RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 CPA3P15088 417 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 YWHAQP27348 245 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 CDC25CP30307 473 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 TFDP3Q5H9I0 405 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 NYAP1Q6ZVC0 841 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 C3orf20Q8ND61 904 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 HNRNPLLQ8WVV9 542 aaKnown RBP15.9■□□□□ 0.14
CHD4-210ENST00000544040 CEP44Q9C0F1 390 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 GPAMQ9HCL2 828 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 PIH1D1Q9NWS0 290 aaKnown RBP15.9■□□□□ 0.14
CHD4-210ENST00000544040 PRR12Q9ULL5 1215 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 PTGES3LE9PB15 166 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 H3BQF6 201 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 PHGDHO43175 533 aaKnown RBP15.9■□□□□ 0.14
CHD4-210ENST00000544040 ANXA11P50995 505 aaKnown RBP15.9■□□□□ 0.14
CHD4-210ENST00000544040 CLEC17AQ6ZS10 378 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 ACOT1Q86TX2 421 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 NT5DC3Q86UY8 548 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 PPP2R3CQ969Q6 453 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 RIBC2Q9H4K1 309 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 KCND2Q9NZV8 630 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 CPSF1Q10570 1443 aaKnown RBP15.89■□□□□ 0.13
CHD4-210ENST00000544040 IGSF9BQ9UPX0 1349 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 A0A0G2JLW4 131 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 PAX7P23759 505 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 STIP1P31948 543 aaKnown RBP15.89■□□□□ 0.13
CHD4-210ENST00000544040 RFC5P40937 340 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 ENKURQ8TC29 256 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 SPPL2AQ8TCT8 520 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 CCDC126Q96EE4 140 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 WHRNQ9P202 907 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 TBX20Q9UMR3 447 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 DYRK1BQ9Y463 629 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 R3HDM1Q15032 1099 aaKnown RBP15.89■□□□□ 0.13
CHD4-210ENST00000544040 PRAMEF18Q5VWM3 479 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 ATP8B4Q8TF62 1192 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 MED8Q96G25 268 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 CEP41Q9BYV8 373 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 VPS9D1Q9Y2B5 631 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 AAR2Q9Y312 384 aaKnown RBP15.89■□□□□ 0.13
CHD4-210ENST00000544040 TIMM44O43615 452 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 FGFR3P22607 806 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 KRT20P35900 424 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 SLC1A6P48664 564 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 POP1Q99575 1024 aaKnown RBP15.89■□□□□ 0.13
CHD4-210ENST00000544040 MXRA8Q9BRK3 442 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 MTMR12Q9C0I1 747 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 RXFP1Q9HBX9 757 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 DDX20Q9UHI6 824 aaKnown RBP15.89■□□□□ 0.13
CHD4-210ENST00000544040 KCNH4Q9UQ05 1017 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 UBDO15205 165 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 CCNT2O60583 730 aaKnown RBP15.89■□□□□ 0.13
CHD4-210ENST00000544040 ACO1P21399 889 aaKnown RBP15.89■□□□□ 0.13
CHD4-210ENST00000544040 NOS3P29474 1203 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 CCNG1P51959 295 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 CYP2R1Q6VVX0 501 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 FAM172AQ8WUF8 416 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 SYN2Q92777 582 aaPredicted RBP15.89■□□□□ 0.13
CHD4-210ENST00000544040 CAMKK2Q96RR4 588 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 KIFC1Q9BW19 673 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 PCDHB7Q9Y5E2 793 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 P4HA2O15460 535 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 PIK3R1P27986 724 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 SAPCD2Q86UD0 394 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 CYP4Z2PQ8N1L4 340 aa15.89■□□□□ 0.13
CHD4-210ENST00000544040 SMIM31A0A1B0GVY4 71 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 AP1G2O75843 785 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 CYP2B6P20813 491 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 FASP25445 335 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 SERPINH1P50454 418 aaKnown RBP15.88■□□□□ 0.13
CHD4-210ENST00000544040 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.88■□□□□ 0.13
CHD4-210ENST00000544040 VPS33AQ96AX1 596 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 POLR1BQ9H9Y6 1135 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 CDK12Q9NYV4 1490 aaPredicted RBP15.88■□□□□ 0.13
CHD4-210ENST00000544040 KANSL1LA0AUZ9 987 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 CENPXA8MT69 81 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 KPNA4O00629 521 aaPredicted RBP15.88■□□□□ 0.13
CHD4-210ENST00000544040 INPP4BO15327 924 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 CCNIQ14094 377 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 NR6A1Q15406 480 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 SLITRK1Q96PX8 696 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 KATNAL1Q9BW62 490 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 RAD21L1Q9H4I0 556 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 AGPAT3Q9NRZ7 376 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 SPACA6W5XKT8 324 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 O00370 1275 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 YY1P25490 414 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 TAF6P49848 677 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 ARMC3Q5W041 872 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 ATG9AQ7Z3C6 839 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 OSGEPQ9NPF4 335 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 F8VZ95 297 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 CYP2C9P11712 490 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 CLK2P49760 499 aaKnown RBP15.88■□□□□ 0.13
CHD4-210ENST00000544040 C21orf59P57076 290 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 GRIK3Q13003 919 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 STARD3Q14849 445 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 POLD3Q15054 466 aaPredicted RBP15.88■□□□□ 0.13
CHD4-210ENST00000544040 BOLA3Q53S33 107 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 GLB1LQ6UWU2 654 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms