RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 HIST1H2AAQ96QV6 131 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 VKORC1Q9BQB6 163 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 GORASP1Q9BQQ3 440 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 USP44Q9H0E7 712 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 OR10A2Q9H208 303 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 EPC1Q9H2F5 836 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 SMARCAD1Q9H4L7 1026 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 STN1Q9H668 368 aaKnown RBP4.14□□□□□ -1.75
TDP1-217ENST00000557782 CCDC134Q9H6E4 229 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 RMI1Q9H9A7 625 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 PLEKHA2Q9HB19 425 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 SPON1Q9HCB6 807 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.14□□□□□ -1.75
TDP1-217ENST00000557782 RASAL2Q9UJF2 1139 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 PLA2G2DQ9UNK4 145 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 GTPBP10A4D1E9 387 aaKnown RBP4.13□□□□□ -1.75
TDP1-217ENST00000557782 GAGE10A6NGK3 116 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 NPIPB15A6NHN6 443 aaPredicted RBP4.13□□□□□ -1.75
TDP1-217ENST00000557782 SLC38A8A6NNN8 435 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 BTBD11A6QL63 1104 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 DCLK1O15075 740 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 ADAM23O75077 832 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 PGM3O95394 542 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 AFPP02771 609 aaKnown RBP4.13□□□□□ -1.75
TDP1-217ENST00000557782 H2AFB1P0C5Y9 115 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 H2AFB2P0C5Z0 115 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 FBLN1P23142 703 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 RBL1P28749 1068 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 EEF1DP29692 281 aaKnown RBP4.13□□□□□ -1.75
TDP1-217ENST00000557782 PPARGP37231 505 aaPredicted RBP4.13□□□□□ -1.75
TDP1-217ENST00000557782 MC3RP41968 323 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 DPP6P42658 865 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 PXNP49023 591 aaPredicted RBP4.13□□□□□ -1.75
TDP1-217ENST00000557782 MMP14P50281 582 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 DGKEP52429 567 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 CDH15P55291 814 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 ATP2C1P98194 919 aaPredicted RBP4.13□□□□□ -1.75
TDP1-217ENST00000557782 RNASELQ05823 741 aaKnown RBP4.13□□□□□ -1.75
TDP1-217ENST00000557782 GOLGA8FQ08AF8 430 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 MRPL49Q13405 166 aaKnown RBP4.13□□□□□ -1.75
TDP1-217ENST00000557782 TDGQ13569 410 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 UBXN2BQ14CS0 331 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 RTP5Q14D33 572 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 TBCCQ15814 346 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 NRN1LQ496H8 165 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 ODF2Q5BJF6 829 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 ZMAT1Q5H9K5 638 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 ATXN7L2Q5T6C5 722 aaPredicted RBP4.13□□□□□ -1.75
TDP1-217ENST00000557782 AGBL4Q5VU57 503 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 IL27RAQ6UWB1 636 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 FAM83HQ6ZRV2 1179 aaPredicted RBP4.13□□□□□ -1.75
TDP1-217ENST00000557782 LARP4Q71RC2 724 aaKnown RBP eCLIP4.13□□□□□ -1.75
TDP1-217ENST00000557782 B3GNT8Q7Z7M8 397 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 NBPF11Q86T75 865 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 VSIG10LQ86VR7 867 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 ZNF280BQ86YH2 543 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 CEP57L1Q8IYX8 460 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 LRRC71Q8N4P6 559 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 ZNF366Q8N895 744 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 PTGR2Q8N8N7 351 aaPredicted RBP4.13□□□□□ -1.75
TDP1-217ENST00000557782 LSM14AQ8ND56 463 aaKnown RBP4.13□□□□□ -1.75
TDP1-217ENST00000557782 FLCNQ8NFG4 579 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 LINS1Q8NG48 757 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 ZFP28Q8NHY6 868 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 DNAJB14Q8TBM8 379 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 PPP2R3CQ969Q6 453 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 ZNF653Q96CK0 615 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 PIGSQ96S52 555 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 EIF3CQ99613 913 aaKnown RBP4.13□□□□□ -1.75
TDP1-217ENST00000557782 NCAPGQ9BPX3 1015 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 C11orf84Q9BUA3 381 aaPredicted RBP4.13□□□□□ -1.75
TDP1-217ENST00000557782 PHF7Q9BWX1 381 aaPredicted RBP4.13□□□□□ -1.75
TDP1-217ENST00000557782 CARD11Q9BXL7 1154 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 TRIM5Q9C035 493 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 SYNPO2LQ9H987 977 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 ERVMER34-1Q9H9K5 563 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 IL21RQ9HBE5 538 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 BEX4Q9NWD9 120 aaPredicted RBP4.13□□□□□ -1.75
TDP1-217ENST00000557782 ALKBH4Q9NXW9 302 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 ETAA1Q9NY74 926 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 KCND2Q9NZV8 630 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 MTRRQ9UBK8 725 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 VPS51Q9UID3 782 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 SARDHQ9UL12 918 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 CORO1CQ9ULV4 474 aaPredicted RBP4.13□□□□□ -1.75
TDP1-217ENST00000557782 RAD54BQ9Y620 910 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 KDM3AQ9Y4C1 1321 aa4.13□□□□□ -1.75
TDP1-217ENST00000557782 GOLGA6L10A0A0M3HER8 536 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 HRKO00198 91 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 UBE2CO00762 179 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 SH2B2O14492 632 aaPredicted RBP4.12□□□□□ -1.75
TDP1-217ENST00000557782 TGFB1P01137 390 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 PRNPP04156 253 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 QDPRP09417 244 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 HK1P19367 917 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 KCNA3P22001 575 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 YY1P25490 414 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 ATP5DP30049 168 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 GCH1P30793 250 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 PRKAR1BP31321 381 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms