RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 MYOFQ9NZM1 2061 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 MIA3Q5JRA6 1907 aa12□□□□□ -0.49
SNX1-204ENST00000559061 A0A1W2PQJ5 194 aa12□□□□□ -0.49
SNX1-204ENST00000559061 DLL1O00548 723 aa12□□□□□ -0.49
SNX1-204ENST00000559061 ABL1P00519 1130 aa12□□□□□ -0.49
SNX1-204ENST00000559061 CKMP06732 381 aa12□□□□□ -0.49
SNX1-204ENST00000559061 ARSAP15289 507 aa12□□□□□ -0.49
SNX1-204ENST00000559061 PSMC3P17980 439 aa12□□□□□ -0.49
SNX1-204ENST00000559061 BPIFB4P59827 614 aa12□□□□□ -0.49
SNX1-204ENST00000559061 ARID5AQ03989 594 aa12□□□□□ -0.49
SNX1-204ENST00000559061 TNK2Q07912 1038 aa12□□□□□ -0.49
SNX1-204ENST00000559061 TBX2Q13207 712 aaPredicted RBP12□□□□□ -0.49
SNX1-204ENST00000559061 GAB4Q2WGN9 574 aa12□□□□□ -0.49
SNX1-204ENST00000559061 NAA35Q5VZE5 725 aa12□□□□□ -0.49
SNX1-204ENST00000559061 BSPRYQ5W0U4 402 aa12□□□□□ -0.49
SNX1-204ENST00000559061 TRIM68Q6AZZ1 485 aa12□□□□□ -0.49
SNX1-204ENST00000559061 KLHDC10Q6PID8 442 aa12□□□□□ -0.49
SNX1-204ENST00000559061 FAM183BPQ6ZVS7 135 aa12□□□□□ -0.49
SNX1-204ENST00000559061 ZNF571Q7Z3V5 609 aaPredicted RBP12□□□□□ -0.49
SNX1-204ENST00000559061 DNAAF5Q86Y56 855 aa12□□□□□ -0.49
SNX1-204ENST00000559061 CELF5Q8N6W0 485 aaKnown RBP12□□□□□ -0.49
SNX1-204ENST00000559061 BPIFB1Q8TDL5 484 aa12□□□□□ -0.49
SNX1-204ENST00000559061 CPA5Q8WXQ8 436 aa12□□□□□ -0.49
SNX1-204ENST00000559061 EDEM1Q92611 657 aa12□□□□□ -0.49
SNX1-204ENST00000559061 EDEM3Q9BZQ6 932 aa12□□□□□ -0.49
SNX1-204ENST00000559061 MIS12Q9H081 205 aa12□□□□□ -0.49
SNX1-204ENST00000559061 TAS2R14Q9NYV8 317 aa12□□□□□ -0.49
SNX1-204ENST00000559061 CLIC5Q9NZA1 410 aa12□□□□□ -0.49
SNX1-204ENST00000559061 CALCOCO1Q9P1Z2 691 aa12□□□□□ -0.49
SNX1-204ENST00000559061 ZMYM5Q9UJ78 669 aa12□□□□□ -0.49
SNX1-204ENST00000559061 NAGPAQ9UK23 515 aa12□□□□□ -0.49
SNX1-204ENST00000559061 CAPN11Q9UMQ6 739 aa12□□□□□ -0.49
SNX1-204ENST00000559061 TCRBV5S1A1TA0A578 114 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 FAM86C2PA6NEL3 165 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 LSM8O95777 96 aaKnown RBP11.99□□□□□ -0.49
SNX1-204ENST00000559061 KLKB1P03952 638 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 PLEKP08567 350 aaPredicted RBP11.99□□□□□ -0.49
SNX1-204ENST00000559061 MBL2P11226 248 aaPredicted RBP11.99□□□□□ -0.49
SNX1-204ENST00000559061 SKILP12757 684 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 GDI1P31150 447 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 AVPR1AP37288 418 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 PRKCIP41743 596 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 GABRB2P47870 512 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 EIF4EBP2Q13542 120 aaPredicted RBP11.99□□□□□ -0.49
SNX1-204ENST00000559061 ARID5BQ14865 1188 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 MTF1Q14872 753 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 SYPL2Q5VXT5 272 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 NAIF1Q69YI7 327 aaPredicted RBP11.99□□□□□ -0.49
SNX1-204ENST00000559061 MSANTD2Q6P1R3 559 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 CACNA2D4Q7Z3S7 1137 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 ZNF677Q86XU0 584 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 XYLT1Q86Y38 959 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 ZNF687Q8N1G0 1237 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 SIX6OS1Q8N1H7 587 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 DEPDC1BQ8WUY9 529 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 IRGQQ8WZA9 623 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 PPP1R13BQ96KQ4 1090 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 AGPAT1Q99943 283 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 LINC00597Q9H2U6 94 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 KIF9Q9HAQ2 790 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 ST7Q9NRC1 585 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 CFAP97Q9P2B7 532 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 NENFQ9UMX5 172 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 WNT6Q9Y6F9 365 aa11.99□□□□□ -0.49
SNX1-204ENST00000559061 DDX3XO00571 662 aaKnown RBP eCLIP11.98□□□□□ -0.49
SNX1-204ENST00000559061 CHADO15335 359 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 MSI1O43347 362 aaKnown RBP11.98□□□□□ -0.49
SNX1-204ENST00000559061 FBXO21O94952 628 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 GJB6O95452 261 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 IGLV3-25P01717 112 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 IGLV3-27P01718 113 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 LTFP02788 710 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 FERP16591 822 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 TFE3P19532 575 aaPredicted RBP11.98□□□□□ -0.49
SNX1-204ENST00000559061 MMP8P22894 467 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 CASP14P31944 242 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 KRT9P35527 623 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 SOX9P48436 509 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 PSEN1P49768 467 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 SLC8A3P57103 927 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 CENPCQ03188 943 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 SIGLEC14Q08ET2 396 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 CLEC16AQ2KHT3 1053 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 EML3Q32P44 896 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 CWF19L1Q69YN2 538 aaKnown RBP11.98□□□□□ -0.49
SNX1-204ENST00000559061 WDR59Q6PJI9 974 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 Q6ZNB5 142 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 TRIM67Q6ZTA4 783 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 UBALD2Q8IYN6 164 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 SLC30A5Q8TAD4 765 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 SLC2A13Q96QE2 648 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 TRMT61BQ9BVS5 477 aaKnown RBP11.98□□□□□ -0.49
SNX1-204ENST00000559061 HAUS4Q9H6D7 363 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 GTSE1Q9NYZ3 720 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 SFMBT1Q9UHJ3 866 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 NAALADL1Q9UQQ1 740 aa11.98□□□□□ -0.49
SNX1-204ENST00000559061 STC2O76061 302 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 HNRNPH3P31942 346 aaKnown RBP11.97□□□□□ -0.49
SNX1-204ENST00000559061 ATP5C1P36542 298 aaKnown RBP11.97□□□□□ -0.49
SNX1-204ENST00000559061 ACADSBP45954 432 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms