RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 SDHAF4Q5VUM1 108 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 BSPRYQ5W0U4 402 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 LLGL2Q6P1M3 1020 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 Q7L0L9 218 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 NIPA2Q8N8Q9 360 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 SMRP1Q8NCR6 262 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 FEZF2Q8TBJ5 459 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 MYLIPQ8WY64 445 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 SMG7Q92540 1137 aaKnown RBP11.8□□□□□ -0.52
FOXN3-212ENST00000556541 RIPOR3Q96MK2 946 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 GCNAQ96QF7 691 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 DDX23Q9BUQ8 820 aaKnown RBP11.8□□□□□ -0.52
FOXN3-212ENST00000556541 SELENOOQ9BVL4 669 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 WDR6Q9NNW5 1121 aaKnown RBP11.8□□□□□ -0.52
FOXN3-212ENST00000556541 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.8□□□□□ -0.52
FOXN3-212ENST00000556541 COG5Q9UP83 839 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 PPP2R2CQ9Y2T4 447 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 ZFP37Q9Y6Q3 630 aaPredicted RBP11.8□□□□□ -0.52
FOXN3-212ENST00000556541 DOCK8Q8NF50 2099 aa11.8□□□□□ -0.52
FOXN3-212ENST00000556541 KIF26AQ9ULI4 1882 aaPredicted RBP11.79□□□□□ -0.52
FOXN3-212ENST00000556541 CDH23Q9H251 3354 aa11.79□□□□□ -0.52
FOXN3-212ENST00000556541 C2CD4BA6NLJ0 364 aa11.79□□□□□ -0.52
FOXN3-212ENST00000556541 TMCO5BA8MYB1 307 aa11.79□□□□□ -0.52
FOXN3-212ENST00000556541 LINC01565O15544 149 aa11.79□□□□□ -0.52
FOXN3-212ENST00000556541 KRT86O43790 486 aa11.79□□□□□ -0.52
FOXN3-212ENST00000556541 ENDOD1O94919 500 aa11.79□□□□□ -0.52
FOXN3-212ENST00000556541 CSPG5O95196 566 aa11.79□□□□□ -0.52
FOXN3-212ENST00000556541 IGLV3-25P01717 112 aa11.79□□□□□ -0.52
FOXN3-212ENST00000556541 FYNP06241 537 aa11.79□□□□□ -0.52
FOXN3-212ENST00000556541 FOSL2P15408 326 aa11.79□□□□□ -0.52
FOXN3-212ENST00000556541 MAN1A1P33908 653 aa11.79□□□□□ -0.52
FOXN3-212ENST00000556541 KPNA1P52294 538 aaPredicted RBP11.79□□□□□ -0.52
FOXN3-212ENST00000556541 ZNF143P52747 638 aaPredicted RBP11.79□□□□□ -0.52
FOXN3-212ENST00000556541 EIF4EBP2Q13542 120 aaPredicted RBP11.79□□□□□ -0.52
FOXN3-212ENST00000556541 CES5AQ6NT32 575 aa11.79□□□□□ -0.52
FOXN3-212ENST00000556541 GAREM2Q75VX8 874 aa11.79□□□□□ -0.52
FOXN3-212ENST00000556541 PDZD4Q76G19 769 aaPredicted RBP11.79□□□□□ -0.52
FOXN3-212ENST00000556541 STRADAQ7RTN6 431 aa11.79□□□□□ -0.52
FOXN3-212ENST00000556541 KIAA1328Q86T90 577 aa11.79□□□□□ -0.52
FOXN3-212ENST00000556541 ACRBPQ8NEB7 543 aa11.79□□□□□ -0.52
FOXN3-212ENST00000556541 SUSD6Q92537 303 aa11.79□□□□□ -0.52
FOXN3-212ENST00000556541 MRPS31Q92665 395 aaKnown RBP11.79□□□□□ -0.52
FOXN3-212ENST00000556541 CENPIQ92674 756 aaPredicted RBP11.79□□□□□ -0.52
FOXN3-212ENST00000556541 PACSIN1Q9BY11 444 aa11.79□□□□□ -0.52
FOXN3-212ENST00000556541 SMOC2Q9H3U7 446 aa11.79□□□□□ -0.52
FOXN3-212ENST00000556541 IGFLR1Q9H665 355 aa11.79□□□□□ -0.52
FOXN3-212ENST00000556541 ZNF334Q9HCZ1 680 aaPredicted RBP11.79□□□□□ -0.52
FOXN3-212ENST00000556541 GMIPQ9P107 970 aa11.79□□□□□ -0.52
FOXN3-212ENST00000556541 STAP1Q9ULZ2 295 aa11.79□□□□□ -0.52
FOXN3-212ENST00000556541 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.79□□□□□ -0.52
FOXN3-212ENST00000556541 SPTBN5Q9NRC6 3674 aaKnown RBP11.78□□□□□ -0.52
FOXN3-212ENST00000556541 A0A1W2PQH9 124 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 SPDYE4A6NLX3 237 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 MOSPD3O75425 235 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 F9P00740 461 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 DESP17661 470 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 ABCB4P21439 1286 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 GABRR2P28476 465 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 SLC7A9P82251 487 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 RING1Q06587 406 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 PIGHQ14442 188 aaPredicted RBP11.78□□□□□ -0.52
FOXN3-212ENST00000556541 PUS10Q3MIT2 529 aaKnown RBP11.78□□□□□ -0.52
FOXN3-212ENST00000556541 SLC25A52Q3SY17 297 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 ARHGAP15Q53QZ3 475 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 ATAT1Q5SQI0 421 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 HECTD3Q5T447 861 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 ACBD5Q5T8D3 534 aaPredicted RBP11.78□□□□□ -0.52
FOXN3-212ENST00000556541 BTBD8Q5XKL5 378 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 C11orf63Q6NUN7 778 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 DCUN1D2Q6PH85 259 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 ZNF564Q8TBZ8 553 aaPredicted RBP11.78□□□□□ -0.52
FOXN3-212ENST00000556541 GPR152Q8TDT2 470 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 CLEC4CQ8WTT0 213 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 ARHGEF26Q96DR7 871 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 PIWIL1Q96J94 861 aaKnown RBP11.78□□□□□ -0.52
FOXN3-212ENST00000556541 NPY6RQ99463 290 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 CORO1BQ9BR76 489 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 CNPY3Q9BT09 278 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 NUP85Q9BW27 656 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 UBE2ZQ9H832 354 aaPredicted RBP11.78□□□□□ -0.52
FOXN3-212ENST00000556541 PIDD1Q9HB75 910 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 NMUR1Q9HB89 426 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 METTL5Q9NRN9 209 aaKnown RBP11.78□□□□□ -0.52
FOXN3-212ENST00000556541 CLDND1Q9NY35 253 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.78□□□□□ -0.52
FOXN3-212ENST00000556541 GDE1Q9NZC3 331 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 IP6K2Q9UHH9 426 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 CD207Q9UJ71 328 aa11.78□□□□□ -0.52
FOXN3-212ENST00000556541 MAGED2Q9UNF1 606 aaPredicted RBP11.78□□□□□ -0.52
FOXN3-212ENST00000556541 RCCD1A6NED2 376 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 MYO1FO00160 1098 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 TLR5O60602 858 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 RARGP13631 454 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 GPD1P21695 349 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 SDC4P31431 198 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 RFC1P35251 1148 aaPredicted RBP11.77□□□□□ -0.53
FOXN3-212ENST00000556541 FLT3P36888 993 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 SLC1A1P43005 524 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 AIF1P55008 147 aa11.77□□□□□ -0.53
FOXN3-212ENST00000556541 RBM10P98175 930 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms