RNA–Protein interactions for RNA: ENST00000558659.5

CCDC33-205, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 2,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-205ENST00000558659 CDO1Q16878 200 aa13.12□□□□□ -0.31
CCDC33-205ENST00000558659 SLC5A9Q2M3M2 681 aa13.12□□□□□ -0.31
CCDC33-205ENST00000558659 DCAF6Q58WW2 860 aa13.12□□□□□ -0.31
CCDC33-205ENST00000558659 DCUN1D2Q6PH85 259 aa13.12□□□□□ -0.31
CCDC33-205ENST00000558659 GRASPQ7Z6J2 395 aaPredicted RBP13.12□□□□□ -0.31
CCDC33-205ENST00000558659 TMC8Q8IU68 726 aa13.12□□□□□ -0.31
CCDC33-205ENST00000558659 ARFGAP1Q8N6T3 406 aa13.12□□□□□ -0.31
CCDC33-205ENST00000558659 PPM1EQ8WY54 764 aa13.12□□□□□ -0.31
CCDC33-205ENST00000558659 CYP2S1Q96SQ9 504 aa13.12□□□□□ -0.31
CCDC33-205ENST00000558659 MAGEB5Q9BZ81 275 aa13.12□□□□□ -0.31
CCDC33-205ENST00000558659 CCSER2Q9H7U1 834 aa13.12□□□□□ -0.31
CCDC33-205ENST00000558659 COX16Q9P0S2 106 aa13.12□□□□□ -0.31
CCDC33-205ENST00000558659 SCML2Q9UQR0 700 aa13.12□□□□□ -0.31
CCDC33-205ENST00000558659 FAM92AA1XBS5 289 aa13.11□□□□□ -0.31
CCDC33-205ENST00000558659 C2orf78A6NCI8 922 aa13.11□□□□□ -0.31
CCDC33-205ENST00000558659 YWHAGP61981 247 aaKnown RBP eCLIP13.11□□□□□ -0.31
CCDC33-205ENST00000558659 YWHAZP63104 245 aaKnown RBP13.11□□□□□ -0.31
CCDC33-205ENST00000558659 CYP4F8P98187 520 aa13.11□□□□□ -0.31
CCDC33-205ENST00000558659 CLUL1Q15846 466 aa13.11□□□□□ -0.31
CCDC33-205ENST00000558659 CCDC14Q49A88 953 aa13.11□□□□□ -0.31
CCDC33-205ENST00000558659 ARHGAP29Q52LW3 1261 aa13.11□□□□□ -0.31
CCDC33-205ENST00000558659 OTUD1Q5VV17 481 aaPredicted RBP13.11□□□□□ -0.31
CCDC33-205ENST00000558659 SLC26A9Q7LBE3 791 aa13.11□□□□□ -0.31
CCDC33-205ENST00000558659 TPCN2Q8NHX9 752 aa13.11□□□□□ -0.31
CCDC33-205ENST00000558659 TSC1Q92574 1164 aa13.11□□□□□ -0.31
CCDC33-205ENST00000558659 ZNF512Q96ME7 567 aaPredicted RBP13.11□□□□□ -0.31
CCDC33-205ENST00000558659 SLC22A12Q96S37 553 aa13.11□□□□□ -0.31
CCDC33-205ENST00000558659 CDX2Q99626 313 aaPredicted RBP13.11□□□□□ -0.31
CCDC33-205ENST00000558659 PLEKHA4Q9H4M7 779 aa13.11□□□□□ -0.31
CCDC33-205ENST00000558659 AVENQ9NQS1 362 aaPredicted RBP13.11□□□□□ -0.31
CCDC33-205ENST00000558659 TMPRSS4Q9NRS4 437 aa13.11□□□□□ -0.31
CCDC33-205ENST00000558659 CLEC1BQ9P126 229 aa13.11□□□□□ -0.31
CCDC33-205ENST00000558659 HSFX1Q9UBD0 423 aa13.11□□□□□ -0.31
CCDC33-205ENST00000558659 SFMBT1Q9UHJ3 866 aa13.11□□□□□ -0.31
CCDC33-205ENST00000558659 INTUQ9ULD6 942 aa13.11□□□□□ -0.31
CCDC33-205ENST00000558659 STRIP2Q9ULQ0 834 aa13.11□□□□□ -0.31
CCDC33-205ENST00000558659 PACSIN2Q9UNF0 486 aaPredicted RBP13.11□□□□□ -0.31
CCDC33-205ENST00000558659 NCANO14594 1321 aa13.11□□□□□ -0.31
CCDC33-205ENST00000558659 A0A1W2PRU2 124 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 GRID2IPA4D2P6 1211 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 C2CD4BA6NLJ0 364 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 TBX10O75333 385 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 PALMO75781 387 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 LTFP02788 710 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 NCAM1P13591 858 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 PDGFRAP16234 1089 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 GTF2A1P52655 376 aaPredicted RBP13.1□□□□□ -0.31
CCDC33-205ENST00000558659 TAF12Q16514 161 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 TXNRD3NBQ6F5E7 133 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 SYCE2Q6PIF2 218 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 CCDC149Q6ZUS6 474 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 GUCD1Q96NT3 240 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 TTLL2Q9BWV7 592 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 RNF38Q9H0F5 515 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 CYLDQ9NQC7 956 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 MTCL1Q9Y4B5 1905 aaKnown RBP13.1□□□□□ -0.31
CCDC33-205ENST00000558659 ZNF840PA6NDX5 716 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 ZSCAN12O43309 604 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 MSI1O43347 362 aaKnown RBP13.1□□□□□ -0.31
CCDC33-205ENST00000558659 FTCDO95954 541 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 F11P03951 625 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 CSH1P0DML2 217 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 CSH2P0DML3 217 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 MYBL1P10243 752 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 MYL4P12829 197 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 TNNT1P13805 278 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 GABRR2P28476 465 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 LTBRP36941 435 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 CBX2Q14781 532 aaPredicted RBP13.1□□□□□ -0.31
CCDC33-205ENST00000558659 RARS2Q5T160 578 aaKnown RBP13.1□□□□□ -0.31
CCDC33-205ENST00000558659 TXNDC8Q6A555 127 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 WDR24Q96S15 920 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 USTQ9Y2C2 406 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 NOTCH4Q99466 2003 aa13.1□□□□□ -0.31
CCDC33-205ENST00000558659 SCAMP3O14828 347 aaKnown RBP13.09□□□□□ -0.31
CCDC33-205ENST00000558659 NCK2O43639 380 aa13.09□□□□□ -0.31
CCDC33-205ENST00000558659 KRT86O43790 486 aa13.09□□□□□ -0.31
CCDC33-205ENST00000558659 MOSPD3O75425 235 aa13.09□□□□□ -0.31
CCDC33-205ENST00000558659 RHOP08100 348 aa13.09□□□□□ -0.31
CCDC33-205ENST00000558659 DNA2P51530 1060 aa13.09□□□□□ -0.31
CCDC33-205ENST00000558659 GSCP56915 257 aaPredicted RBP13.09□□□□□ -0.31
CCDC33-205ENST00000558659 ZXDBP98169 803 aa13.09□□□□□ -0.31
CCDC33-205ENST00000558659 ADAM15Q13444 863 aa13.09□□□□□ -0.31
CCDC33-205ENST00000558659 VEPH1Q14D04 833 aa13.09□□□□□ -0.31
CCDC33-205ENST00000558659 EGFL6Q8IUX8 553 aa13.09□□□□□ -0.31
CCDC33-205ENST00000558659 DEFB123Q8N688 67 aa13.09□□□□□ -0.31
CCDC33-205ENST00000558659 MSANTD4Q8NCY6 345 aa13.09□□□□□ -0.31
CCDC33-205ENST00000558659 ING5Q8WYH8 240 aa13.09□□□□□ -0.31
CCDC33-205ENST00000558659 CASP10Q92851 521 aa13.09□□□□□ -0.31
CCDC33-205ENST00000558659 ACSF2Q96CM8 615 aaPredicted RBP13.09□□□□□ -0.31
CCDC33-205ENST00000558659 MYRFLQ96LU7 910 aa13.09□□□□□ -0.31
CCDC33-205ENST00000558659 C16orf45Q96MC5 204 aaPredicted RBP13.09□□□□□ -0.31
CCDC33-205ENST00000558659 TBCBQ99426 244 aa13.09□□□□□ -0.31
CCDC33-205ENST00000558659 PRKD2Q9BZL6 878 aa13.09□□□□□ -0.31
CCDC33-205ENST00000558659 SMG9Q9H0W8 520 aaKnown RBP13.09□□□□□ -0.31
CCDC33-205ENST00000558659 FBXO44Q9H4M3 255 aa13.09□□□□□ -0.31
CCDC33-205ENST00000558659 POPDC2Q9HBU9 364 aa13.09□□□□□ -0.31
CCDC33-205ENST00000558659 CLDND1Q9NY35 253 aa13.09□□□□□ -0.31
CCDC33-205ENST00000558659 WDR35Q9P2L0 1181 aa13.09□□□□□ -0.31
CCDC33-205ENST00000558659 PATJQ8NI35 1801 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms