RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 CCNJLQ8IV13 435 aa15.18■□□□□ 0.02
LETMD1-209ENST00000547318 VPS52Q8N1B4 723 aa15.18■□□□□ 0.02
LETMD1-209ENST00000547318 EMID1Q96A84 441 aaPredicted RBP15.18■□□□□ 0.02
LETMD1-209ENST00000547318 PTCD3Q96EY7 689 aaKnown RBP15.18■□□□□ 0.02
LETMD1-209ENST00000547318 TSPAN18Q96SJ8 248 aa15.18■□□□□ 0.02
LETMD1-209ENST00000547318 MINDY3Q9H8M7 445 aa15.18■□□□□ 0.02
LETMD1-209ENST00000547318 POPDC2Q9HBU9 364 aa15.18■□□□□ 0.02
LETMD1-209ENST00000547318 PCDH18Q9HCL0 1135 aa15.18■□□□□ 0.02
LETMD1-209ENST00000547318 DONSONQ9NYP3 566 aa15.18■□□□□ 0.02
LETMD1-209ENST00000547318 HACD1B0YJ81 288 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 E5RJQ4 531 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 APOEP02649 317 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 C1QAP02745 245 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 DLDP09622 509 aaKnown RBP15.17■□□□□ 0.02
LETMD1-209ENST00000547318 TPBGLP0DKB5 382 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 MLNP12872 115 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 PCBP1Q15365 356 aaKnown RBP eCLIP15.17■□□□□ 0.02
LETMD1-209ENST00000547318 TAF5Q15542 800 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 CCDC14Q49A88 953 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 PKDCCQ504Y2 493 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 ZNF449Q6P9G9 518 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 OLFML1Q6UWY5 402 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 TIFABQ6ZNK6 161 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 ZNF410Q86VK4 478 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 ZC3H18Q86VM9 953 aaKnown RBP15.17■□□□□ 0.02
LETMD1-209ENST00000547318 LRRC52Q8N7C0 313 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 GSDMBQ8TAX9 411 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 ACMSDQ8TDX5 336 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 SERAC1Q96JX3 654 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 RCOR3Q9P2K3 495 aaPredicted RBP15.17■□□□□ 0.02
LETMD1-209ENST00000547318 STOML1Q9UBI4 398 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 HEY2Q9UBP5 337 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 HESX1Q9UBX0 185 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 HMGXB4Q9UGU5 601 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 FZD1Q9UP38 647 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 SORCS3Q9UPU3 1222 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 KCNH4Q9UQ05 1017 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 PLLPQ9Y342 182 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 DICER1Q9UPY3 1922 aaKnown RBP15.17■□□□□ 0.02
LETMD1-209ENST00000547318 PPP1R12AO14974 1030 aaPredicted RBP15.17■□□□□ 0.02
LETMD1-209ENST00000547318 CBX6O95503 412 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 RPSAP08865 295 aaKnown RBP15.17■□□□□ 0.02
LETMD1-209ENST00000547318 PYGBP11216 843 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 CDC42EP1Q00587 391 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 ZBTB16Q05516 673 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 DPYSL2Q16555 572 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 TSNAXIP1Q2TAA8 658 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 ARHGAP17Q68EM7 881 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 EEPD1Q7L9B9 569 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 PSTKQ8IV42 348 aaKnown RBP15.17■□□□□ 0.02
LETMD1-209ENST00000547318 TMEM192Q8IY95 271 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 THOC1Q96FV9 657 aaKnown RBP15.17■□□□□ 0.02
LETMD1-209ENST00000547318 FAM111AQ96PZ2 611 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 NUDCD1Q96RS6 583 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 SRPK1Q96SB4 655 aaKnown RBP15.17■□□□□ 0.02
LETMD1-209ENST00000547318 TMEM120AQ9BXJ8 343 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 WWP1Q9H0M0 922 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 FAM96AQ9H5X1 160 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 STN1Q9H668 368 aaKnown RBP15.17■□□□□ 0.02
LETMD1-209ENST00000547318 KANSL3Q9P2N6 904 aa15.17■□□□□ 0.02
LETMD1-209ENST00000547318 A8MXQ7 604 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 IL4RP24394 825 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 FDFT1P37268 417 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 MMRN1Q13201 1228 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 NAA25Q14CX7 972 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 GOLGA7BQ2TAP0 167 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 PLEKHG4Q58EX7 1191 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 FASTKD5Q7L8L6 764 aaKnown RBP15.16■□□□□ 0.02
LETMD1-209ENST00000547318 IGDCC3Q8IVU1 814 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 PQLC3Q8N755 202 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 RFWD2Q8NHY2 731 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 FAM172AQ8WUF8 416 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 ZNF570Q96NI8 536 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 FERMT1Q9BQL6 677 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 C10orf88Q9H8K7 445 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 A0A0G2JND7 137 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 SPDYE5A6NIY4 337 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 FAM159BA6NKW6 160 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 TRIM49D1C9J1S8 452 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 HGSO14964 777 aaPredicted RBP15.16■□□□□ 0.02
LETMD1-209ENST00000547318 PFKMP08237 780 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 INSRRP14616 1297 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 ARF4P18085 180 aaPredicted RBP15.16■□□□□ 0.02
LETMD1-209ENST00000547318 EPHB2P29323 1055 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 CRHR1P34998 444 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 ACADSBP45954 432 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 TAF11Q15544 211 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 C1orf228Q6PIY5 440 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 NPNTQ6UXI9 565 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 C4orf50Q6ZRC1 276 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 CAND1Q86VP6 1230 aaKnown RBP15.16■□□□□ 0.02
LETMD1-209ENST00000547318 UBA3Q8TBC4 463 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 TRAPPC12Q8WVT3 735 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 CENPIQ92674 756 aaPredicted RBP15.16■□□□□ 0.02
LETMD1-209ENST00000547318 TTC17Q96AE7 1141 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 OXNAD1Q96HP4 312 aaPredicted RBP15.16■□□□□ 0.02
LETMD1-209ENST00000547318 NAF1Q96HR8 494 aaKnown RBP15.16■□□□□ 0.02
LETMD1-209ENST00000547318 EBNA1BP2Q99848 306 aaKnown RBP15.16■□□□□ 0.02
LETMD1-209ENST00000547318 NAT9Q9BTE0 207 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 SNRNP25Q9BV90 132 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms