RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 WDR53Q7Z5U6 358 aaPredicted RBP3.67□□□□□ -1.82
SCFD1-213ENST00000554776 AMIGO2Q86SJ2 522 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 ZNF354CQ86Y25 554 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 SUGP1Q8IWZ8 645 aaKnown RBP3.67□□□□□ -1.82
SCFD1-213ENST00000554776 CPXCR1Q8N123 301 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 SDR16C5Q8N3Y7 309 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 CCDC150Q8NCX0 1101 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 STYXQ8WUJ0 223 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 PPM1EQ8WY54 764 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 GDF15Q99988 308 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 SORBS1Q9BX66 1292 aaKnown RBP3.67□□□□□ -1.82
SCFD1-213ENST00000554776 MAGEB5Q9BZ81 275 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 FAM83DQ9H4H8 585 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 DLL3Q9NYJ7 618 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.67□□□□□ -1.82
SCFD1-213ENST00000554776 VPS51Q9UID3 782 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 WNT6Q9Y6F9 365 aa3.67□□□□□ -1.82
SCFD1-213ENST00000554776 H0YIZ8 118 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 AGPSO00116 658 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 NPC1O15118 1278 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 FGAP02671 866 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 HGFP14210 728 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 NDUFB7P17568 137 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 CTGFP29279 349 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 SPARCL1Q14515 664 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 TAF5Q15542 800 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 RAB30Q15771 203 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 CYP1B1Q16678 543 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 TIGD6Q17RP2 521 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 ZACNQ401N2 412 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 HSP90AB4PQ58FF6 505 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 AARS2Q5JTZ9 985 aaKnown RBP3.66□□□□□ -1.82
SCFD1-213ENST00000554776 TLDC1Q6P9B6 456 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 ZNF788Q6ZQV5 615 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 Q6ZWC4 215 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 KRT28Q7Z3Y7 464 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 CAND1Q86VP6 1230 aaKnown RBP3.66□□□□□ -1.82
SCFD1-213ENST00000554776 SPATA5Q8NB90 893 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 FANCBQ8NB91 859 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 RP9Q8TA86 221 aaKnown RBP3.66□□□□□ -1.82
SCFD1-213ENST00000554776 TBC1D5Q92609 795 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 VOPP1Q96AW1 172 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 TBC1D20Q96BZ9 403 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 RSPRY1Q96DX4 576 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 RMDN3Q96TC7 470 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 FSD1LQ9BXM9 530 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 PCDHAC1Q9H158 963 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 MYLK2Q9H1R3 596 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 MAGEH1Q9H213 219 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 ITM2CQ9NQX7 267 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 DUSP22Q9NRW4 184 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 RGL1Q9NZL6 768 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 ZMYND8Q9ULU4 1186 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-213ENST00000554776 DGKBQ9Y6T7 804 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 AOX1Q06278 1338 aa3.66□□□□□ -1.82
SCFD1-213ENST00000554776 ACKR2O00590 384 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 ZNF213O14771 459 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 KCNQ3O43525 872 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 RGS10O43665 173 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 SKAP2O75563 359 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-213ENST00000554776 USP1O94782 785 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 HNRNPCP07910 306 aaKnown RBP eCLIP3.65□□□□□ -1.83
SCFD1-213ENST00000554776 FAM163BP0C2L3 166 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 PECAM1P16284 738 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-213ENST00000554776 ZNF37AP17032 561 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-213ENST00000554776 EPHA3P29320 983 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 PRKAR1BP31321 381 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 ATICP31939 592 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 CYP2C18P33260 490 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 GRK6P43250 576 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 TPTEP56180 551 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 TIRAPP58753 221 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 MRPS21P82921 87 aaKnown RBP3.65□□□□□ -1.83
SCFD1-213ENST00000554776 BIRC3Q13489 604 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 POSTNQ15063 836 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 MANEALQ5VSG8 457 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 FCRLBQ6BAA4 426 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 JMJD6Q6NYC1 403 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-213ENST00000554776 CEP85Q6P2H3 762 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 DPY19L3Q6ZPD9 716 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 SMAP1Q8IYB5 467 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-213ENST00000554776 CACNA2D3Q8IZS8 1091 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 LRRC71Q8N4P6 559 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 SMCR8Q8TEV9 937 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-213ENST00000554776 XAGE5Q8WWM1 108 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 REPS1Q96D71 796 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 ZNF668Q96K58 619 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-213ENST00000554776 ZBTB45Q96K62 511 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-213ENST00000554776 SNX27Q96L92 541 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 THAP7Q9BT49 309 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-213ENST00000554776 VN1R3Q9BXE9 311 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 EPS8L2Q9H6S3 715 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 HEYLQ9NQ87 328 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-213ENST00000554776 SAGE1Q9NXZ1 904 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 DACT1Q9NYF0 836 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 SERGEFQ9UGK8 458 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 RIMKLBQ9ULI2 386 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 DRG1Q9Y295 367 aaKnown RBP3.65□□□□□ -1.83
SCFD1-213ENST00000554776 GPR52Q9Y2T5 361 aa3.65□□□□□ -1.83
SCFD1-213ENST00000554776 GOLGA6L3A6NEY3 463 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms