RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 MMP17Q9ULZ9 603 aa20.95■□□□□ 0.94
CHD4-213ENST00000545584 MYOFQ9NZM1 2061 aa20.94■□□□□ 0.94
CHD4-213ENST00000545584 A0A1W2PQH9 124 aa20.94■□□□□ 0.94
CHD4-213ENST00000545584 TRIM49BA6NDI0 452 aa20.94■□□□□ 0.94
CHD4-213ENST00000545584 HOXC11O43248 304 aaPredicted RBP20.94■□□□□ 0.94
CHD4-213ENST00000545584 TNFRSF4P43489 277 aa20.94■□□□□ 0.94
CHD4-213ENST00000545584 PLA2G4AP47712 749 aa20.94■□□□□ 0.94
CHD4-213ENST00000545584 ATXN1P54253 815 aaKnown RBP20.94■□□□□ 0.94
CHD4-213ENST00000545584 PMS1P54277 932 aaKnown RBP20.94■□□□□ 0.94
CHD4-213ENST00000545584 ELF2Q15723 593 aa20.94■□□□□ 0.94
CHD4-213ENST00000545584 CBWD6Q4V339 395 aa20.94■□□□□ 0.94
CHD4-213ENST00000545584 CBWD3Q5JTY5 395 aa20.94■□□□□ 0.94
CHD4-213ENST00000545584 CBWD5Q5RIA9 395 aa20.94■□□□□ 0.94
CHD4-213ENST00000545584 C10orf120Q5SQS8 335 aa20.94■□□□□ 0.94
CHD4-213ENST00000545584 HTR3DQ70Z44 454 aa20.94■□□□□ 0.94
CHD4-213ENST00000545584 SLC4A11Q8NBS3 891 aa20.94■□□□□ 0.94
CHD4-213ENST00000545584 NETO1Q8TDF5 533 aa20.94■□□□□ 0.94
CHD4-213ENST00000545584 TATDN2Q93075 761 aa20.94■□□□□ 0.94
CHD4-213ENST00000545584 DHTKD1Q96HY7 919 aaPredicted RBP20.94■□□□□ 0.94
CHD4-213ENST00000545584 ZC3H10Q96K80 434 aaKnown RBP20.94■□□□□ 0.94
CHD4-213ENST00000545584 CDK5RAP1Q96SZ6 601 aaKnown RBP20.94■□□□□ 0.94
CHD4-213ENST00000545584 RTKNQ9BST9 563 aa20.94■□□□□ 0.94
CHD4-213ENST00000545584 ARRDC1-AS1Q9H2J1 176 aa20.94■□□□□ 0.94
CHD4-213ENST00000545584 NMUR1Q9HB89 426 aa20.94■□□□□ 0.94
CHD4-213ENST00000545584 DEC1Q9P2X7 70 aa20.94■□□□□ 0.94
CHD4-213ENST00000545584 COQ4Q9Y3A0 265 aa20.94■□□□□ 0.94
CHD4-213ENST00000545584 SPAG17Q6Q759 2223 aa20.94■□□□□ 0.94
CHD4-213ENST00000545584 KIAA1549LQ6ZVL6 1849 aa20.94■□□□□ 0.94
CHD4-213ENST00000545584 A0A0A0MRY4 1105 aa20.93■□□□□ 0.94
CHD4-213ENST00000545584 TBC1D3BA6NDS4 549 aa20.93■□□□□ 0.94
CHD4-213ENST00000545584 ALDH1A2O94788 518 aa20.93■□□□□ 0.94
CHD4-213ENST00000545584 RHOBTB1O94844 696 aa20.93■□□□□ 0.94
CHD4-213ENST00000545584 EPN2O95208 641 aa20.93■□□□□ 0.94
CHD4-213ENST00000545584 TIE1P35590 1138 aa20.93■□□□□ 0.94
CHD4-213ENST00000545584 RAD23BP54727 409 aa20.93■□□□□ 0.94
CHD4-213ENST00000545584 CRY1Q16526 586 aa20.93■□□□□ 0.94
CHD4-213ENST00000545584 USP39Q53GS9 565 aaKnown RBP20.93■□□□□ 0.94
CHD4-213ENST00000545584 EOGTQ5NDL2 527 aa20.93■□□□□ 0.94
CHD4-213ENST00000545584 ARHGAP17Q68EM7 881 aa20.93■□□□□ 0.94
CHD4-213ENST00000545584 ANO7Q6IWH7 933 aa20.93■□□□□ 0.94
CHD4-213ENST00000545584 CCDC186Q7Z3E2 898 aa20.93■□□□□ 0.94
CHD4-213ENST00000545584 C11orf74Q86VG3 221 aa20.93■□□□□ 0.94
CHD4-213ENST00000545584 TTC30AQ86WT1 665 aa20.93■□□□□ 0.94
CHD4-213ENST00000545584 TMEM25Q86YD3 366 aa20.93■□□□□ 0.94
CHD4-213ENST00000545584 NAT16Q8N8M0 369 aa20.93■□□□□ 0.94
CHD4-213ENST00000545584 WBP2Q969T9 261 aa20.93■□□□□ 0.94
CHD4-213ENST00000545584 ARID3AQ99856 593 aa20.93■□□□□ 0.94
CHD4-213ENST00000545584 UBXN6Q9BZV1 441 aa20.93■□□□□ 0.94
CHD4-213ENST00000545584 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.93■□□□□ 0.947e-8■□□□□ 9.1
CHD4-213ENST00000545584 OSER1Q9NX31 292 aa20.93■□□□□ 0.94
CHD4-213ENST00000545584 PCDHGA5Q9Y5G8 931 aa20.93■□□□□ 0.94
CHD4-213ENST00000545584 SDK1Q7Z5N4 2213 aa20.93■□□□□ 0.94
CHD4-213ENST00000545584 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.92■□□□□ 0.94
CHD4-213ENST00000545584 TULP3O75386 442 aa20.92■□□□□ 0.94
CHD4-213ENST00000545584 KLF8O95600 359 aaPredicted RBP20.92■□□□□ 0.94
CHD4-213ENST00000545584 CUL2Q13617 745 aa20.92■□□□□ 0.94
CHD4-213ENST00000545584 PLK5Q496M5 336 aa20.92■□□□□ 0.94
CHD4-213ENST00000545584 ISM2Q6H9L7 571 aa20.92■□□□□ 0.94
CHD4-213ENST00000545584 ETFBKMTQ8IXQ9 262 aa20.92■□□□□ 0.94
CHD4-213ENST00000545584 ARHGAP18Q8N392 663 aa20.92■□□□□ 0.94
CHD4-213ENST00000545584 ZNF276Q8N554 614 aa20.92■□□□□ 0.94
CHD4-213ENST00000545584 ALLCQ8N6M5 410 aa20.92■□□□□ 0.94
CHD4-213ENST00000545584 C12orf50Q8NA57 414 aaPredicted RBP20.92■□□□□ 0.94
CHD4-213ENST00000545584 TXNDC5Q8NBS9 432 aaKnown RBP20.92■□□□□ 0.94
CHD4-213ENST00000545584 CNOT6LQ96LI5 555 aaKnown RBP20.92■□□□□ 0.94
CHD4-213ENST00000545584 CEP63Q96MT8 703 aa20.92■□□□□ 0.94
CHD4-213ENST00000545584 XPO6Q96QU8 1125 aaKnown RBP20.92■□□□□ 0.94
CHD4-213ENST00000545584 POLMQ9NP87 494 aaPredicted RBP20.92■□□□□ 0.94
CHD4-213ENST00000545584 CLIC5Q9NZA1 410 aa20.92■□□□□ 0.94
CHD4-213ENST00000545584 WDR35Q9P2L0 1181 aa20.92■□□□□ 0.94
CHD4-213ENST00000545584 NUDT5Q9UKK9 219 aa20.92■□□□□ 0.94
CHD4-213ENST00000545584 MAN1B1Q9UKM7 699 aa20.92■□□□□ 0.94
CHD4-213ENST00000545584 USP3Q9Y6I4 520 aa20.92■□□□□ 0.94
CHD4-213ENST00000545584 DMXL1Q9Y485 3027 aa20.92■□□□□ 0.94
CHD4-213ENST00000545584 TBXAS1P24557 533 aaPredicted RBP20.91■□□□□ 0.94
CHD4-213ENST00000545584 GBP1P32455 592 aa20.91■□□□□ 0.94
CHD4-213ENST00000545584 MESP2Q0VG99 397 aa20.91■□□□□ 0.94
CHD4-213ENST00000545584 CCDC40Q4G0X9 1142 aa20.91■□□□□ 0.94
CHD4-213ENST00000545584 TRMT11Q7Z4G4 463 aaKnown RBP20.91■□□□□ 0.94
CHD4-213ENST00000545584 PIGZQ86VD9 579 aa20.91■□□□□ 0.94
CHD4-213ENST00000545584 SFTPA1Q8IWL2 248 aa20.91■□□□□ 0.94
CHD4-213ENST00000545584 IL17RCQ8NAC3 791 aa20.91■□□□□ 0.94
CHD4-213ENST00000545584 ANKRD52Q8NB46 1076 aa20.91■□□□□ 0.94
CHD4-213ENST00000545584 KCNV2Q8TDN2 545 aa20.91■□□□□ 0.94
CHD4-213ENST00000545584 SLC35C1Q96A29 364 aa20.91■□□□□ 0.94
CHD4-213ENST00000545584 BBS2Q9BXC9 721 aa20.91■□□□□ 0.94
CHD4-213ENST00000545584 DCHS1Q96JQ0 3298 aa20.91■□□□□ 0.94
CHD4-213ENST00000545584 ANTXRLA6NF34 631 aa20.9■□□□□ 0.94
CHD4-213ENST00000545584 NEDD8-MDP1E9PL57 170 aa20.9■□□□□ 0.94
CHD4-213ENST00000545584 MDM4O15151 490 aa20.9■□□□□ 0.94
CHD4-213ENST00000545584 ZNF806P0C7X5 589 aa20.9■□□□□ 0.94
CHD4-213ENST00000545584 KIR2DL1P43626 348 aaPredicted RBP20.9■□□□□ 0.94
CHD4-213ENST00000545584 COG7P83436 770 aa20.9■□□□□ 0.94
CHD4-213ENST00000545584 CETN1Q12798 172 aa20.9■□□□□ 0.94
CHD4-213ENST00000545584 AASDHQ4L235 1098 aaPredicted RBP20.9■□□□□ 0.94
CHD4-213ENST00000545584 SGO2Q562F6 1265 aa20.9■□□□□ 0.94
CHD4-213ENST00000545584 EMC10Q5UCC4 262 aa20.9■□□□□ 0.94
CHD4-213ENST00000545584 GRAMD4Q6IC98 578 aa20.9■□□□□ 0.94
CHD4-213ENST00000545584 KLHL10Q6JEL2 608 aa20.9■□□□□ 0.94
CHD4-213ENST00000545584 TPGS1Q6ZTW0 290 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms