RNA–Protein interactions for RNA: ENST00000554174.1

LRP1-207, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-207ENST00000554174 FAF2Q96CS3 445 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 C11orf84Q9BUA3 381 aaPredicted RBP12.71□□□□□ -0.37
LRP1-207ENST00000554174 SENP1Q9P0U3 644 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 CPA4Q9UI42 421 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 SMG5Q9UPR3 1016 aaKnown RBP12.71□□□□□ -0.37
LRP1-207ENST00000554174 SMIM35A0A1B0GVV1 85 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 IQCA1LA6NCM1 817 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 KPNA7A9QM74 516 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 MDM4O15151 490 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 GSTA1P08263 222 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 TKTP29401 623 aaKnown RBP12.7□□□□□ -0.38
LRP1-207ENST00000554174 L1CAMP32004 1257 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 GNL1P36915 607 aaPredicted RBP12.7□□□□□ -0.38
LRP1-207ENST00000554174 ADAM17P78536 824 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 GBE1Q04446 702 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 MFSD10Q14728 455 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 PDK4Q16654 411 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 KBTBD12Q3ZCT8 623 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 UBXN11Q5T124 520 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 SPRYD7Q5W111 196 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 LVRNQ6Q4G3 990 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 PRPF39Q86UA1 669 aaKnown RBP12.7□□□□□ -0.38
LRP1-207ENST00000554174 TLK2Q86UE8 772 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 PNMA8AQ86V59 439 aaPredicted RBP12.7□□□□□ -0.38
LRP1-207ENST00000554174 UNC93AQ86WB7 457 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 CCDC110Q8TBZ0 833 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 PPCSQ9HAB8 311 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 MTMR10Q9NXD2 777 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 FETUBQ9UGM5 382 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 PHTF1Q9UMS5 762 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 MFHAS1Q9Y4C4 1052 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 NR2E3Q9Y5X4 410 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 CHADO15335 359 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 SETSIPP0DME0 302 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 TGM2P21980 687 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 CYP2F1P24903 491 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 ADRA1DP25100 572 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 MSH2P43246 934 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 NCALDP61601 193 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 CCL14Q16627 93 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 KLHL38Q2WGJ6 581 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 CAND1Q86VP6 1230 aaKnown RBP12.7□□□□□ -0.38
LRP1-207ENST00000554174 SUGP1Q8IWZ8 645 aaKnown RBP12.7□□□□□ -0.38
LRP1-207ENST00000554174 CCDC185Q8N715 623 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 ANKRD52Q8NB46 1076 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 SLC2A14Q8TDB8 520 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 STK32AQ8WU08 396 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 RTP4Q96DX8 246 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 PARK7Q99497 189 aaKnown RBP12.7□□□□□ -0.38
LRP1-207ENST00000554174 NRDE2Q9H7Z3 1164 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 PLAC1Q9HBJ0 212 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 SLC17A7Q9P2U7 560 aa12.7□□□□□ -0.38
LRP1-207ENST00000554174 UBQLN1Q9UMX0 589 aaKnown RBP12.7□□□□□ -0.38
LRP1-207ENST00000554174 SLC15A5A6NIM6 579 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 SMAPO00193 183 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 ZBED1O96006 694 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 C1QAP02745 245 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 RDXP35241 583 aaKnown RBP12.69□□□□□ -0.38
LRP1-207ENST00000554174 YWHAZP63104 245 aaKnown RBP12.69□□□□□ -0.38
LRP1-207ENST00000554174 KCNJ2P63252 427 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 BEX3Q00994 111 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 BST2Q10589 180 aaKnown RBP12.69□□□□□ -0.38
LRP1-207ENST00000554174 SLC26A9Q7LBE3 791 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 TBC1D1Q86TI0 1168 aaPredicted RBP12.69□□□□□ -0.38
LRP1-207ENST00000554174 FAM228AQ86W67 206 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 CRYBG2Q8N1P7 616 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 PYROXD2Q8N2H3 581 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 CENPIQ92674 756 aaPredicted RBP12.69□□□□□ -0.38
LRP1-207ENST00000554174 USP6NLQ92738 828 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 TBCBQ99426 244 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 TRIM56Q9BRZ2 755 aaKnown RBP12.69□□□□□ -0.38
LRP1-207ENST00000554174 ZNF670Q9BS34 389 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 DHX35Q9H5Z1 703 aaKnown RBP12.69□□□□□ -0.38
LRP1-207ENST00000554174 ETNK1Q9HBU6 452 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 PAK5Q9P286 719 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 CACNG4Q9UBN1 327 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 ZNF638Q14966 1978 aaKnown RBP12.69□□□□□ -0.38
LRP1-207ENST00000554174 BRCA2P51587 3418 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 BCLAF3A2AJT9 711 aaKnown RBP12.69□□□□□ -0.38
LRP1-207ENST00000554174 WDR91A4D1P6 747 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 UNCXA6NJT0 531 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 FAM155BO75949 473 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 METTL18O95568 372 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 APRTP07741 180 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 ZNF865P0CJ78 1059 aaPredicted RBP12.69□□□□□ -0.38
LRP1-207ENST00000554174 PTPN9P43378 593 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 YWHAGP61981 247 aaKnown RBP eCLIP12.69□□□□□ -0.38
LRP1-207ENST00000554174 ELF3P78545 371 aaPredicted RBP12.69□□□□□ -0.38
LRP1-207ENST00000554174 BNIP1Q12981 228 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 DPYSL2Q16555 572 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 RGS9BPQ6ZS82 235 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 APBB1IPQ7Z5R6 666 aaPredicted RBP12.69□□□□□ -0.38
LRP1-207ENST00000554174 ZDHHC17Q8IUH5 632 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 PARP9Q8IXQ6 854 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 ZNF276Q8N554 614 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 BANPQ8N9N5 519 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 TCP10LQ8TDR4 215 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 CFAP36Q96G28 342 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 SERAC1Q96JX3 654 aa12.69□□□□□ -0.38
LRP1-207ENST00000554174 ECT2Q9H8V3 914 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms