RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 CMTM8Q8IZV2 173 aa12.85□□□□□ -0.35
USP8-209ENST00000560297 PLCD3Q8N3E9 789 aa12.85□□□□□ -0.35
USP8-209ENST00000560297 MAB21L3Q8N8X9 362 aa12.85□□□□□ -0.35
USP8-209ENST00000560297 CLEC4CQ8WTT0 213 aa12.85□□□□□ -0.35
USP8-209ENST00000560297 RNF139Q8WU17 664 aa12.85□□□□□ -0.35
USP8-209ENST00000560297 ING5Q8WYH8 240 aa12.85□□□□□ -0.35
USP8-209ENST00000560297 NDRG1Q92597 394 aaKnown RBP12.85□□□□□ -0.35
USP8-209ENST00000560297 FAM149B1Q96BN6 582 aa12.85□□□□□ -0.35
USP8-209ENST00000560297 SLC46A2Q9BY10 475 aa12.85□□□□□ -0.35
USP8-209ENST00000560297 NMUR1Q9HB89 426 aa12.85□□□□□ -0.35
USP8-209ENST00000560297 POPDC2Q9HBU9 364 aa12.85□□□□□ -0.35
USP8-209ENST00000560297 LUC7LQ9NQ29 371 aaKnown RBP12.85□□□□□ -0.35
USP8-209ENST00000560297 PARVAQ9NVD7 372 aa12.85□□□□□ -0.35
USP8-209ENST00000560297 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.85□□□□□ -0.35
USP8-209ENST00000560297 TMEM51Q9NW97 253 aa12.85□□□□□ -0.35
USP8-209ENST00000560297 OSER1Q9NX31 292 aa12.85□□□□□ -0.35
USP8-209ENST00000560297 TJP2Q9UDY2 1190 aa12.85□□□□□ -0.35
USP8-209ENST00000560297 DNMT3LQ9UJW3 386 aa12.85□□□□□ -0.35
USP8-209ENST00000560297 EPN1Q9Y6I3 576 aaPredicted RBP12.85□□□□□ -0.35
USP8-209ENST00000560297 BRWD1Q9NSI6 2320 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 ANKRD62A6NC57 917 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 SIGLEC16A6NMB1 481 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 EIF3CLB5ME19 914 aaKnown RBP12.84□□□□□ -0.35
USP8-209ENST00000560297 CAPN9O14815 690 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 LCA5LO95447 670 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 OAS1P00973 400 aaKnown RBP12.84□□□□□ -0.35
USP8-209ENST00000560297 KRT3P12035 628 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 LAMP2P13473 410 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 NCAM1P13591 858 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 AVPR1AP37288 418 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 PGFP49763 221 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 GPC5P78333 572 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 C2CD6Q53TS8 623 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 C10orf120Q5SQS8 335 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 FAM102AQ5T9C2 384 aaPredicted RBP12.84□□□□□ -0.35
USP8-209ENST00000560297 RSRC2Q7L4I2 434 aaKnown RBP12.84□□□□□ -0.35
USP8-209ENST00000560297 C3orf20Q8ND61 904 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 KHSRPQ92945 711 aaKnown RBP eCLIP12.84□□□□□ -0.35
USP8-209ENST00000560297 E2F7Q96AV8 911 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 EIF3CQ99613 913 aaKnown RBP12.84□□□□□ -0.35
USP8-209ENST00000560297 SELENOOQ9BVL4 669 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 NACA2Q9H009 215 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 TRPV4Q9HBA0 871 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 TRPC7Q9HCX4 862 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 MRPL47Q9HD33 250 aaKnown RBP12.84□□□□□ -0.35
USP8-209ENST00000560297 RRN3Q9NYV6 651 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 EPS15L1Q9UBC2 864 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 PRKAG3Q9UGI9 489 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 INTUQ9ULD6 942 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 NENFQ9UMX5 172 aa12.84□□□□□ -0.35
USP8-209ENST00000560297 C2orf78A6NCI8 922 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 SOWAHDA6NJG2 315 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 GOLGA8SH3BPF8 625 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 NRG2O14511 850 aaPredicted RBP12.83□□□□□ -0.36
USP8-209ENST00000560297 COCHO43405 550 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 NDUFA10O95299 355 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 OLFM2O95897 454 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 PTMAP06454 111 aaKnown RBP12.83□□□□□ -0.36
USP8-209ENST00000560297 H2AFZP0C0S5 128 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 RRM1P23921 792 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 NOS2P35228 1153 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 KPNA1P52294 538 aaPredicted RBP12.83□□□□□ -0.36
USP8-209ENST00000560297 GALCP54803 685 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 RNASE9P60153 205 aaKnown RBP12.83□□□□□ -0.36
USP8-209ENST00000560297 SLC7A9P82251 487 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 CCDC173Q0VFZ6 552 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 PLEKHA7Q6IQ23 1121 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 DNAJC24Q6P3W2 148 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 HFE2Q6ZVN8 426 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 H2AFVQ71UI9 128 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 TMEM139Q8IV31 216 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 ARID3BQ8IVW6 561 aaPredicted RBP12.83□□□□□ -0.36
USP8-209ENST00000560297 ARL14EPQ8N8R7 260 aaPredicted RBP12.83□□□□□ -0.36
USP8-209ENST00000560297 TDRD5Q8NAT2 981 aaKnown RBP12.83□□□□□ -0.36
USP8-209ENST00000560297 ZSCAN18Q8TBC5 510 aaPredicted RBP12.83□□□□□ -0.36
USP8-209ENST00000560297 EDEM1Q92611 657 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 SMARCD2Q92925 531 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 NXPE3Q969Y0 559 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 ZSWIM3Q96MP5 696 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 ASB2Q96Q27 587 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 SLC2A13Q96QE2 648 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 MYADMQ96S97 322 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 CYP2S1Q96SQ9 504 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 RNF38Q9H0F5 515 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 CCSER2Q9H7U1 834 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 SPTLC3Q9NUV7 552 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 TDP1Q9NUW8 608 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 CNOT8Q9UFF9 292 aaKnown RBP12.83□□□□□ -0.36
USP8-209ENST00000560297 TMEM59LQ9UK28 342 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 SCINQ9Y6U3 715 aa12.83□□□□□ -0.36
USP8-209ENST00000560297 TCRBV5S1A1TA0A578 114 aa12.82□□□□□ -0.36
USP8-209ENST00000560297 FAM170AA1A519 330 aa12.82□□□□□ -0.36
USP8-209ENST00000560297 DPYSL4O14531 572 aa12.82□□□□□ -0.36
USP8-209ENST00000560297 ARHGAP6O43182 974 aa12.82□□□□□ -0.36
USP8-209ENST00000560297 DAB1O75553 588 aa12.82□□□□□ -0.36
USP8-209ENST00000560297 GRAP2O75791 330 aa12.82□□□□□ -0.36
USP8-209ENST00000560297 TBX18O95935 607 aa12.82□□□□□ -0.36
USP8-209ENST00000560297 CYP1A2P05177 515 aa12.82□□□□□ -0.36
USP8-209ENST00000560297 FYNP06241 537 aa12.82□□□□□ -0.36
USP8-209ENST00000560297 CKMP06732 381 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms