RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 KIR2DL1P43626 348 aaPredicted RBP21.64■■□□□ 1.05
TSPAN3-206ENST00000559373 MRPS21P82921 87 aaKnown RBP21.64■■□□□ 1.05
TSPAN3-206ENST00000559373 INCA1Q0VD86 236 aa21.64■■□□□ 1.05
TSPAN3-206ENST00000559373 INTS8Q75QN2 995 aaKnown RBP21.64■■□□□ 1.05
TSPAN3-206ENST00000559373 RASSF3Q86WH2 238 aa21.64■■□□□ 1.05
TSPAN3-206ENST00000559373 GUF1Q8N442 669 aaKnown RBP21.64■■□□□ 1.05
TSPAN3-206ENST00000559373 HMGB4Q8WW32 186 aa21.64■■□□□ 1.05
TSPAN3-206ENST00000559373 HNRNPABQ99729 332 aaKnown RBP21.64■■□□□ 1.05
TSPAN3-206ENST00000559373 NT5C1AQ9BXI3 368 aa21.64■■□□□ 1.05
TSPAN3-206ENST00000559373 KLF16Q9BXK1 252 aaPredicted RBP21.64■■□□□ 1.05
TSPAN3-206ENST00000559373 FBXO44Q9H4M3 255 aa21.64■■□□□ 1.05
TSPAN3-206ENST00000559373 COMMD8Q9NX08 183 aa21.64■■□□□ 1.05
TSPAN3-206ENST00000559373 BCCIPQ9P287 314 aaKnown RBP eCLIP21.64■■□□□ 1.05
TSPAN3-206ENST00000559373 GTF3C3Q9Y5Q9 886 aa21.64■■□□□ 1.05
TSPAN3-206ENST00000559373 PATE3B3GLJ2 98 aa21.63■■□□□ 1.05
TSPAN3-206ENST00000559373 GRIA2P42262 883 aa21.63■■□□□ 1.05
TSPAN3-206ENST00000559373 DHPSP49366 369 aaPredicted RBP21.63■■□□□ 1.05
TSPAN3-206ENST00000559373 TUBP50607 506 aa21.63■■□□□ 1.05
TSPAN3-206ENST00000559373 PPP1R26Q5T8A7 1209 aaPredicted RBP21.63■■□□□ 1.05
TSPAN3-206ENST00000559373 BTBD8Q5XKL5 378 aa21.63■■□□□ 1.05
TSPAN3-206ENST00000559373 ARMCX6Q7L4S7 300 aa21.63■■□□□ 1.05
TSPAN3-206ENST00000559373 PGBD3Q8N328 593 aa21.63■■□□□ 1.05
TSPAN3-206ENST00000559373 CCDC26Q8TAB7 109 aa21.63■■□□□ 1.05
TSPAN3-206ENST00000559373 CNOT6LQ96LI5 555 aaKnown RBP21.63■■□□□ 1.05
TSPAN3-206ENST00000559373 SCAND2PQ9GZW5 306 aaPredicted RBP21.63■■□□□ 1.05
TSPAN3-206ENST00000559373 VPS45Q9NRW7 570 aa21.63■■□□□ 1.05
TSPAN3-206ENST00000559373 HCN2Q9UL51 889 aa21.63■■□□□ 1.05
TSPAN3-206ENST00000559373 CACNA1BQ00975 2339 aa21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 A0A1W2PQ27 194 aa21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 A0A1W2PQ64 194 aa21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 A0A1W2PQD8 194 aa21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 BCLAF3A2AJT9 711 aaKnown RBP21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 NEDD8-MDP1E9PL57 170 aa21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 MAPK13O15264 365 aa21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 CILPO75339 1184 aa21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 ADRB1P08588 477 aa21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 RARGP13631 454 aa21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 RPL13P26373 211 aaKnown RBP21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 EIF2DP41214 584 aaKnown RBP21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 NFIL3Q16649 462 aa21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 ZCWPW2Q504Y3 356 aa21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 PMS2CLQ68D20 193 aa21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 RNF43Q68DV7 783 aa21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 MIB1Q86YT6 1006 aa21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 ETFBKMTQ8IXQ9 262 aa21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 DEFB119Q8N690 84 aa21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 KIAA1958Q8N8K9 716 aa21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 TATDN2Q93075 761 aa21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 ARID3AQ99856 593 aa21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 NIF3L1Q9GZT8 377 aa21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 SCML2Q9UQR0 700 aa21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 PCDHGA5Q9Y5G8 931 aa21.62■■□□□ 1.05
TSPAN3-206ENST00000559373 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.61■■□□□ 1.05
TSPAN3-206ENST00000559373 TCRBV21S2A2A0A5A6 115 aa21.61■■□□□ 1.05
TSPAN3-206ENST00000559373 GREM1O60565 184 aa21.61■■□□□ 1.05
TSPAN3-206ENST00000559373 ATP5C1P36542 298 aaKnown RBP21.61■■□□□ 1.05
TSPAN3-206ENST00000559373 TNFRSF4P43489 277 aa21.61■■□□□ 1.05
TSPAN3-206ENST00000559373 C10orf120Q5SQS8 335 aa21.61■■□□□ 1.05
TSPAN3-206ENST00000559373 C10orf76Q5T2E6 689 aa21.61■■□□□ 1.05
TSPAN3-206ENST00000559373 TOGARAM2Q6ZUX3 1019 aa21.61■■□□□ 1.05
TSPAN3-206ENST00000559373 TMEFF1Q8IYR6 380 aa21.61■■□□□ 1.05
TSPAN3-206ENST00000559373 OTUB2Q96DC9 234 aa21.61■■□□□ 1.05
TSPAN3-206ENST00000559373 HEXIM2Q96MH2 286 aaKnown RBP21.61■■□□□ 1.05
TSPAN3-206ENST00000559373 BBS2Q9BXC9 721 aa21.61■■□□□ 1.05
TSPAN3-206ENST00000559373 CYP3A43Q9HB55 503 aa21.61■■□□□ 1.05
TSPAN3-206ENST00000559373 TMEM8AQ9HCN3 771 aa21.61■■□□□ 1.05
TSPAN3-206ENST00000559373 DNAJC17Q9NVM6 304 aaKnown RBP21.61■■□□□ 1.05
TSPAN3-206ENST00000559373 PLK2Q9NYY3 685 aa21.61■■□□□ 1.05
TSPAN3-206ENST00000559373 DEC1Q9P2X7 70 aa21.61■■□□□ 1.05
TSPAN3-206ENST00000559373 NAGPAQ9UK23 515 aa21.61■■□□□ 1.05
TSPAN3-206ENST00000559373 A0A0A0MRY4 1105 aa21.6■■□□□ 1.05
TSPAN3-206ENST00000559373 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.6■■□□□ 1.05
TSPAN3-206ENST00000559373 TM4SF5O14894 197 aa21.6■■□□□ 1.05
TSPAN3-206ENST00000559373 FOXD2O60548 495 aaPredicted RBP21.6■■□□□ 1.05
TSPAN3-206ENST00000559373 HMBSP08397 361 aa21.6■■□□□ 1.05
TSPAN3-206ENST00000559373 EOGTQ5NDL2 527 aa21.6■■□□□ 1.05
TSPAN3-206ENST00000559373 HTR3DQ70Z44 454 aa21.6■■□□□ 1.05
TSPAN3-206ENST00000559373 SCD5Q86SK9 330 aa21.6■■□□□ 1.05
TSPAN3-206ENST00000559373 ZNF513Q8N8E2 541 aaPredicted RBP21.6■■□□□ 1.05
TSPAN3-206ENST00000559373 CCDC150Q8NCX0 1101 aa21.6■■□□□ 1.05
TSPAN3-206ENST00000559373 PIGKQ92643 395 aa21.6■■□□□ 1.05
TSPAN3-206ENST00000559373 ACOX2Q99424 681 aa21.6■■□□□ 1.05
TSPAN3-206ENST00000559373 EDEM2Q9BV94 578 aa21.6■■□□□ 1.05
TSPAN3-206ENST00000559373 CYLDQ9NQC7 956 aa21.6■■□□□ 1.05
TSPAN3-206ENST00000559373 MBD1Q9UIS9 605 aaPredicted RBP21.6■■□□□ 1.05
TSPAN3-206ENST00000559373 C4orf47A7E2U8 309 aa21.59■■□□□ 1.05
TSPAN3-206ENST00000559373 HOXC11O43248 304 aaPredicted RBP21.59■■□□□ 1.05
TSPAN3-206ENST00000559373 MAP3K13O43283 966 aa21.59■■□□□ 1.05
TSPAN3-206ENST00000559373 ALDH1A2O94788 518 aa21.59■■□□□ 1.05
TSPAN3-206ENST00000559373 TYRP14679 529 aa21.59■■□□□ 1.05
TSPAN3-206ENST00000559373 PRCPP42785 496 aa21.59■■□□□ 1.05
TSPAN3-206ENST00000559373 LIMK1P53667 647 aa21.59■■□□□ 1.05
TSPAN3-206ENST00000559373 N4BP2L1Q5TBK1 243 aaPredicted RBP21.59■■□□□ 1.05
TSPAN3-206ENST00000559373 EGFLAMQ63HQ2 1017 aa21.59■■□□□ 1.05
TSPAN3-206ENST00000559373 KRT39Q6A163 491 aa21.59■■□□□ 1.05
TSPAN3-206ENST00000559373 TERB1Q8NA31 727 aa21.59■■□□□ 1.05
TSPAN3-206ENST00000559373 P2RY11Q96G91 374 aa21.59■■□□□ 1.05
TSPAN3-206ENST00000559373 DUSP16Q9BY84 665 aa21.59■■□□□ 1.05
TSPAN3-206ENST00000559373 POLMQ9NP87 494 aaPredicted RBP21.59■■□□□ 1.05
TSPAN3-206ENST00000559373 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms