RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 FAM107AO95990 144 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 GHRP10912 638 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 CCT5P48643 541 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 PITX1P78337 314 aaPredicted RBP14.76□□□□□ -0.05
LDB3-207ENST00000542786 MRPS5P82675 430 aaKnown RBP14.76□□□□□ -0.05
LDB3-207ENST00000542786 PPARDQ03181 441 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 PTK7Q13308 1070 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 FNBP1LQ5T0N5 605 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 CYP4X1Q8N118 509 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 ZMIZ2Q8NF64 920 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 MAML1Q92585 1016 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 P3H4Q92791 437 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 CCT8L2Q96SF2 557 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 NPY6RQ99463 290 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 SMOQ99835 787 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 SYT15Q9BQS2 421 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 NRDE2Q9H7Z3 1164 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 UBN1Q9NPG3 1134 aa14.76□□□□□ -0.05
LDB3-207ENST00000542786 DDX43Q9NXZ2 648 aaKnown RBP14.76□□□□□ -0.05
LDB3-207ENST00000542786 CWC15Q9P013 229 aaKnown RBP14.76□□□□□ -0.05
LDB3-207ENST00000542786 A0A0U1RQF3 1178 aa14.75□□□□□ -0.05
LDB3-207ENST00000542786 BCLAF3A2AJT9 711 aaKnown RBP14.75□□□□□ -0.05
LDB3-207ENST00000542786 AOC2O75106 756 aa14.75□□□□□ -0.05
LDB3-207ENST00000542786 CHN1P15882 459 aa14.75□□□□□ -0.05
LDB3-207ENST00000542786 CYP2F1P24903 491 aa14.75□□□□□ -0.05
LDB3-207ENST00000542786 STIP1P31948 543 aaKnown RBP14.75□□□□□ -0.05
LDB3-207ENST00000542786 LHX1P48742 406 aa14.75□□□□□ -0.05
LDB3-207ENST00000542786 RAB27AP51159 221 aa14.75□□□□□ -0.05
LDB3-207ENST00000542786 KCNJ11Q14654 390 aa14.75□□□□□ -0.05
LDB3-207ENST00000542786 SLC25A52Q3SY17 297 aa14.75□□□□□ -0.05
LDB3-207ENST00000542786 CCDC38Q502W7 563 aa14.75□□□□□ -0.05
LDB3-207ENST00000542786 TIGD5Q53EQ6 642 aa14.75□□□□□ -0.05
LDB3-207ENST00000542786 C1orf228Q6PIY5 440 aa14.75□□□□□ -0.05
LDB3-207ENST00000542786 TRAF7Q6Q0C0 670 aa14.75□□□□□ -0.05
LDB3-207ENST00000542786 VSTM1Q6UX27 236 aa14.75□□□□□ -0.05
LDB3-207ENST00000542786 B4GALNT4Q76KP1 1039 aa14.75□□□□□ -0.05
LDB3-207ENST00000542786 ZNF598Q86UK7 904 aaKnown RBP14.75□□□□□ -0.05
LDB3-207ENST00000542786 FAM35AQ86V20 835 aa14.75□□□□□ -0.05
LDB3-207ENST00000542786 TDRPQ86YL5 185 aa14.75□□□□□ -0.05
LDB3-207ENST00000542786 DEFB106AQ8N104 65 aa14.75□□□□□ -0.05
LDB3-207ENST00000542786 ZNF473Q8WTR7 871 aaKnown RBP14.75□□□□□ -0.05
LDB3-207ENST00000542786 MAK16Q9BXY0 300 aaKnown RBP14.75□□□□□ -0.05
LDB3-207ENST00000542786 KRT82Q9NSB4 513 aa14.75□□□□□ -0.05
LDB3-207ENST00000542786 AP4E1Q9UPM8 1137 aa14.75□□□□□ -0.05
LDB3-207ENST00000542786 A0A087WUV0 522 aaPredicted RBP14.74□□□□□ -0.05
LDB3-207ENST00000542786 MYBPHLA2RUH7 354 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 GMNCA6NCL1 334 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 C5orf60A6NFR6 353 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 HHLA1C9JL84 531 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 SMAPO00193 183 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 NRP1O14786 923 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 BANF1O75531 89 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 FYNP06241 537 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 CREB1P16220 341 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 MAGEA6P43360 314 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 NDUFV1P49821 464 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 CACNA2D1P54289 1103 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 BCAR1P56945 870 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 GPX6P59796 221 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 SLC10A2Q12908 348 aaPredicted RBP14.74□□□□□ -0.05
LDB3-207ENST00000542786 NOGQ13253 232 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 HIF1AQ16665 826 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 RAB41Q5JT25 222 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 DARS2Q6PI48 645 aaKnown RBP14.74□□□□□ -0.05
LDB3-207ENST00000542786 CENPUQ71F23 418 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 BHLHA9Q7RTU4 235 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 ZC3H18Q86VM9 953 aaKnown RBP14.74□□□□□ -0.05
LDB3-207ENST00000542786 CCDC13Q8IYE1 715 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 SMC1BQ8NDV3 1235 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 ARHGEF2Q92974 986 aaKnown RBP14.74□□□□□ -0.05
LDB3-207ENST00000542786 ZNF317Q96PQ6 595 aaPredicted RBP14.74□□□□□ -0.05
LDB3-207ENST00000542786 CSPG4P5Q96PW8 444 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 PKMYT1Q99640 499 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 CFHR5Q9BXR6 569 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 CCDC134Q9H6E4 229 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 TRMT13Q9NUP7 481 aaKnown RBP14.74□□□□□ -0.05
LDB3-207ENST00000542786 RSPH14Q9UHP6 348 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 NAALADL1Q9UQQ1 740 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.74□□□□□ -0.05
LDB3-207ENST00000542786 CASTOR2A6NHX0 329 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 FOXO6A8MYZ6 492 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 NDUFAB1O14561 156 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 CDH16O75309 829 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 CYP11A1P05108 521 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 FAM200BP0CF97 657 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 SP3Q02447 781 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 PDIA2Q13087 525 aaKnown RBP14.74□□□□□ -0.05
LDB3-207ENST00000542786 RASA2Q15283 850 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 HFE2Q6ZVN8 426 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 GPRIN1Q7Z2K8 1008 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 PSTKQ8IV42 348 aaKnown RBP14.74□□□□□ -0.05
LDB3-207ENST00000542786 RIBC1Q8N443 379 aaPredicted RBP14.74□□□□□ -0.05
LDB3-207ENST00000542786 PCSK9Q8NBP7 692 aaKnown RBP14.74□□□□□ -0.05
LDB3-207ENST00000542786 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.74□□□□□ -0.05
LDB3-207ENST00000542786 PCED1BQ96HM7 432 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 SRRDQ9UH36 339 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 CDH9Q9ULB4 789 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 FZD10Q9ULW2 581 aa14.74□□□□□ -0.05
LDB3-207ENST00000542786 TIMM13Q9Y5L4 95 aaPredicted RBP14.74□□□□□ -0.05
LDB3-207ENST00000542786 PTCH2Q9Y6C5 1203 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms