RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 TULP3O75386 442 aa4.42□□□□□ -1.7
SNX6-204ENST00000555541 RNF8O76064 485 aa4.42□□□□□ -1.7
SNX6-204ENST00000555541 HSPA6P17066 643 aa4.42□□□□□ -1.7
SNX6-204ENST00000555541 KCNB1Q14721 858 aa4.42□□□□□ -1.7
SNX6-204ENST00000555541 ANO7Q6IWH7 933 aa4.42□□□□□ -1.7
SNX6-204ENST00000555541 METTL25Q8N6Q8 603 aa4.42□□□□□ -1.7
SNX6-204ENST00000555541 C12orf76Q8N812 135 aaPredicted RBP4.42□□□□□ -1.7
SNX6-204ENST00000555541 B4GALNT2Q8NHY0 566 aa4.42□□□□□ -1.7
SNX6-204ENST00000555541 IL31RAQ8NI17 732 aa4.42□□□□□ -1.7
SNX6-204ENST00000555541 MPLKIPQ8TAP9 179 aa4.42□□□□□ -1.7
SNX6-204ENST00000555541 JPH3Q8WXH2 748 aaPredicted RBP4.42□□□□□ -1.7
SNX6-204ENST00000555541 NMRK2Q9NPI5 230 aa4.42□□□□□ -1.7
SNX6-204ENST00000555541 ZNF180Q9UJW8 692 aa4.42□□□□□ -1.7
SNX6-204ENST00000555541 TMPRSS11DO60235 418 aa4.41□□□□□ -1.7
SNX6-204ENST00000555541 TBC1D4O60343 1298 aa4.41□□□□□ -1.7
SNX6-204ENST00000555541 SRGAP2O75044 1071 aa4.41□□□□□ -1.7
SNX6-204ENST00000555541 PRKAR1BP31321 381 aa4.41□□□□□ -1.7
SNX6-204ENST00000555541 HSF1Q00613 529 aa4.41□□□□□ -1.7
SNX6-204ENST00000555541 MFSD13AQ14CX5 517 aa4.41□□□□□ -1.7
SNX6-204ENST00000555541 ZNF549Q6P9A3 640 aa4.41□□□□□ -1.7
SNX6-204ENST00000555541 C18orf65Q6ZTR6 163 aa4.41□□□□□ -1.7
SNX6-204ENST00000555541 MPP5Q8N3R9 675 aa4.41□□□□□ -1.7
SNX6-204ENST00000555541 ACO2Q99798 780 aaKnown RBP4.41□□□□□ -1.7
SNX6-204ENST00000555541 ZNF518BQ9C0D4 1074 aa4.41□□□□□ -1.7
SNX6-204ENST00000555541 AGO4Q9HCK5 861 aaKnown RBP4.41□□□□□ -1.7
SNX6-204ENST00000555541 TMEM8AQ9HCN3 771 aa4.41□□□□□ -1.7
SNX6-204ENST00000555541 SEMA4BQ9NPR2 832 aaPredicted RBP4.41□□□□□ -1.7
SNX6-204ENST00000555541 SNX15Q9NRS6 342 aa4.41□□□□□ -1.7
SNX6-204ENST00000555541 ZSCAN32Q9NX65 697 aa4.41□□□□□ -1.7
SNX6-204ENST00000555541 FZD4Q9ULV1 537 aa4.41□□□□□ -1.7
SNX6-204ENST00000555541 USP19O94966 1318 aa4.41□□□□□ -1.7
SNX6-204ENST00000555541 A0A1W2PPL8 197 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 C16orf96A6NNT2 1141 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 C4orf47A7E2U8 309 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 EXOC5O00471 708 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 RRHO14718 337 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 TBX3O15119 743 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 RFPL1O75677 317 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 MBPP02686 304 aaPredicted RBP4.4□□□□□ -1.71
SNX6-204ENST00000555541 HGFP14210 728 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 RAB27AP51159 221 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 GPC5P78333 572 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 B4GALNT1Q00973 533 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 RAB32Q13637 225 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 FHL3Q13643 280 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 ZNF750Q32MQ0 723 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 SLC9C1Q4G0N8 1177 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 SWSAP1Q6NVH7 229 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 VSTM1Q6UX27 236 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 DAAM2Q86T65 1068 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 TPH2Q8IWU9 490 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 SLC35G2Q8TBE7 412 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 TAAR9Q96RI9 348 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 TM2D2Q9BX73 214 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 CDH19Q9H159 772 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 A1CFQ9NQ94 594 aaKnown RBP4.4□□□□□ -1.71
SNX6-204ENST00000555541 STK32BQ9NY57 414 aa4.4□□□□□ -1.71
SNX6-204ENST00000555541 ZNF814B7Z6K7 855 aa4.39□□□□□ -1.71
SNX6-204ENST00000555541 H7C4K7 107 aa4.39□□□□□ -1.71
SNX6-204ENST00000555541 FYB1O15117 783 aa4.39□□□□□ -1.71
SNX6-204ENST00000555541 RRP9O43818 475 aaKnown RBP4.39□□□□□ -1.71
SNX6-204ENST00000555541 IGBP1P78318 339 aa4.39□□□□□ -1.71
SNX6-204ENST00000555541 STIM1Q13586 685 aa4.39□□□□□ -1.71
SNX6-204ENST00000555541 DENND2CQ68D51 928 aa4.39□□□□□ -1.71
SNX6-204ENST00000555541 USP49Q70CQ1 688 aa4.39□□□□□ -1.71
SNX6-204ENST00000555541 EPM2AIP1Q7L775 607 aaPredicted RBP4.39□□□□□ -1.71
SNX6-204ENST00000555541 SPSB4Q96A44 273 aa4.39□□□□□ -1.71
SNX6-204ENST00000555541 LRGUKQ96M69 825 aa4.39□□□□□ -1.71
SNX6-204ENST00000555541 GATA5Q9BWX5 397 aaPredicted RBP4.39□□□□□ -1.71
SNX6-204ENST00000555541 RIMKLBQ9ULI2 386 aa4.39□□□□□ -1.71
SNX6-204ENST00000555541 TRIP12Q14669 1992 aaPredicted RBP4.38□□□□□ -1.71
SNX6-204ENST00000555541 TRIM43BA6NCK2 446 aa4.38□□□□□ -1.71
SNX6-204ENST00000555541 C2CD4BA6NLJ0 364 aa4.38□□□□□ -1.71
SNX6-204ENST00000555541 A8MVJ9 347 aa4.38□□□□□ -1.71
SNX6-204ENST00000555541 PHGDHO43175 533 aaKnown RBP4.38□□□□□ -1.71
SNX6-204ENST00000555541 CCP110O43303 1012 aa4.38□□□□□ -1.71
SNX6-204ENST00000555541 SLC28A2O43868 658 aa4.38□□□□□ -1.71
SNX6-204ENST00000555541 TUSC2O75896 110 aa4.38□□□□□ -1.71
SNX6-204ENST00000555541 PARP1P09874 1014 aaKnown RBP4.38□□□□□ -1.71
SNX6-204ENST00000555541 CDKN2AP42771 156 aaKnown RBP4.38□□□□□ -1.71
SNX6-204ENST00000555541 GATMP50440 423 aa4.38□□□□□ -1.71
SNX6-204ENST00000555541 EPHB1P54762 984 aa4.38□□□□□ -1.71
SNX6-204ENST00000555541 INSCQ1MX18 579 aa4.38□□□□□ -1.71
SNX6-204ENST00000555541 ANO6Q4KMQ2 910 aa4.38□□□□□ -1.71
SNX6-204ENST00000555541 NPNTQ6UXI9 565 aa4.38□□□□□ -1.71
SNX6-204ENST00000555541 OVCH2Q7RTZ1 564 aa4.38□□□□□ -1.71
SNX6-204ENST00000555541 FAM177A1Q8N128 213 aaPredicted RBP4.38□□□□□ -1.71
SNX6-204ENST00000555541 PNPLA1Q8N8W4 532 aa4.38□□□□□ -1.71
SNX6-204ENST00000555541 ZBTB34Q8NCN2 500 aa4.38□□□□□ -1.71
SNX6-204ENST00000555541 TRIM43Q96BQ3 446 aaPredicted RBP4.38□□□□□ -1.71
SNX6-204ENST00000555541 MSI2Q96DH6 328 aaKnown RBP4.38□□□□□ -1.71
SNX6-204ENST00000555541 HS6ST2Q96MM7 605 aa4.38□□□□□ -1.71
SNX6-204ENST00000555541 PPP1R9BQ96SB3 815 aa4.38□□□□□ -1.71
SNX6-204ENST00000555541 RGS17Q9UGC6 210 aaPredicted RBP4.38□□□□□ -1.71
SNX6-204ENST00000555541 MAFFQ9ULX9 164 aa4.38□□□□□ -1.71
SNX6-204ENST00000555541 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.37□□□□□ -1.71
SNX6-204ENST00000555541 IGLV5-39A0A0G2JS06 123 aa4.37□□□□□ -1.71
SNX6-204ENST00000555541 LOC102723971A0A1B0GUV8 181 aa4.37□□□□□ -1.71
SNX6-204ENST00000555541 MBD3L4A6NDZ8 208 aaPredicted RBP4.37□□□□□ -1.71
SNX6-204ENST00000555541 MBD3L3A6NE82 208 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms