RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 CALM3P0DP25 149 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 SMARCA1P28370 1054 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 METAP2P50579 478 aaKnown RBP eCLIP5.65□□□□□ -1.5
SRP54-211ENST00000556445 MANFP55145 182 aaKnown RBP5.65□□□□□ -1.5
SRP54-211ENST00000556445 SESN3P58005 492 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 HHEXQ03014 270 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 PPARAQ07869 468 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 ST3GAL1Q11201 340 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 MAN2A1Q16706 1144 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 KIAA0753Q2KHM9 967 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 SBK1Q52WX2 424 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 MIIPQ5JXC2 388 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 LMBRD2Q68DH5 695 aaPredicted RBP5.65□□□□□ -1.5
SRP54-211ENST00000556445 CAVIN1Q6NZI2 390 aaKnown RBP5.65□□□□□ -1.5
SRP54-211ENST00000556445 FAM111BQ6SJ93 734 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 FRMD7Q6ZUT3 714 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 DPP9Q86TI2 863 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 IQCA1Q86XH1 822 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 DZIP1Q86YF9 867 aaKnown RBP5.65□□□□□ -1.5
SRP54-211ENST00000556445 UNC5BQ8IZJ1 945 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 KRT78Q8N1N4 520 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 LCORLQ8N3X6 602 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 ZNF713Q8N859 430 aaPredicted RBP5.65□□□□□ -1.5
SRP54-211ENST00000556445 TDRD7Q8NHU6 1098 aaKnown RBP5.65□□□□□ -1.5
SRP54-211ENST00000556445 SLC30A5Q8TAD4 765 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 DIS3LQ8TF46 1054 aaKnown RBP5.65□□□□□ -1.5
SRP54-211ENST00000556445 USP13Q92995 863 aaPredicted RBP5.65□□□□□ -1.5
SRP54-211ENST00000556445 HPS3Q969F9 1004 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 NSUN4Q96CB9 384 aaKnown RBP5.65□□□□□ -1.5
SRP54-211ENST00000556445 ZMAT2Q96NC0 199 aaKnown RBP5.65□□□□□ -1.5
SRP54-211ENST00000556445 EYA3Q99504 573 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 NUDT16L1Q9BRJ7 211 aaKnown RBP5.65□□□□□ -1.5
SRP54-211ENST00000556445 UBAC1Q9BSL1 405 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 TTLL2Q9BWV7 592 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 APOL5Q9BWW9 433 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 LSM14BQ9BX40 385 aaKnown RBP5.65□□□□□ -1.5
SRP54-211ENST00000556445 TMEM60Q9H2L4 133 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 PRDM12Q9H4Q4 367 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 PLEKHA5Q9HAU0 1116 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 ARPP21Q9UBL0 812 aaPredicted RBP5.65□□□□□ -1.5
SRP54-211ENST00000556445 CDC23Q9UJX2 597 aa5.65□□□□□ -1.5
SRP54-211ENST00000556445 CACNA1SQ13698 1873 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 TNRC6CQ9HCJ0 1690 aaKnown RBP5.64□□□□□ -1.51
SRP54-211ENST00000556445 A0A087WV62 115 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 GTPBP10A4D1E9 387 aaKnown RBP5.64□□□□□ -1.51
SRP54-211ENST00000556445 GOLGA8AA7E2F4 631 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 TUSC2O75896 110 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 UFL1O94874 794 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 ARIH2O95376 493 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 LY86O95711 162 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 IL1R1P14778 569 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 XBP1P17861 261 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 ABCB4P21439 1286 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 KRT20P35900 424 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 PIK3CAP42336 1068 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 CCT2P78371 535 aaKnown RBP5.64□□□□□ -1.51
SRP54-211ENST00000556445 MECOMQ03112 1051 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 CD69Q07108 199 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 TRIM29Q14134 588 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 WTAPQ15007 396 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 CCDC38Q502W7 563 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 CCDC183Q5T5S1 534 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 KRT40Q6A162 431 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 APOA5Q6Q788 366 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 TBC1D10CQ8IV04 446 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 COLGALT2Q8IYK4 626 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 ZNF622Q969S3 477 aaKnown RBP eCLIP5.64□□□□□ -1.511e-6■■□□□ 13.2
SRP54-211ENST00000556445 KIAA1191Q96A73 305 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 MASTLQ96GX5 879 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 C8orf76Q96K31 380 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 UIMC1Q96RL1 719 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 BARD1Q99728 777 aaKnown RBP5.64□□□□□ -1.51
SRP54-211ENST00000556445 TCF25Q9BQ70 676 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 RIOK1Q9BRS2 568 aaKnown RBP5.64□□□□□ -1.51
SRP54-211ENST00000556445 LRRC2Q9BYS8 371 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 COA1Q9GZY4 146 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 LMAN2LQ9H0V9 348 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 WNT8AQ9H1J5 351 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 BHMT2Q9H2M3 363 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 GRPEL1Q9HAV7 217 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 ZCCHC17Q9NP64 241 aaKnown RBP5.64□□□□□ -1.51
SRP54-211ENST00000556445 RBM28Q9NW13 759 aaKnown RBP5.64□□□□□ -1.51
SRP54-211ENST00000556445 ING3Q9NXR8 418 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.64□□□□□ -1.51
SRP54-211ENST00000556445 ORC3Q9UBD5 711 aaPredicted RBP5.64□□□□□ -1.51
SRP54-211ENST00000556445 USP18Q9UMW8 372 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 NUMBLQ9Y6R0 609 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 NRXN2Q9P2S2 1712 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 STK36Q9NRP7 1315 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 NID2Q14112 1375 aa5.64□□□□□ -1.51
SRP54-211ENST00000556445 SYNDIG1LA6NDD5 238 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 B4E171 279 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 FAM227AF5H4B4 570 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 JAK2O60674 1132 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 TIPRLO75663 272 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 FSHBP01225 129 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 C1SP09871 688 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 CLEC2LP0C7M8 214 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 IFNAR1P17181 557 aa5.63□□□□□ -1.51
SRP54-211ENST00000556445 ELF1P32519 619 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms