RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 DMAC2Q9NW81 257 aa8.2□□□□□ -1.1
SNHG1-223ENST00000545440 GPN3Q9UHW5 284 aaPredicted RBP8.2□□□□□ -1.1
SNHG1-223ENST00000545440 CDH9Q9ULB4 789 aa8.2□□□□□ -1.1
SNHG1-223ENST00000545440 TRAF3IP3Q9Y228 551 aa8.2□□□□□ -1.1
SNHG1-223ENST00000545440 NCANO14594 1321 aa8.2□□□□□ -1.1
SNHG1-223ENST00000545440 MYO15AQ9UKN7 3530 aa8.2□□□□□ -1.1
SNHG1-223ENST00000545440 KANSL1LA0AUZ9 987 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 LRRIQ3A6PVS8 624 aaPredicted RBP8.19□□□□□ -1.1
SNHG1-223ENST00000545440 PI15O43692 258 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 CALUO43852 315 aaPredicted RBP8.19□□□□□ -1.1
SNHG1-223ENST00000545440 NOL4O94818 638 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 FAM163BP0C2L3 166 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 CSH1P0DML2 217 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 CSH2P0DML3 217 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 HMGA1P17096 107 aaKnown RBP8.19□□□□□ -1.1
SNHG1-223ENST00000545440 DDX6P26196 483 aaKnown RBP eCLIP8.19□□□□□ -1.1
SNHG1-223ENST00000545440 ERCC5P28715 1186 aaPredicted RBP8.19□□□□□ -1.1
SNHG1-223ENST00000545440 MAGEA9P43362 315 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 MAGEA11P43364 429 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 RPL10AP62906 217 aaKnown RBP8.19□□□□□ -1.1
SNHG1-223ENST00000545440 TNNC1P63316 161 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 ENPEPQ07075 957 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 FCHO2Q0JRZ9 810 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 TRPC3Q13507 836 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 TAF12Q16514 161 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 SLC44A4Q53GD3 710 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 STXBP5Q5T5C0 1151 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 TDRD10Q5VZ19 366 aaKnown RBP8.19□□□□□ -1.1
SNHG1-223ENST00000545440 FAM171BQ6P995 826 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 VSTM1Q6UX27 236 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 C4orf50Q6ZRC1 276 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 TPRG1Q6ZUI0 275 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 SPATA2LQ8IUW3 424 aaPredicted RBP8.19□□□□□ -1.1
SNHG1-223ENST00000545440 RELL1Q8IUW5 271 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 MFSD6LQ8IWD5 586 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 GUF1Q8N442 669 aaKnown RBP8.19□□□□□ -1.1
SNHG1-223ENST00000545440 DTWD2Q8NBA8 298 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 PLEKHO2Q8TD55 490 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 PARD3BQ8TEW8 1205 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 MYLPFQ96A32 169 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 ACDQ96AP0 544 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 TRMT2BQ96GJ1 504 aaKnown RBP8.19□□□□□ -1.1
SNHG1-223ENST00000545440 MYRFLQ96LU7 910 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 CEP295NLQ96MC4 621 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 TCF12Q99081 682 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 PI4K2AQ9BTU6 479 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 FOXQ1Q9C009 403 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 XYLT2Q9H1B5 865 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 CLEC4MQ9H2X3 399 aaPredicted RBP8.19□□□□□ -1.1
SNHG1-223ENST00000545440 ATXN3LQ9H3M9 355 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 TASP1Q9H6P5 420 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 BRD9Q9H8M2 597 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 OBP2AQ9NY56 170 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 DLGAP2Q9P1A6 1054 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 UXTQ9UBK9 157 aaPredicted RBP8.19□□□□□ -1.1
SNHG1-223ENST00000545440 KLF15Q9UIH9 416 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 FRMD4BQ9Y2L6 1034 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 SIT1Q9Y3P8 196 aa8.19□□□□□ -1.1
SNHG1-223ENST00000545440 RIF1Q5UIP0 2472 aaKnown RBP8.18□□□□□ -1.1
SNHG1-223ENST00000545440 MYBPHLA2RUH7 354 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 GOLGA6L4A6NEF3 574 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 HEPACAM2A8MVW5 462 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 H0Y858 1186 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 ARNTLO00327 626 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 IKBKBO14920 756 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 OIP5O43482 229 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 HCRTO43612 131 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 ACPPP15309 386 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 NR2F2P24468 414 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 CYP2F1P24903 491 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 GDI1P31150 447 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 NBL1P41271 181 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 VIPR2P41587 438 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 CASP4P49662 377 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 GPR15P49685 360 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 MRE11P49959 708 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 MLLT6P55198 1093 aaPredicted RBP8.18□□□□□ -1.1
SNHG1-223ENST00000545440 NLRP12P59046 1061 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 MYL6P60660 151 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 PSMC1P62191 440 aaKnown RBP8.18□□□□□ -1.1
SNHG1-223ENST00000545440 FAM160A1Q05DH4 1040 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 BIRC3Q13489 604 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 CCDC142Q17RM4 750 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 ZNF699Q32M78 642 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 WDR72Q3MJ13 1102 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 ZCWPW2Q504Y3 356 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 GPR158Q5T848 1215 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 C1orf228Q6PIY5 440 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 TMEM150AQ86TG1 271 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 WFDC8Q8IUA0 241 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 ARID3BQ8IVW6 561 aaPredicted RBP8.18□□□□□ -1.1
SNHG1-223ENST00000545440 FMR1NBQ8N0W7 255 aaPredicted RBP8.18□□□□□ -1.1
SNHG1-223ENST00000545440 MYCBPAPQ8TBZ2 947 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 ATOH1Q92858 354 aaPredicted RBP8.18□□□□□ -1.1
SNHG1-223ENST00000545440 RSPRY1Q96DX4 576 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 MSANTD3Q96H12 275 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 PCED1BQ96HM7 432 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 MMS19Q96T76 1030 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 NELL2Q99435 816 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 KIF9Q9HAQ2 790 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms