RNA–Protein interactions for RNA: ENST00000553312.1

AL079307.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL079307.1, Length 5,982 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL079307.1-201ENST00000553312 PRLRP16471 622 aa9.4□□□□□ -0.91
AL079307.1-201ENST00000553312 CDK8P49336 464 aa9.4□□□□□ -0.91
AL079307.1-201ENST00000553312 NPEPPSP55786 919 aa9.4□□□□□ -0.91
AL079307.1-201ENST00000553312 MYBPC2Q14324 1141 aa9.4□□□□□ -0.91
AL079307.1-201ENST00000553312 HIST2H2ACQ16777 129 aaPredicted RBP9.4□□□□□ -0.91
AL079307.1-201ENST00000553312 SMTNL2Q2TAL5 461 aa9.4□□□□□ -0.91
AL079307.1-201ENST00000553312 HIST2H2AA3Q6FI13 130 aa9.4□□□□□ -0.91
AL079307.1-201ENST00000553312 FASTKD5Q7L8L6 764 aaKnown RBP9.4□□□□□ -0.91
AL079307.1-201ENST00000553312 ZNF467Q7Z7K2 595 aaPredicted RBP9.4□□□□□ -0.91
AL079307.1-201ENST00000553312 C11orf96Q7Z7L8 435 aa9.4□□□□□ -0.91
AL079307.1-201ENST00000553312 TTLL6Q8N841 843 aa9.4□□□□□ -0.91
AL079307.1-201ENST00000553312 ZSWIM1Q9BR11 485 aa9.4□□□□□ -0.91
AL079307.1-201ENST00000553312 TMEM106CQ9BVX2 250 aa9.4□□□□□ -0.91
AL079307.1-201ENST00000553312 TBC1D22BQ9NU19 505 aa9.4□□□□□ -0.91
AL079307.1-201ENST00000553312 EMC3Q9P0I2 261 aa9.4□□□□□ -0.91
AL079307.1-201ENST00000553312 SLC24A2Q9UI40 661 aa9.4□□□□□ -0.91
AL079307.1-201ENST00000553312 ZNF221Q9UK13 617 aa9.4□□□□□ -0.91
AL079307.1-201ENST00000553312 TMCO1Q9UM00 188 aa9.4□□□□□ -0.91
AL079307.1-201ENST00000553312 PDS5AQ29RF7 1337 aaKnown RBP9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 CCNKO75909 580 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 CLTBP09497 229 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 CPA3P15088 417 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 PAICSP22234 425 aaKnown RBP9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 RCVRNP35243 200 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 SPIDRQ14159 915 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 SLC5A9Q2M3M2 681 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 EIF3MQ7L2H7 374 aaKnown RBP9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 ZDHHC13Q8IUH4 622 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 SIPA1Q96FS4 1042 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 SRPK1Q96SB4 655 aaKnown RBP9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 SLC9A7Q96T83 725 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 POLR3FQ9H1D9 316 aaPredicted RBP9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 TUBE1Q9UJT0 475 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 POLIQ9UNA4 740 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 USP17L15C9J2P7 530 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 USP17L13C9JLJ4 530 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 USP17L11C9JVI0 530 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 USP17L18D6R9N7 530 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 USP17L22D6RA61 530 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 USP17L17D6RBQ6 530 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 USP17L19D6RCP7 530 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 USP17L20D6RJB6 530 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 TIMM44O43615 452 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 ATP6V1G1O75348 118 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 ATP6V1C1P21283 382 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 FGFR3P22607 806 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 SKIV2L2P42285 1042 aaKnown RBP9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 LSM3P62310 102 aaKnown RBP9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 EN1Q05925 392 aaPredicted RBP9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 USP17L24Q0WX57 530 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 NFX1Q12986 1120 aaKnown RBP9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 ERICH5Q6P6B1 374 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 USP17L6PQ6QN14 398 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 HAUS6Q7Z4H7 955 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 YTHDF3Q7Z739 585 aaKnown RBP9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 POU5F2Q8N7G0 328 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 SYN2Q92777 582 aaPredicted RBP9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 DLG3Q92796 817 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 UGT2B28Q9BY64 529 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 WDR12Q9GZL7 423 aaKnown RBP9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 C2orf40Q9H1Z8 148 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 CYP4F12Q9HCS2 524 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 PCDH12Q9NPG4 1184 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 RPS6KL1Q9Y6S9 549 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 HECW2Q9P2P5 1572 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 LIN7AO14910 233 aaPredicted RBP9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 HAT1O14929 419 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 EXTL3O43909 919 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 DBTP11182 482 aaKnown RBP9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 TGFBR2P37173 567 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 NT5C2P49902 561 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 RCAN1P53805 252 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 RAB25P57735 213 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 MRPS22P82650 360 aaKnown RBP9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 RHAGQ02094 409 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 EFR3AQ14156 821 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 EZH2Q15910 746 aaKnown RBP9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 PAPD7Q5XG87 772 aaKnown RBP9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 PPP1R18Q6NYC8 613 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 NEK5Q6P3R8 708 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 IL17REQ8NFR9 667 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 FBXO25Q8TCJ0 367 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 NACC2Q96BF6 587 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 CDRT15Q96T59 188 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 YIPF2Q9BWQ6 316 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 PIH1D3Q9NQM4 214 aaKnown RBP9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 NCKIPSDQ9NZQ3 722 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 RPAP1Q9BWH6 1393 aaPredicted RBP9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 ARHGEF12Q9NZN5 1544 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 TMCC2O75069 709 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 RHOBTB3O94955 611 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 NMT1P30419 496 aaKnown RBP9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 RGS7P49802 495 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 ACLYP53396 1101 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 SCRN3Q0VDG4 424 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 DDX39BQ13838 428 aaKnown RBP9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 PROX1Q92786 737 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 GJD4Q96KN9 370 aaPredicted RBP9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 DNAJC7Q99615 494 aa9.39□□□□□ -0.91
AL079307.1-201ENST00000553312 ARMCX1Q9P291 453 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms