RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 SMAD7O15105 426 aaKnown RBP8.92□□□□□ -0.98
VPS29-203ENST00000546588 EFEMP2O95967 443 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 CYP1A2P05177 515 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 PFKMP08237 780 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 MMEP08473 750 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 CLTBP09497 229 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 H2AFZP0C0S5 128 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 MYBL1P10243 752 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 TNNT1P13805 278 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 PRLRP16471 622 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 WARSP23381 471 aaKnown RBP8.92□□□□□ -0.98
VPS29-203ENST00000546588 RPL34P49207 117 aaKnown RBP8.92□□□□□ -0.98
VPS29-203ENST00000546588 LILRA4P59901 499 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 PTP4A2Q12974 167 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 TUBB2AQ13885 445 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 RAB33AQ14088 237 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 SOWAHAQ2M3V2 549 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 TRIM60Q495X7 471 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 CLLU1OSQ5K130 101 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 CCDC122Q5T0U0 273 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 RASIP1Q5U651 963 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 ARHGAP17Q68EM7 881 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 ACAD10Q6JQN1 1059 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 CD300LGQ6UXG3 332 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 H2AFVQ71UI9 128 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 MON1BQ7L1V2 547 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 SLITRK4Q8IW52 837 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 RHOT2Q8IXI1 618 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 RPUSD2Q8IZ73 545 aaKnown RBP8.92□□□□□ -0.98
VPS29-203ENST00000546588 CRYBG2Q8N1P7 616 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 TMEM86AQ8N2M4 240 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 LRRC57Q8N9N7 239 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 DIS3LQ8TF46 1054 aaKnown RBP8.92□□□□□ -0.98
VPS29-203ENST00000546588 ZNF606Q8WXB4 792 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 SEPT8Q92599 483 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 PLD4Q96BZ4 506 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 TMEM176AQ96HP8 235 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 TUBB2BQ9BVA1 445 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 HIPK3Q9H422 1215 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 SMYD3Q9H7B4 428 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 MIOSQ9NXC5 875 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 STARD13Q9Y3M8 1113 aa8.92□□□□□ -0.98
VPS29-203ENST00000546588 OBSL1O75147 1896 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 PLXNA4Q9HCM2 1894 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.91□□□□□ -0.98
VPS29-203ENST00000546588 O00370 1275 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 CES2O00748 559 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 ENPP3O14638 875 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 KLF4O43474 513 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 KIF5CO60282 957 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 BPNT1O95861 308 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 KRT19P08727 400 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 VDRP11473 427 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 TNFAIP3P21580 790 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 MMP8P22894 467 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 GABRB2P47870 512 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 GUCY2FP51841 1108 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 GALCP54803 685 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 TNNC1P63316 161 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 TLE2Q04725 743 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 GLRA4Q5JXX5 417 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 PAPD7Q5XG87 772 aaKnown RBP8.91□□□□□ -0.98
VPS29-203ENST00000546588 EGFLAMQ63HQ2 1017 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 CNKSR3Q6P9H4 555 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 GK5Q6ZS86 529 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 KIAA1328Q86T90 577 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 SULF2Q8IWU5 870 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 KIF18AQ8NI77 898 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 GATAD2BQ8WXI9 593 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 TWNKQ96RR1 684 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 WDR24Q96S15 920 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 RPS6KC1Q96S38 1066 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 GAD1Q99259 594 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 PACSIN1Q9BY11 444 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 ELOVL4Q9GZR5 314 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 ACP6Q9NPH0 428 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 LZTFL1Q9NQ48 299 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 TAS2R14Q9NYV8 317 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 UVRAGQ9P2Y5 699 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 LCMT1Q9UIC8 334 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 NME7Q9Y5B8 376 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 PCDHB4Q9Y5E5 795 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 CAPN6Q9Y6Q1 641 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 ATG2AQ2TAZ0 1938 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 DENND4CQ5VZ89 1909 aa8.91□□□□□ -0.98
VPS29-203ENST00000546588 PODXLO00592 558 aa8.9□□□□□ -0.98
VPS29-203ENST00000546588 MED7O43513 233 aa8.9□□□□□ -0.98
VPS29-203ENST00000546588 DYRK3O43781 588 aa8.9□□□□□ -0.98
VPS29-203ENST00000546588 EFCAB14O75071 495 aa8.9□□□□□ -0.98
VPS29-203ENST00000546588 TFRCP02786 760 aaKnown RBP8.9□□□□□ -0.98
VPS29-203ENST00000546588 SETSIPP0DME0 302 aa8.9□□□□□ -0.98
VPS29-203ENST00000546588 KRT5P13647 590 aa8.9□□□□□ -0.98
VPS29-203ENST00000546588 TYMPP19971 482 aa8.9□□□□□ -0.98
VPS29-203ENST00000546588 NME2P22392 152 aa8.9□□□□□ -0.98
VPS29-203ENST00000546588 ALAS2P22557 587 aa8.9□□□□□ -0.98
VPS29-203ENST00000546588 SCNN1GP51170 649 aa8.9□□□□□ -0.98
VPS29-203ENST00000546588 AFF1P51825 1210 aaKnown RBP8.9□□□□□ -0.98
VPS29-203ENST00000546588 CNGA2Q16280 664 aa8.9□□□□□ -0.98
VPS29-203ENST00000546588 IFI16Q16666 785 aaKnown RBP8.9□□□□□ -0.98
VPS29-203ENST00000546588 LRRC26Q2I0M4 334 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms