RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 SPATA18Q8TC71 538 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 GRK7Q8WTQ7 553 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 MARCH5Q9NX47 278 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 UPP2O95045 317 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 GAS8O95995 478 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 KLRC2P26717 231 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 VCPP55072 806 aaKnown RBP20.54■□□□□ 0.88
SSH1-209ENST00000551165 SLC39A12Q504Y0 691 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 OR2W6PQ8NHA6 318 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 PWWP2AQ96N64 755 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 SLC2A13Q96QE2 648 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 NPY6RQ99463 290 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 TXLNGYQ9BZA5 131 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 MTMR10Q9NXD2 777 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 ATP8A1Q9Y2Q0 1164 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 TBKBP1A7MCY6 615 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 MAP3K6O95382 1288 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 KRT14P02533 472 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 PTPRDP23468 1912 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 ADCY8P40145 1251 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 NRLP54845 237 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 GDF10P55107 478 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 ERMARDQ5T6L9 678 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 DRICH1Q6PGQ1 229 aaPredicted RBP20.53■□□□□ 0.88
SSH1-209ENST00000551165 PQLC3Q8N755 202 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 TEKT4Q8WW24 435 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 EDEM1Q92611 657 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 APBB2Q92870 758 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 NT5C3BQ969T7 300 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 RNF157Q96PX1 679 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 DHX35Q9H5Z1 703 aaKnown RBP20.53■□□□□ 0.88
SSH1-209ENST00000551165 ZBED1O96006 694 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 AMHP03971 560 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 L1CAMP32004 1257 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 NOS2P35228 1153 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 TSPY1Q01534 308 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 NME3Q13232 169 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 VARS2Q5ST30 1063 aaKnown RBP20.53■□□□□ 0.88
SSH1-209ENST00000551165 FAM171A1Q5VUB5 890 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 ALLCQ8N6M5 410 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 PCDH19Q8TAB3 1148 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 LRRN4Q8WUT4 740 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 NKD2Q969F2 451 aaPredicted RBP20.53■□□□□ 0.88
SSH1-209ENST00000551165 POPDC2Q9HBU9 364 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 CNGB3Q9NQW8 809 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 ADAM28Q9UKQ2 775 aa20.53■□□□□ 0.88
SSH1-209ENST00000551165 M0QYT0 321 aa20.52■□□□□ 0.88
SSH1-209ENST00000551165 MDM4O15151 490 aa20.52■□□□□ 0.88
SSH1-209ENST00000551165 OAZ2O95190 189 aa20.52■□□□□ 0.88
SSH1-209ENST00000551165 PGFP49763 221 aa20.52■□□□□ 0.88
SSH1-209ENST00000551165 CFAP58Q5T655 872 aa20.52■□□□□ 0.88
SSH1-209ENST00000551165 C1orf228Q6PIY5 440 aa20.52■□□□□ 0.88
SSH1-209ENST00000551165 ZNF365Q70YC5 407 aa20.52■□□□□ 0.88
SSH1-209ENST00000551165 TMCO2Q7Z6W1 182 aaPredicted RBP20.52■□□□□ 0.88
SSH1-209ENST00000551165 NPAS4Q8IUM7 802 aa20.52■□□□□ 0.88
SSH1-209ENST00000551165 BCL7CQ8WUZ0 217 aaPredicted RBP20.52■□□□□ 0.88
SSH1-209ENST00000551165 LRRC4CQ9HCJ2 640 aa20.52■□□□□ 0.88
SSH1-209ENST00000551165 DMAP1Q9NPF5 467 aaPredicted RBP20.52■□□□□ 0.88
SSH1-209ENST00000551165 PIGVQ9NUD9 493 aa20.52■□□□□ 0.88
SSH1-209ENST00000551165 FEZ2Q9UHY8 353 aaPredicted RBP20.52■□□□□ 0.88
SSH1-209ENST00000551165 TBX21Q9UL17 535 aa20.52■□□□□ 0.88
SSH1-209ENST00000551165 AP4E1Q9UPM8 1137 aa20.52■□□□□ 0.88
SSH1-209ENST00000551165 PAX3P23760 479 aa20.52■□□□□ 0.88
SSH1-209ENST00000551165 ITGA8P53708 1063 aa20.52■□□□□ 0.88
SSH1-209ENST00000551165 IFRD2Q12894 506 aaPredicted RBP20.52■□□□□ 0.88
SSH1-209ENST00000551165 ANKRD20A8PQ5CZ79 823 aa20.52■□□□□ 0.88
SSH1-209ENST00000551165 SDHAF4Q5VUM1 108 aa20.52■□□□□ 0.88
SSH1-209ENST00000551165 STRADAQ7RTN6 431 aa20.52■□□□□ 0.88
SSH1-209ENST00000551165 BNIPLQ7Z465 357 aa20.52■□□□□ 0.88
SSH1-209ENST00000551165 SPATA2LQ8IUW3 424 aaPredicted RBP20.52■□□□□ 0.88
SSH1-209ENST00000551165 UBLCP1Q8WVY7 318 aaPredicted RBP20.52■□□□□ 0.88
SSH1-209ENST00000551165 TOX2Q96NM4 488 aa20.52■□□□□ 0.88
SSH1-209ENST00000551165 PGLYRP2Q96PD5 576 aa20.52■□□□□ 0.88
SSH1-209ENST00000551165 KCTD15Q96SI1 283 aaPredicted RBP20.52■□□□□ 0.88
SSH1-209ENST00000551165 ANLNQ9NQW6 1124 aa20.52■□□□□ 0.88
SSH1-209ENST00000551165 FAN1Q9Y2M0 1017 aa20.52■□□□□ 0.88
SSH1-209ENST00000551165 PPFIA2O75334 1257 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 ATF2P15336 505 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 ITGB8P26012 769 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 CHKAP35790 457 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 SYDE1Q6ZW31 735 aaPredicted RBP20.51■□□□□ 0.87
SSH1-209ENST00000551165 TAS1R1Q7RTX1 841 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 PLD5Q8N7P1 536 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 SLC7A14Q8TBB6 771 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 SNF8Q96H20 258 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 MAK16Q9BXY0 300 aaKnown RBP20.51■□□□□ 0.87
SSH1-209ENST00000551165 ZCWPW1Q9H0M4 648 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 EPB41L4BQ9H329 900 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 ACBD3Q9H3P7 528 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 AAASQ9NRG9 546 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 DNAJC17Q9NVM6 304 aaKnown RBP20.51■□□□□ 0.87
SSH1-209ENST00000551165 ABI2Q9NYB9 513 aaPredicted RBP20.51■□□□□ 0.87
SSH1-209ENST00000551165 PLAAQ9Y263 795 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 DRG1Q9Y295 367 aaKnown RBP20.51■□□□□ 0.87
SSH1-209ENST00000551165 I6L893 689 aaPredicted RBP20.51■□□□□ 0.87
SSH1-209ENST00000551165 APOC4-APOC2K7ER74 178 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 FBXO21O94952 628 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 APOC2P02655 101 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 ALDH2P05091 517 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 NCAM1P13591 858 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms