RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 CYP26A1O43174 497 aa23.84■■□□□ 1.41
ACTN1-220ENST00000556433 TULP3O75386 442 aa23.84■■□□□ 1.41
ACTN1-220ENST00000556433 ALDH1A2O94788 518 aa23.84■■□□□ 1.41
ACTN1-220ENST00000556433 HNRNPLP14866 589 aaKnown RBP eCLIP23.84■■□□□ 1.416e-6■■□□□ 12.3
ACTN1-220ENST00000556433 LIMK1P53667 647 aa23.84■■□□□ 1.41
ACTN1-220ENST00000556433 EOGTQ5NDL2 527 aa23.84■■□□□ 1.41
ACTN1-220ENST00000556433 HTR3DQ70Z44 454 aa23.84■■□□□ 1.41
ACTN1-220ENST00000556433 C11orf74Q86VG3 221 aa23.84■■□□□ 1.41
ACTN1-220ENST00000556433 ETFBKMTQ8IXQ9 262 aa23.84■■□□□ 1.41
ACTN1-220ENST00000556433 PHTF2Q8N3S3 785 aa23.84■■□□□ 1.41
ACTN1-220ENST00000556433 MDGA1Q8NFP4 955 aa23.84■■□□□ 1.41
ACTN1-220ENST00000556433 NMUR1Q9HB89 426 aa23.84■■□□□ 1.41
ACTN1-220ENST00000556433 ZDHHC4Q9NPG8 344 aa23.84■■□□□ 1.41
ACTN1-220ENST00000556433 CYLDQ9NQC7 956 aa23.84■■□□□ 1.41
ACTN1-220ENST00000556433 DEC1Q9P2X7 70 aa23.84■■□□□ 1.41
ACTN1-220ENST00000556433 PCDHA5Q9Y5H7 936 aa23.84■■□□□ 1.41
ACTN1-220ENST00000556433 GTF3C3Q9Y5Q9 886 aa23.84■■□□□ 1.41
ACTN1-220ENST00000556433 MYH10P35580 1976 aa23.83■■□□□ 1.41
ACTN1-220ENST00000556433 CETN3O15182 167 aa23.83■■□□□ 1.41
ACTN1-220ENST00000556433 CHRM1P11229 460 aaPredicted RBP23.83■■□□□ 1.41
ACTN1-220ENST00000556433 MCCD1P59942 119 aaPredicted RBP23.83■■□□□ 1.41
ACTN1-220ENST00000556433 PNOCQ13519 176 aa23.83■■□□□ 1.41
ACTN1-220ENST00000556433 PREPLQ4J6C6 727 aaPredicted RBP23.83■■□□□ 1.41
ACTN1-220ENST00000556433 ZNF394Q53GI3 561 aa23.83■■□□□ 1.41
ACTN1-220ENST00000556433 DDX1Q92499 740 aaKnown RBP23.83■■□□□ 1.41
ACTN1-220ENST00000556433 SEMA4DQ92854 862 aa23.83■■□□□ 1.41
ACTN1-220ENST00000556433 HEXIM2Q96MH2 286 aaKnown RBP23.83■■□□□ 1.41
ACTN1-220ENST00000556433 DUSP16Q9BY84 665 aa23.83■■□□□ 1.41
ACTN1-220ENST00000556433 PNPLA8Q9NP80 782 aa23.83■■□□□ 1.41
ACTN1-220ENST00000556433 POLMQ9NP87 494 aaPredicted RBP23.83■■□□□ 1.41
ACTN1-220ENST00000556433 KIAA1549LQ6ZVL6 1849 aa23.82■■□□□ 1.4
ACTN1-220ENST00000556433 A0A1W2PQH9 124 aa23.82■■□□□ 1.4
ACTN1-220ENST00000556433 BCLAF3A2AJT9 711 aaKnown RBP23.82■■□□□ 1.4
ACTN1-220ENST00000556433 GREM1O60565 184 aa23.82■■□□□ 1.4
ACTN1-220ENST00000556433 CAVIN2O95810 425 aa23.82■■□□□ 1.4
ACTN1-220ENST00000556433 EPB41P11171 864 aaKnown RBP23.82■■□□□ 1.4
ACTN1-220ENST00000556433 RARGP13631 454 aa23.82■■□□□ 1.4
ACTN1-220ENST00000556433 KIF11P52732 1056 aa23.82■■□□□ 1.4
ACTN1-220ENST00000556433 GOLGA8FQ08AF8 430 aa23.82■■□□□ 1.4
ACTN1-220ENST00000556433 GOLGA8DPQ0D2H9 430 aa23.82■■□□□ 1.4
ACTN1-220ENST00000556433 PPP1R26Q5T8A7 1209 aaPredicted RBP23.82■■□□□ 1.4
ACTN1-220ENST00000556433 STPG1Q5TH74 334 aa23.82■■□□□ 1.4
ACTN1-220ENST00000556433 NUDT18Q6ZVK8 323 aa23.82■■□□□ 1.4
ACTN1-220ENST00000556433 ABCA7Q8IZY2 2146 aa23.82■■□□□ 1.4
ACTN1-220ENST00000556433 RAB20Q9NX57 234 aa23.82■■□□□ 1.4
ACTN1-220ENST00000556433 LSM7Q9UK45 103 aaKnown RBP23.82■■□□□ 1.4
ACTN1-220ENST00000556433 NUDT5Q9UKK9 219 aa23.82■■□□□ 1.4
ACTN1-220ENST00000556433 STX10O60499 249 aa23.81■■□□□ 1.4
ACTN1-220ENST00000556433 ADAM23O75077 832 aa23.81■■□□□ 1.4
ACTN1-220ENST00000556433 ADRB1P08588 477 aa23.81■■□□□ 1.4
ACTN1-220ENST00000556433 BCKDHBP21953 392 aa23.81■■□□□ 1.4
ACTN1-220ENST00000556433 KCNA4P22459 653 aa23.81■■□□□ 1.4
ACTN1-220ENST00000556433 MXI1P50539 228 aa23.81■■□□□ 1.4
ACTN1-220ENST00000556433 C10orf120Q5SQS8 335 aa23.81■■□□□ 1.4
ACTN1-220ENST00000556433 PMS2CLQ68D20 193 aa23.81■■□□□ 1.4
ACTN1-220ENST00000556433 TCEAL6Q6IPX3 200 aa23.81■■□□□ 1.4
ACTN1-220ENST00000556433 FMR1NBQ8N0W7 255 aaPredicted RBP23.81■■□□□ 1.4
ACTN1-220ENST00000556433 FBXL13Q8NEE6 735 aa23.81■■□□□ 1.4
ACTN1-220ENST00000556433 OLIG1Q8TAK6 271 aa23.81■■□□□ 1.4
ACTN1-220ENST00000556433 TCEAL3Q969E4 200 aa23.81■■□□□ 1.4
ACTN1-220ENST00000556433 FAXDC2Q96IV6 333 aa23.81■■□□□ 1.4
ACTN1-220ENST00000556433 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.81■■□□□ 1.4
ACTN1-220ENST00000556433 RMND1Q9NWS8 449 aa23.81■■□□□ 1.4
ACTN1-220ENST00000556433 BCCIPQ9P287 314 aaKnown RBP eCLIP23.81■■□□□ 1.4
ACTN1-220ENST00000556433 NAGPAQ9UK23 515 aa23.81■■□□□ 1.4
ACTN1-220ENST00000556433 CIZ1Q9ULV3 898 aaPredicted RBP23.81■■□□□ 1.4
ACTN1-220ENST00000556433 GOLGA6L4A6NEF3 574 aa23.8■■□□□ 1.4
ACTN1-220ENST00000556433 MDM4O15151 490 aa23.8■■□□□ 1.4
ACTN1-220ENST00000556433 TRIM24O15164 1050 aa23.8■■□□□ 1.4
ACTN1-220ENST00000556433 PRCPP42785 496 aa23.8■■□□□ 1.4
ACTN1-220ENST00000556433 PLA2G4AP47712 749 aa23.8■■□□□ 1.4
ACTN1-220ENST00000556433 C10orf76Q5T2E6 689 aa23.8■■□□□ 1.4
ACTN1-220ENST00000556433 KLHDC10Q6PID8 442 aa23.8■■□□□ 1.4
ACTN1-220ENST00000556433 SCD5Q86SK9 330 aa23.8■■□□□ 1.4
ACTN1-220ENST00000556433 PGBD3Q8N328 593 aa23.8■■□□□ 1.4
ACTN1-220ENST00000556433 TTC39CQ8N584 583 aa23.8■■□□□ 1.4
ACTN1-220ENST00000556433 KCNV2Q8TDN2 545 aa23.8■■□□□ 1.4
ACTN1-220ENST00000556433 RLN3Q8WXF3 142 aa23.8■■□□□ 1.4
ACTN1-220ENST00000556433 BBS2Q9BXC9 721 aa23.8■■□□□ 1.4
ACTN1-220ENST00000556433 CISHQ9NSE2 258 aa23.8■■□□□ 1.4
ACTN1-220ENST00000556433 WDR35Q9P2L0 1181 aa23.8■■□□□ 1.4
ACTN1-220ENST00000556433 DNMT3LQ9UJW3 386 aa23.8■■□□□ 1.4
ACTN1-220ENST00000556433 NEDD8-MDP1E9PL57 170 aa23.79■■□□□ 1.4
ACTN1-220ENST00000556433 PSEN1P49768 467 aa23.79■■□□□ 1.4
ACTN1-220ENST00000556433 RNF43Q68DV7 783 aa23.79■■□□□ 1.4
ACTN1-220ENST00000556433 GRAMD4Q6IC98 578 aa23.79■■□□□ 1.4
ACTN1-220ENST00000556433 TPGS1Q6ZTW0 290 aa23.79■■□□□ 1.4
ACTN1-220ENST00000556433 CCDC186Q7Z3E2 898 aa23.79■■□□□ 1.4
ACTN1-220ENST00000556433 TRMT11Q7Z4G4 463 aaKnown RBP23.79■■□□□ 1.4
ACTN1-220ENST00000556433 ZNF513Q8N8E2 541 aaPredicted RBP23.79■■□□□ 1.4
ACTN1-220ENST00000556433 TERB1Q8NA31 727 aa23.79■■□□□ 1.4
ACTN1-220ENST00000556433 HMGB4Q8WW32 186 aa23.79■■□□□ 1.4
ACTN1-220ENST00000556433 TATDN2Q93075 761 aa23.79■■□□□ 1.4
ACTN1-220ENST00000556433 TMEM176AQ96HP8 235 aa23.79■■□□□ 1.4
ACTN1-220ENST00000556433 XPO6Q96QU8 1125 aaKnown RBP23.79■■□□□ 1.4
ACTN1-220ENST00000556433 TSG101Q99816 390 aa23.79■■□□□ 1.4
ACTN1-220ENST00000556433 DNAJC17Q9NVM6 304 aaKnown RBP23.79■■□□□ 1.4
ACTN1-220ENST00000556433 USP3Q9Y6I4 520 aa23.79■■□□□ 1.4
ACTN1-220ENST00000556433 TCRBV21S2A2A0A5A6 115 aa23.78■■□□□ 1.4
ACTN1-220ENST00000556433 TM4SF5O14894 197 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms