RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 NOS2P35228 1153 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 GJC1P36383 396 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 PGFP49763 221 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 DNA2P51530 1060 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 ZNF143P52747 638 aaPredicted RBP10.91□□□□□ -0.66
TPM1-221ENST00000559831 ZNF252P-AS1Q0IIN9 211 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 HYAL1Q12794 435 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 C15orf59Q2T9L4 293 aaPredicted RBP10.91□□□□□ -0.66
TPM1-221ENST00000559831 CCDC14Q49A88 953 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 DAB2IPQ5VWQ8 1189 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 SYPL2Q5VXT5 272 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 C11orf63Q6NUN7 778 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 NYAP1Q6ZVC0 841 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 RSRC2Q7L4I2 434 aaKnown RBP10.91□□□□□ -0.66
TPM1-221ENST00000559831 PEX26Q7Z412 305 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 MON1AQ86VX9 555 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 HS6ST3Q8IZP7 471 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 SYCE1Q8N0S2 351 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 MICALL1Q8N3F8 863 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 LRRC57Q8N9N7 239 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 VN1R2Q8NFZ6 395 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.91□□□□□ -0.66
TPM1-221ENST00000559831 RNF139Q8WU17 664 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 HDAC7Q8WUI4 952 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 CASP10Q92851 521 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 TRMT2BQ96GJ1 504 aaKnown RBP10.91□□□□□ -0.66
TPM1-221ENST00000559831 SLC2A13Q96QE2 648 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 TBCBQ99426 244 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 CORO1BQ9BR76 489 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 DDX23Q9BUQ8 820 aaKnown RBP10.91□□□□□ -0.66
TPM1-221ENST00000559831 TRIM62Q9BVG3 475 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 NMUR1Q9HB89 426 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 ABCC13Q9NSE7 274 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 TRPM5Q9NZQ8 1165 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 COX16Q9P0S2 106 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 UXTQ9UBK9 157 aaPredicted RBP10.91□□□□□ -0.66
TPM1-221ENST00000559831 LCMT1Q9UIC8 334 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 NUDT5Q9UKK9 219 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 AMFRQ9UKV5 643 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 STAP1Q9ULZ2 295 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 FAM92AA1XBS5 289 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 DPYSL4O14531 572 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 LINC01565O15544 149 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 NCK2O43639 380 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 ZNF500O60304 480 aaPredicted RBP10.9□□□□□ -0.66
TPM1-221ENST00000559831 XYLBO75191 536 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 RNF8O76064 485 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 FYNP06241 537 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 HNRNPA1P09651 372 aaKnown RBP eCLIP10.9□□□□□ -0.66
TPM1-221ENST00000559831 RALAP11233 206 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 MYL4P12829 197 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 RARGP13631 454 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 TFE3P19532 575 aaPredicted RBP10.9□□□□□ -0.66
TPM1-221ENST00000559831 COMTP21964 271 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 MAN1A1P33908 653 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 MATKP42679 507 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 PSEN1P49768 467 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 PITX1P78337 314 aaPredicted RBP10.9□□□□□ -0.66
TPM1-221ENST00000559831 PIGHQ14442 188 aaPredicted RBP10.9□□□□□ -0.66
TPM1-221ENST00000559831 SH3PXD2AQ5TCZ1 1133 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 SYT10Q6XYQ8 523 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 RTL10Q7L3V2 364 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 ARCQ7LC44 396 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 C12orf76Q8N812 135 aaPredicted RBP10.9□□□□□ -0.66
TPM1-221ENST00000559831 PDZD8Q8NEN9 1154 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 ADAM32Q8TC27 787 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 FNIP1Q8TF40 1166 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 FAM172AQ8WUF8 416 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 OVCA2Q8WZ82 227 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 ZNF592Q92610 1267 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 MYRFLQ96LU7 910 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 GCNAQ96QF7 691 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 WDR24Q96S15 920 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 CNPY3Q9BT09 278 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 APOL5Q9BWW9 433 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 FAM204AQ9H8W3 233 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 PIDD1Q9HB75 910 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 ASAH2Q9NR71 780 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 HCFC1R1Q9NWW0 138 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 OSER1Q9NX31 292 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 DNAI1Q9UI46 699 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 PACSIN2Q9UNF0 486 aaPredicted RBP10.9□□□□□ -0.66
TPM1-221ENST00000559831 ALG6Q9Y672 507 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 NOTCH4Q99466 2003 aa10.9□□□□□ -0.66
TPM1-221ENST00000559831 CCDC195A0A1B0GUA6 201 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 M0QYT0 321 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 KIF2AO00139 706 aaPredicted RBP10.89□□□□□ -0.67
TPM1-221ENST00000559831 ENC1O14682 589 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 MDM4O15151 490 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 TADA3O75528 432 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 ZDHHC11BP0C7U3 371 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 SRGAP2BP0DMP2 458 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 PTPN2P17706 415 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 GABRR2P28476 465 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 HOXA9P31269 272 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 CASQ1P31415 396 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 SLC1A1P43005 524 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 PTPN9P43378 593 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 ETF1P62495 437 aaKnown RBP10.89□□□□□ -0.67
TPM1-221ENST00000559831 EFEMP1Q12805 493 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms