKnown RBP17.08■□□□□ 0.32
TPM1-228ENST00000560975 TRIM67Q6ZTA4 783 aa17.08■□□□□ 0.32
TPM1-228ENST00000560975 KIAA0319LQ8IZA0 1049 aa17.08■□□□□ 0.32
TPM1-228ENST00000560975 PHTF2Q8N3S3 785 aa17.08■□□□□ 0.32
TPM1-228ENST00000560975 CCDC33Q8N5R6 958 aa17.08■□□□□ 0.32
TPM1-228ENST00000560975 TFB1MQ8WVM0 346 aaKnown RBP17.08■□□□□ 0.32
TPM1-228ENST00000560975 RBM38Q9H0Z9 239 aaKnown RBP17.08■□□□□ 0.32
TPM1-228ENST00000560975 ZNF541Q9H0D2 1346 aa17.08■□□□□ 0.32
TPM1-228ENST00000560975 A0A1B0GTW7 788 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 SUPT3HO75486 399 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 LIG4P49917 911 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 EMP3P54852 163 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 MCCD1P59942 119 aaPredicted RBP17.07■□□□□ 0.32
TPM1-228ENST00000560975 MMRN1Q13201 1228 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 FAM98CQ17RN3 349 aaKnown RBP17.07■□□□□ 0.32
TPM1-228ENST00000560975 HSP90AA5PQ58FG0 334 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 C6orf52Q5T4I8 152 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 PDPK2PQ6A1A2 396 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 ADGRF2Q8IZF7 708 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 PQLC1Q8N2U9 271 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 FBXW8Q8N3Y1 598 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 SENP6Q9GZR1 1112 aaPredicted RBP17.07■□□□□ 0.32
TPM1-228ENST00000560975 LIN28AQ9H9Z2 209 aaKnown RBP17.07■□□□□ 0.32
TPM1-228ENST00000560975 ZNF711Q9Y462 761 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 TCRBV5S1A1TA0A578 114 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 H7C0C1 242 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 ATP5OP48047 213 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 SLC1A6P48664 564 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 SLC25A11Q02978 314 aaKnown RBP17.07■□□□□ 0.32
TPM1-228ENST00000560975 MTMR1Q13613 665 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 KRT81Q14533 505 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms