RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 SCAF4O95104 1147 aaKnown RBP2.57□□□□□ -2
GABPB1-209ENST00000559100 LARGE1O95461 756 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 VNN1O95497 513 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 WEE2P0C1S8 567 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 TBC1D3HP0C7X1 549 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 TMEM225BP0DP42 221 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 MED14OSP0DP75 135 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 MYCLP12524 364 aaPredicted RBP2.57□□□□□ -2
GABPB1-209ENST00000559100 CD19P15391 556 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 CFPP27918 469 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 THBS4P35443 961 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 GGT5P36269 586 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 ZEB1P37275 1124 aaPredicted RBP2.57□□□□□ -2
GABPB1-209ENST00000559100 POLD2P49005 469 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 MCM2P49736 904 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 TOB1P50616 345 aaPredicted RBP2.57□□□□□ -2
GABPB1-209ENST00000559100 ANXA11P50995 505 aaKnown RBP2.57□□□□□ -2
GABPB1-209ENST00000559100 CCR9P51686 369 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 ATXN1P54253 815 aaKnown RBP2.57□□□□□ -2
GABPB1-209ENST00000559100 LINC00310P59036 64 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 RPS7P62081 194 aaKnown RBP2.57□□□□□ -2
GABPB1-209ENST00000559100 RPP30P78346 268 aaKnown RBP2.57□□□□□ -2
GABPB1-209ENST00000559100 ADAM17P78536 824 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.57□□□□□ -2
GABPB1-209ENST00000559100 GOLGA8FQ08AF8 430 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 GALNT2Q10471 571 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 EIF2B5Q13144 721 aaKnown RBP2.57□□□□□ -2
GABPB1-209ENST00000559100 SEMA3BQ13214 749 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 TDGQ13569 410 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 CSRP2Q16527 193 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 CCNG2Q16589 344 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 NFIL3Q16649 462 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 TSTQ16762 297 aaKnown RBP2.57□□□□□ -2
GABPB1-209ENST00000559100 TBRG1Q3YBR2 411 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 TMEM196Q5HYL7 178 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 ZNF484Q5JVG2 852 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 CFAP58Q5T655 872 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 FAM102AQ5T9C2 384 aaPredicted RBP2.57□□□□□ -2
GABPB1-209ENST00000559100 TTC22Q5TAA0 569 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 MAP3K21Q5TCX8 1036 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 MFSD4BQ5TF39 518 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 TCERG1LQ5VWI1 586 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 SPATA1Q5VX52 437 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 SLFN13Q68D06 897 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 TBC1D3GQ6DHY5 549 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 DGAT2L7PQ6IED9 249 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 TBC1D3CQ6IPX1 549 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 ACAD10Q6JQN1 1059 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 SLC22A25Q6T423 547 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 CPLX4Q7Z7G2 160 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 TRABD2AQ86V40 505 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 C1QL4Q86Z23 238 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 ARMC8Q8IUR7 673 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 MAPKAPK5Q8IW41 473 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 SP8Q8IXZ3 490 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 TBC1D3Q8IZP1 549 aaPredicted RBP2.57□□□□□ -2
GABPB1-209ENST00000559100 TDRD7Q8NHU6 1098 aaKnown RBP2.57□□□□□ -2
GABPB1-209ENST00000559100 ZNF483Q8TF39 744 aaPredicted RBP2.57□□□□□ -2
GABPB1-209ENST00000559100 ERP27Q96DN0 273 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 RNF125Q96EQ8 232 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 REXO5Q96IC2 774 aaKnown RBP2.57□□□□□ -2
GABPB1-209ENST00000559100 LRIG1Q96JA1 1093 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 VPS50Q96JG6 964 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 FAM84AQ96KN4 292 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 NUDT22Q9BRQ3 303 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 C17orf80Q9BSJ5 609 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 CENPOQ9BU64 300 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 DPCDQ9BVM2 203 aaPredicted RBP2.57□□□□□ -2
GABPB1-209ENST00000559100 ACTRT3Q9BYD9 372 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 TWSG1Q9GZX9 223 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 SERHL2Q9H4I8 314 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 VEZTQ9HBM0 779 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 MSL2Q9HCI7 577 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 G6PC2Q9NQR9 355 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 TMEM160Q9NX00 188 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 CLIC5Q9NZA1 410 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 NKX1-2Q9UD57 310 aaPredicted RBP2.57□□□□□ -2
GABPB1-209ENST00000559100 STEAP1Q9UHE8 339 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 HSF4Q9ULV5 492 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 SORCS3Q9UPU3 1222 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 DRG1Q9Y295 367 aaKnown RBP2.57□□□□□ -2
GABPB1-209ENST00000559100 DNAJC16Q9Y2G8 782 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 SLC45A1Q9Y2W3 748 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 PCDHB7Q9Y5E2 793 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 SNX14Q9Y5W7 946 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 TRGV11A0A075B6L2 103 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 A0A087X0M5 115 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 PRAMEF33A0A0G2JMD5 474 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 A0A1B0GX30 115 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 VWA3AA6NCI4 1184 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 FAM90A18PA6NE21 464 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 FAM90A16PA6NEW6 464 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 OR2W5A6NFC9 320 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 PGPEP1LA6NFU8 196 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 AGAP5A6NIR3 686 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 FAM90A9PA6NNJ1 464 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 FAM90A5PA8MXJ8 464 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 B4DLN1 442 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 E7ENX8 843 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 AGPSO00116 658 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms