RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 DAB2IPQ5VWQ8 1189 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 PMS2CLQ68D20 193 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 KRT39Q6A163 491 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 SPOPLQ6IQ16 392 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 KLHDC10Q6PID8 442 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 CYP2U1Q7Z449 544 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 TMEM25Q86YD3 366 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 BBS7Q8IWZ6 715 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 ZMIZ2Q8NF64 920 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 MDGA1Q8NFP4 955 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 CDK5RAP1Q96SZ6 601 aaKnown RBP14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 TMEM8AQ9HCN3 771 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 CYLDQ9NQC7 956 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 RMND1Q9NWS8 449 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 DNMT3LQ9UJW3 386 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 MYH10P35580 1976 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 GOLGA6L4A6NEF3 574 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 SGK1O00141 431 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 TM4SF5O14894 197 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 CETN3O15182 167 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 RALAP11233 206 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 CD58P19256 250 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 DHPSP49366 369 aaPredicted RBP14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 PPP3CAQ08209 521 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 EDRF1Q3B7T1 1238 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 C10orf120Q5SQS8 335 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 EMC10Q5UCC4 262 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 TMEM92Q6UXU6 159 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 CLEC20AQ6ZU45 233 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 C12orf40Q86WS4 652 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 ETFBKMTQ8IXQ9 262 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 ZNF513Q8N8E2 541 aaPredicted RBP14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 OLIG1Q8TAK6 271 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 TAS1R2Q8TE23 839 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 CHAMP1Q96JM3 812 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 HEXIM2Q96MH2 286 aaKnown RBP14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 CNTNAP3BQ96NU0 1288 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 LSM14BQ9BX40 385 aaKnown RBP14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 BBS2Q9BXC9 721 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 KLF16Q9BXK1 252 aaPredicted RBP14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 DUSP16Q9BY84 665 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 CNTNAP3Q9BZ76 1288 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 GTPBP4Q9BZE4 634 aaKnown RBP14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 FAM124BQ9H5Z6 455 aaPredicted RBP14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 MMRN2Q9H8L6 949 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 HMGXB4Q9UGU5 601 aa14.35□□□□□ -0.11
SNRPA1-204ENST00000558020 EML5Q05BV3 1969 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 CILPO75339 1184 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 TBX18O95935 607 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 TRIM49P0CI25 452 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 TRIM49CP0CI26 452 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 EPB41P11171 864 aaKnown RBP14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 RARGP13631 454 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 NTSR1P30989 418 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 P2RY2P41231 377 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 E2F5Q15329 346 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 C10orf76Q5T2E6 689 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 GRAMD4Q6IC98 578 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 ARHGAP18Q8N392 663 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 ZNF276Q8N554 614 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 TERB1Q8NA31 727 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 HMGB4Q8WW32 186 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 JAKMIP2Q96AA8 810 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 EDEM2Q9BV94 578 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 SMOC1Q9H4F8 434 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 RXFP3Q9NSD7 469 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 DNAJC17Q9NVM6 304 aaKnown RBP14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 CLIC5Q9NZA1 410 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 NAGPAQ9UK23 515 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 ZNF510Q9Y2H8 683 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 ZDHHC9Q9Y397 364 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 STARD13Q9Y3M8 1113 aa14.34□□□□□ -0.11
SNRPA1-204ENST00000558020 MYO16Q9Y6X6 1858 aa14.33□□□□□ -0.11
SNRPA1-204ENST00000558020 TCRBV21S2A2A0A5A6 115 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 NEDD8-MDP1E9PL57 170 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 CYP26A1O43174 497 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 PRR29P0C7W0 189 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 TYRP14679 529 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 KIF11P52732 1056 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 COG7P83436 770 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 MESP2Q0VG99 397 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 LMAN2Q12907 356 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 SLC36A4Q6YBV0 504 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 CCDC186Q7Z3E2 898 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 SFTPA1Q8IWL2 248 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 PHTF2Q8N3S3 785 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 FBXL13Q8NEE6 735 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 PIGKQ92643 395 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 TWNKQ96RR1 684 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 TSG101Q99816 390 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 UBXN6Q9BZV1 441 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 DCLK3Q9C098 648 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 APOBEC3GQ9HC16 384 aaKnown RBP14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 TMEM9BQ9NQ34 198 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 RAB20Q9NX57 234 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 HOOK1Q9UJC3 728 aaKnown RBP14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 LAMA1P25391 3075 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 MYOFQ9NZM1 2061 aa14.33□□□□□ -0.12
SNRPA1-204ENST00000558020 KIAA1549LQ6ZVL6 1849 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms