RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 CFAP57Q96MR6 1250 aa18.91■□□□□ 0.62
CLPX-203ENST00000558958 PRDM12Q9H4Q4 367 aa18.91■□□□□ 0.62
CLPX-203ENST00000558958 NSUN3Q9H649 340 aaKnown RBP18.91■□□□□ 0.62
CLPX-203ENST00000558958 TLR8Q9NR97 1041 aaKnown RBP18.91■□□□□ 0.62
CLPX-203ENST00000558958 ABCC13Q9NSE7 274 aa18.91■□□□□ 0.62
CLPX-203ENST00000558958 OSER1Q9NX31 292 aa18.91■□□□□ 0.62
CLPX-203ENST00000558958 NAALADL1Q9UQQ1 740 aa18.91■□□□□ 0.62
CLPX-203ENST00000558958 ZNF638Q14966 1978 aaKnown RBP18.91■□□□□ 0.62
CLPX-203ENST00000558958 CAPN9O14815 690 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 RFPL2O75678 378 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 TUBB4AP04350 444 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 HNRNPA1P09651 372 aaKnown RBP eCLIP18.9■□□□□ 0.62
CLPX-203ENST00000558958 NCAM1P13591 858 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 GTF2F1P35269 517 aaKnown RBP eCLIP18.9■□□□□ 0.627e-13■■■□□ 17.6
CLPX-203ENST00000558958 PTPN9P43378 593 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 PSEN1P49768 467 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 GRIN2CQ14957 1233 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 SYPL2Q5VXT5 272 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 BTBD8Q5XKL5 378 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 ELMSAN1Q6PJG2 1045 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 CPNE8Q86YQ8 564 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 ELMOD1Q8N336 334 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 PDZD8Q8NEN9 1154 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 EDEM1Q92611 657 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 ZNF512Q96ME7 567 aaPredicted RBP18.9■□□□□ 0.62
CLPX-203ENST00000558958 CLIC5Q9NZA1 410 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 UXTQ9UBK9 157 aaPredicted RBP18.9■□□□□ 0.62
CLPX-203ENST00000558958 KIF2AO00139 706 aaPredicted RBP18.9■□□□□ 0.62
CLPX-203ENST00000558958 CCL16O15467 120 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 FTCDO95954 541 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 COMTP21964 271 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 SLC1A1P43005 524 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 RBM10P98175 930 aaKnown RBP18.9■□□□□ 0.62
CLPX-203ENST00000558958 ACAP1Q15027 740 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 C15orf59Q2T9L4 293 aaPredicted RBP18.9■□□□□ 0.62
CLPX-203ENST00000558958 SLC25A52Q3SY17 297 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 TCEAL5Q5H9L2 206 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 SNX30Q5VWJ9 437 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 NT5DC3Q86UY8 548 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 VN1R2Q8NFZ6 395 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.9■□□□□ 0.62
CLPX-203ENST00000558958 CENPIQ92674 756 aaPredicted RBP18.9■□□□□ 0.62
CLPX-203ENST00000558958 NPY6RQ99463 290 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 ZNF334Q9HCZ1 680 aaPredicted RBP18.9■□□□□ 0.62
CLPX-203ENST00000558958 ZDHHC7Q9NXF8 308 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 RRN3Q9NYV6 651 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 HYOU1Q9Y4L1 999 aa18.9■□□□□ 0.62
CLPX-203ENST00000558958 MYO16Q9Y6X6 1858 aa18.89■□□□□ 0.61
CLPX-203ENST00000558958 FANCGO15287 622 aa18.89■□□□□ 0.61
CLPX-203ENST00000558958 POU2F2P09086 479 aa18.89■□□□□ 0.61
CLPX-203ENST00000558958 TFE3P19532 575 aaPredicted RBP18.89■□□□□ 0.61
CLPX-203ENST00000558958 PPP3CCP48454 512 aa18.89■□□□□ 0.61
CLPX-203ENST00000558958 ATP11AP98196 1134 aa18.89■□□□□ 0.61
CLPX-203ENST00000558958 HYAL1Q12794 435 aa18.89■□□□□ 0.61
CLPX-203ENST00000558958 SH3PXD2AQ5TCZ1 1133 aa18.89■□□□□ 0.61
CLPX-203ENST00000558958 SYT10Q6XYQ8 523 aa18.89■□□□□ 0.61
CLPX-203ENST00000558958 PEX26Q7Z412 305 aa18.89■□□□□ 0.61
CLPX-203ENST00000558958 ARFGAP1Q8N6T3 406 aa18.89■□□□□ 0.61
CLPX-203ENST00000558958 LRRC3Q9BY71 257 aa18.89■□□□□ 0.61
CLPX-203ENST00000558958 ADAM33Q9BZ11 813 aa18.89■□□□□ 0.61
CLPX-203ENST00000558958 IL21Q9HBE4 155 aa18.89■□□□□ 0.61
CLPX-203ENST00000558958 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.89■□□□□ 0.61
CLPX-203ENST00000558958 DNAI1Q9UI46 699 aa18.89■□□□□ 0.61
CLPX-203ENST00000558958 STAP1Q9ULZ2 295 aa18.89■□□□□ 0.61
CLPX-203ENST00000558958 JRKLQ9Y4A0 524 aa18.89■□□□□ 0.61
CLPX-203ENST00000558958 ZNF840PA6NDX5 716 aa18.88■□□□□ 0.61
CLPX-203ENST00000558958 PAPLNO95428 1278 aa18.88■□□□□ 0.61
CLPX-203ENST00000558958 F11P03951 625 aa18.88■□□□□ 0.61
CLPX-203ENST00000558958 TNNT1P13805 278 aa18.88■□□□□ 0.61
CLPX-203ENST00000558958 PITX1P78337 314 aaPredicted RBP18.88■□□□□ 0.61
CLPX-203ENST00000558958 MEI1Q5TIA1 1274 aa18.88■□□□□ 0.61
CLPX-203ENST00000558958 OTUD1Q5VV17 481 aaPredicted RBP18.88■□□□□ 0.61
CLPX-203ENST00000558958 DAB2IPQ5VWQ8 1189 aa18.88■□□□□ 0.61
CLPX-203ENST00000558958 BNIPLQ7Z465 357 aa18.88■□□□□ 0.61
CLPX-203ENST00000558958 TMEM150AQ86TG1 271 aa18.88■□□□□ 0.61
CLPX-203ENST00000558958 TMC8Q8IU68 726 aa18.88■□□□□ 0.61
CLPX-203ENST00000558958 ZNF276Q8N554 614 aa18.88■□□□□ 0.61
CLPX-203ENST00000558958 UBE2Q2Q8WVN8 375 aa18.88■□□□□ 0.61
CLPX-203ENST00000558958 TBCBQ99426 244 aa18.88■□□□□ 0.61
CLPX-203ENST00000558958 IGFLR1Q9H665 355 aa18.88■□□□□ 0.61
CLPX-203ENST00000558958 TRPM5Q9NZQ8 1165 aa18.88■□□□□ 0.61
CLPX-203ENST00000558958 AMFRQ9UKV5 643 aa18.88■□□□□ 0.61
CLPX-203ENST00000558958 USTQ9Y2C2 406 aa18.88■□□□□ 0.61
CLPX-203ENST00000558958 SPOPO43791 374 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 XYLBO75191 536 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 LRCH4O75427 683 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 TADA3O75528 432 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 RNF8O76064 485 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 ENDOD1O94919 500 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 RALAP11233 206 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 RARGP13631 454 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 DESP17661 470 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 POU3F3P20264 500 aaPredicted RBP18.87■□□□□ 0.61
CLPX-203ENST00000558958 SULT1E1P49888 294 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 CDO1Q16878 200 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 PABPC1LQ4VXU2 614 aaKnown RBP18.87■□□□□ 0.61
CLPX-203ENST00000558958 RAB6CQ53S08 254 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 ZNF697Q5TEC3 545 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 CC2D1AQ6P1N0 951 aaPredicted RBP18.87■□□□□ 0.61
CLPX-203ENST00000558958 MSANTD2Q6P1R3 559 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms