RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 SNX25Q9H3E2 840 aa11.37□□□□□ -0.59
TPM1-227ENST00000560970 DPEP3Q9H4B8 488 aa11.37□□□□□ -0.59
TPM1-227ENST00000560970 TMEM9BQ9NQ34 198 aa11.37□□□□□ -0.59
TPM1-227ENST00000560970 SMPD4Q9NXE4 827 aa11.37□□□□□ -0.59
TPM1-227ENST00000560970 NXF1Q9UBU9 619 aaKnown RBP11.37□□□□□ -0.59
TPM1-227ENST00000560970 ATP8B3O60423 1300 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 MUC22E2RYF6 1773 aaPredicted RBP11.36□□□□□ -0.59
TPM1-227ENST00000560970 BICDL2A1A5D9 508 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 C4orf47A7E2U8 309 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.36□□□□□ -0.59
TPM1-227ENST00000560970 KHNYNO15037 678 aaKnown RBP11.36□□□□□ -0.59
TPM1-227ENST00000560970 ASS1P00966 412 aaKnown RBP11.36□□□□□ -0.59
TPM1-227ENST00000560970 APODP05090 189 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 PDGFRBP09619 1106 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 CHRM1P11229 460 aaPredicted RBP11.36□□□□□ -0.59
TPM1-227ENST00000560970 ADH5P11766 374 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 ASPAP45381 313 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 CDH8P55286 799 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 KDSRQ06136 332 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 IFRD2Q12894 506 aaPredicted RBP11.36□□□□□ -0.59
TPM1-227ENST00000560970 DHCR24Q15392 516 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 ZNF667Q5HYK9 610 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 TCERG1LQ5VWI1 586 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 CCDC33Q8N5R6 958 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 ALLCQ8N6M5 410 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 B3GALNT2Q8NCR0 500 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 PDZD8Q8NEN9 1154 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 OLIG1Q8TAK6 271 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 ZNF518BQ9C0D4 1074 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 LINC00597Q9H2U6 94 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 CFAP97Q9P2B7 532 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 HMGXB4Q9UGU5 601 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 RWDD2AQ9UIY3 292 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 INVSQ9Y283 1065 aa11.36□□□□□ -0.59
TPM1-227ENST00000560970 SCAMP3O14828 347 aaKnown RBP11.35□□□□□ -0.59
TPM1-227ENST00000560970 CLSTN1O94985 981 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 KAT7O95251 611 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 KLF8O95600 359 aaPredicted RBP11.35□□□□□ -0.59
TPM1-227ENST00000560970 ABL1P00519 1130 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 PROS1P07225 676 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 MBL2P11226 248 aaPredicted RBP11.35□□□□□ -0.59
TPM1-227ENST00000560970 GTF2H1P32780 548 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 P2RY2P41231 377 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 DHPSP49366 369 aaPredicted RBP11.35□□□□□ -0.59
TPM1-227ENST00000560970 CACNA2D1P54289 1103 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 TAF10Q12962 218 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 CCDC40Q4G0X9 1142 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 EOGTQ5NDL2 527 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 SH3PXD2AQ5TCZ1 1133 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 KRT39Q6A163 491 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 UNQ6494/PRO21346Q6UXR6 183 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 C12orf40Q86WS4 652 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 TTC30AQ86WT1 665 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 SFTPA1Q8IWL2 248 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 IL17RCQ8NAC3 791 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 MLKLQ8NB16 471 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 OR6B3Q8NGW1 331 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 OVCA2Q8WZ82 227 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 PNKPQ96T60 521 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 SRRTQ9BXP5 876 aaKnown RBP11.35□□□□□ -0.59
TPM1-227ENST00000560970 POLMQ9NP87 494 aaPredicted RBP11.35□□□□□ -0.59
TPM1-227ENST00000560970 ARHGEF4Q9NR80 690 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 TMEM30AQ9NV96 361 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 TMEM63CQ9P1W3 806 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 BCCIPQ9P287 314 aaKnown RBP eCLIP11.35□□□□□ -0.59
TPM1-227ENST00000560970 TBC1D14Q9P2M4 693 aa11.35□□□□□ -0.59
TPM1-227ENST00000560970 ARMCX3Q9UH62 379 aaPredicted RBP11.35□□□□□ -0.59
TPM1-227ENST00000560970 EVLQ9UI08 416 aaPredicted RBP11.35□□□□□ -0.59
TPM1-227ENST00000560970 A8MXQ7 604 aa11.34□□□□□ -0.59
TPM1-227ENST00000560970 PATE3B3GLJ2 98 aa11.34□□□□□ -0.59
TPM1-227ENST00000560970 SGK1O00141 431 aa11.34□□□□□ -0.59
TPM1-227ENST00000560970 RTN3O95197 1032 aaPredicted RBP11.34□□□□□ -0.59
TPM1-227ENST00000560970 MBD3O95983 291 aa11.34□□□□□ -0.59
TPM1-227ENST00000560970 HNRNPLP14866 589 aaKnown RBP eCLIP11.34□□□□□ -0.594e-7■■□□□ 13.3
TPM1-227ENST00000560970 CSRP1P21291 193 aaKnown RBP11.34□□□□□ -0.59
TPM1-227ENST00000560970 TIE1P35590 1138 aa11.34□□□□□ -0.59
TPM1-227ENST00000560970 GNL1P36915 607 aaPredicted RBP11.34□□□□□ -0.59
TPM1-227ENST00000560970 DPP6P42658 865 aa11.34□□□□□ -0.59
TPM1-227ENST00000560970 TUBP50607 506 aa11.34□□□□□ -0.59
TPM1-227ENST00000560970 MARSP56192 900 aaKnown RBP11.34□□□□□ -0.59
TPM1-227ENST00000560970 LMAN2Q12907 356 aa11.34□□□□□ -0.59
TPM1-227ENST00000560970 FOXC1Q12948 553 aa11.34□□□□□ -0.59
TPM1-227ENST00000560970 ORC1Q13415 861 aa11.34□□□□□ -0.59
TPM1-227ENST00000560970 SGSM1Q2NKQ1 1148 aa11.34□□□□□ -0.59
TPM1-227ENST00000560970 SKOR2Q2VWA4 1001 aaPredicted RBP11.34□□□□□ -0.59
TPM1-227ENST00000560970 TMEM92Q6UXU6 159 aa11.34□□□□□ -0.59
TPM1-227ENST00000560970 LPCAT2Q7L5N7 544 aa11.34□□□□□ -0.59
TPM1-227ENST00000560970 FAM35AQ86V20 835 aa11.34□□□□□ -0.59
TPM1-227ENST00000560970 IRF2BP1Q8IU81 584 aa11.34□□□□□ -0.59
TPM1-227ENST00000560970 TRIM59Q8IWR1 403 aa11.34□□□□□ -0.59
TPM1-227ENST00000560970 TXNDC5Q8NBS9 432 aaKnown RBP11.34□□□□□ -0.59
TPM1-227ENST00000560970 FBXO32Q969P5 355 aa11.34□□□□□ -0.59
TPM1-227ENST00000560970 OTUB2Q96DC9 234 aa11.34□□□□□ -0.59
TPM1-227ENST00000560970 SMARCD1Q96GM5 515 aa11.34□□□□□ -0.59
TPM1-227ENST00000560970 ZFRQ96KR1 1074 aaKnown RBP11.34□□□□□ -0.59
TPM1-227ENST00000560970 ADAM33Q9BZ11 813 aa11.34□□□□□ -0.59
TPM1-227ENST00000560970 RNF38Q9H0F5 515 aa11.34□□□□□ -0.59
TPM1-227ENST00000560970 DMAP1Q9NPF5 467 aaPredicted RBP11.34□□□□□ -0.59
TPM1-227ENST00000560970 RAB20Q9NX57 234 aa11.34□□□□□ -0.59
TPM1-227ENST00000560970 TMEM131Q92545 1883 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms