RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 GFPT1Q06210 699 aaPredicted RBP17.66■□□□□ 0.42
CPSF7-225ENST00000545934 BMT2Q1RMZ1 405 aa17.66■□□□□ 0.42
CPSF7-225ENST00000545934 FAM26FQ5R3K3 315 aa17.66■□□□□ 0.42
CPSF7-225ENST00000545934 RAB44Q7Z6P3 723 aaPredicted RBP17.66■□□□□ 0.42
CPSF7-225ENST00000545934 HDDC3Q8N4P3 179 aa17.66■□□□□ 0.42
CPSF7-225ENST00000545934 MINDY1Q8N5J2 469 aa17.66■□□□□ 0.42
CPSF7-225ENST00000545934 DEFB119Q8N690 84 aa17.66■□□□□ 0.42
CPSF7-225ENST00000545934 SMARCD1Q96GM5 515 aa17.66■□□□□ 0.42
CPSF7-225ENST00000545934 ACOX2Q99424 681 aa17.66■□□□□ 0.42
CPSF7-225ENST00000545934 GABRG3Q99928 467 aa17.66■□□□□ 0.42
CPSF7-225ENST00000545934 C7orf25Q9BPX7 421 aa17.66■□□□□ 0.42
CPSF7-225ENST00000545934 GTPBP2Q9BX10 602 aaKnown RBP17.66■□□□□ 0.42
CPSF7-225ENST00000545934 SDCBP2Q9H190 292 aa17.66■□□□□ 0.42
CPSF7-225ENST00000545934 SMYD3Q9H7B4 428 aa17.66■□□□□ 0.42
CPSF7-225ENST00000545934 CSNK1G1Q9HCP0 422 aa17.66■□□□□ 0.42
CPSF7-225ENST00000545934 MTMR6Q9Y217 621 aa17.66■□□□□ 0.42
CPSF7-225ENST00000545934 FREM2Q5SZK8 3169 aa17.66■□□□□ 0.42
CPSF7-225ENST00000545934 TP53BP1Q12888 1972 aaPredicted RBP17.66■□□□□ 0.42
CPSF7-225ENST00000545934 DSPP15924 2871 aaKnown RBP17.65■□□□□ 0.42
CPSF7-225ENST00000545934 ZFYVE26Q68DK2 2539 aa17.65■□□□□ 0.42
CPSF7-225ENST00000545934 TMEM131Q92545 1883 aa17.65■□□□□ 0.42
CPSF7-225ENST00000545934 A0A1W2PQD8 194 aa17.65■□□□□ 0.42
CPSF7-225ENST00000545934 OPHN1O60890 802 aa17.65■□□□□ 0.42
CPSF7-225ENST00000545934 ZNF217O75362 1048 aa17.65■□□□□ 0.42
CPSF7-225ENST00000545934 RING1Q06587 406 aa17.65■□□□□ 0.42
CPSF7-225ENST00000545934 TRPC3Q13507 836 aa17.65■□□□□ 0.42
CPSF7-225ENST00000545934 ANO4Q32M45 955 aa17.65■□□□□ 0.42
CPSF7-225ENST00000545934 GRAMD4Q6IC98 578 aa17.65■□□□□ 0.42
CPSF7-225ENST00000545934 LRSAM1Q6UWE0 723 aa17.65■□□□□ 0.42
CPSF7-225ENST00000545934 NUDT18Q6ZVK8 323 aa17.65■□□□□ 0.42
CPSF7-225ENST00000545934 LINC00301Q8NCQ3 95 aa17.65■□□□□ 0.42
CPSF7-225ENST00000545934 IPO4Q8TEX9 1081 aaKnown RBP17.65■□□□□ 0.42
CPSF7-225ENST00000545934 ZNF419Q96HQ0 510 aaPredicted RBP17.65■□□□□ 0.42
CPSF7-225ENST00000545934 SMOQ99835 787 aa17.65■□□□□ 0.42
CPSF7-225ENST00000545934 KLF16Q9BXK1 252 aaPredicted RBP17.65■□□□□ 0.42
CPSF7-225ENST00000545934 PRRT4C9JH25 899 aa17.64■□□□□ 0.41
CPSF7-225ENST00000545934 TAF4O00268 1085 aa17.64■□□□□ 0.41
CPSF7-225ENST00000545934 TLR5O60602 858 aa17.64■□□□□ 0.41
CPSF7-225ENST00000545934 BEST1O76090 585 aa17.64■□□□□ 0.41
CPSF7-225ENST00000545934 WASP42768 502 aa17.64■□□□□ 0.41
CPSF7-225ENST00000545934 ATXN3P54252 364 aaPredicted RBP17.64■□□□□ 0.41
CPSF7-225ENST00000545934 ASIC1P78348 528 aa17.64■□□□□ 0.41
CPSF7-225ENST00000545934 HNRNPDQ14103 355 aaKnown RBP17.64■□□□□ 0.41
CPSF7-225ENST00000545934 OR2I1PQ8NGU4 316 aa17.64■□□□□ 0.41
CPSF7-225ENST00000545934 TNIP3Q96KP6 325 aa17.64■□□□□ 0.41
CPSF7-225ENST00000545934 ZSCAN16Q9H4T2 348 aaPredicted RBP17.64■□□□□ 0.41
CPSF7-225ENST00000545934 UPF2Q9HAU5 1272 aaKnown RBP17.64■□□□□ 0.41
CPSF7-225ENST00000545934 DNAJC17Q9NVM6 304 aaKnown RBP17.64■□□□□ 0.41
CPSF7-225ENST00000545934 CGNQ9P2M7 1197 aaKnown RBP17.64■□□□□ 0.41
CPSF7-225ENST00000545934 ATRXP46100 2492 aa17.64■□□□□ 0.41
CPSF7-225ENST00000545934 AP1G2O75843 785 aa17.63■□□□□ 0.41
CPSF7-225ENST00000545934 VNN1O95497 513 aa17.63■□□□□ 0.41
CPSF7-225ENST00000545934 C4BPAP04003 597 aaKnown RBP17.63■□□□□ 0.41
CPSF7-225ENST00000545934 CISD3P0C7P0 127 aa17.63■□□□□ 0.41
CPSF7-225ENST00000545934 IRF1P10914 325 aa17.63■□□□□ 0.41
CPSF7-225ENST00000545934 CASP4P49662 377 aa17.63■□□□□ 0.41
CPSF7-225ENST00000545934 AMPD3Q01432 767 aa17.63■□□□□ 0.41
CPSF7-225ENST00000545934 SLC14A1Q13336 389 aa17.63■□□□□ 0.41
CPSF7-225ENST00000545934 ZNF423Q2M1K9 1284 aa17.63■□□□□ 0.41
CPSF7-225ENST00000545934 ZNF699Q32M78 642 aa17.63■□□□□ 0.41
CPSF7-225ENST00000545934 UNC13DQ70J99 1090 aa17.63■□□□□ 0.41
CPSF7-225ENST00000545934 NELFCDQ8IXH7 590 aa17.63■□□□□ 0.41
CPSF7-225ENST00000545934 CHCHD4Q8N4Q1 142 aa17.63■□□□□ 0.41
CPSF7-225ENST00000545934 TRIML1Q8N9V2 468 aa17.63■□□□□ 0.41
CPSF7-225ENST00000545934 HSPA12BQ96MM6 686 aa17.63■□□□□ 0.41
CPSF7-225ENST00000545934 MED10Q9BTT4 135 aa17.63■□□□□ 0.41
CPSF7-225ENST00000545934 CD93Q9NPY3 652 aa17.63■□□□□ 0.41
CPSF7-225ENST00000545934 CYLDQ9NQC7 956 aa17.63■□□□□ 0.41
CPSF7-225ENST00000545934 KRT82Q9NSB4 513 aa17.63■□□□□ 0.41
CPSF7-225ENST00000545934 CYP8B1Q9UNU6 501 aa17.63■□□□□ 0.41
CPSF7-225ENST00000545934 LHX6Q9UPM6 363 aa17.63■□□□□ 0.41
CPSF7-225ENST00000545934 ITPR1Q14643 2758 aa17.63■□□□□ 0.41
CPSF7-225ENST00000545934 MUC22E2RYF6 1773 aaPredicted RBP17.62■□□□□ 0.41
CPSF7-225ENST00000545934 LRRIQ3A6PVS8 624 aaPredicted RBP17.62■□□□□ 0.41
CPSF7-225ENST00000545934 GFRA2O00451 464 aa17.62■□□□□ 0.41
CPSF7-225ENST00000545934 PPP6R2O75170 966 aa17.62■□□□□ 0.41
CPSF7-225ENST00000545934 TBX18O95935 607 aa17.62■□□□□ 0.41
CPSF7-225ENST00000545934 SYPP08247 313 aa17.62■□□□□ 0.41
CPSF7-225ENST00000545934 TYRP14679 529 aa17.62■□□□□ 0.41
CPSF7-225ENST00000545934 AP3M2P53677 418 aa17.62■□□□□ 0.41
CPSF7-225ENST00000545934 ZNF667Q5HYK9 610 aa17.62■□□□□ 0.41
CPSF7-225ENST00000545934 TOGARAM2Q6ZUX3 1019 aa17.62■□□□□ 0.41
CPSF7-225ENST00000545934 ACOT1Q86TX2 421 aa17.62■□□□□ 0.41
CPSF7-225ENST00000545934 PROSER1Q86XN7 944 aa17.62■□□□□ 0.41
CPSF7-225ENST00000545934 CHPFQ8IZ52 775 aa17.62■□□□□ 0.41
CPSF7-225ENST00000545934 CRYBG2Q8N1P7 616 aa17.62■□□□□ 0.41
CPSF7-225ENST00000545934 PARD3BQ8TEW8 1205 aa17.62■□□□□ 0.41
CPSF7-225ENST00000545934 TMEM174Q8WUU8 243 aa17.62■□□□□ 0.41
CPSF7-225ENST00000545934 DHX58Q96C10 678 aa17.62■□□□□ 0.41
CPSF7-225ENST00000545934 P2RY11Q96G91 374 aa17.62■□□□□ 0.41
CPSF7-225ENST00000545934 MRGPRX1Q96LB2 322 aa17.62■□□□□ 0.41
CPSF7-225ENST00000545934 XPO6Q96QU8 1125 aaKnown RBP17.62■□□□□ 0.41
CPSF7-225ENST00000545934 BBS2Q9BXC9 721 aa17.62■□□□□ 0.41
CPSF7-225ENST00000545934 FBXO44Q9H4M3 255 aa17.62■□□□□ 0.41
CPSF7-225ENST00000545934 OSER1Q9NX31 292 aa17.62■□□□□ 0.41
CPSF7-225ENST00000545934 WDR35Q9P2L0 1181 aa17.62■□□□□ 0.41
CPSF7-225ENST00000545934 FBXO10Q9UK96 956 aa17.62■□□□□ 0.41
CPSF7-225ENST00000545934 NEDD8-MDP1E9PL57 170 aa17.61■□□□□ 0.41
CPSF7-225ENST00000545934 PHACTR2O75167 634 aa17.61■□□□□ 0.41
CPSF7-225ENST00000545934 CCDC130P13994 396 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 192.6 ms