RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 RHOBTB1O94844 696 aa21.31■■□□□ 1
DDB1-220ENST00000542337 PGFP49763 221 aa21.31■■□□□ 1
DDB1-220ENST00000542337 PMS1P54277 932 aaKnown RBP21.31■■□□□ 1
DDB1-220ENST00000542337 CETN1Q12798 172 aa21.31■■□□□ 1
DDB1-220ENST00000542337 ELF2Q15723 593 aa21.31■■□□□ 1
DDB1-220ENST00000542337 CBWD6Q4V339 395 aa21.31■■□□□ 1
DDB1-220ENST00000542337 USP39Q53GS9 565 aaKnown RBP21.31■■□□□ 1
DDB1-220ENST00000542337 CBWD3Q5JTY5 395 aa21.31■■□□□ 1
DDB1-220ENST00000542337 CBWD5Q5RIA9 395 aa21.31■■□□□ 1
DDB1-220ENST00000542337 ISM2Q6H9L7 571 aa21.31■■□□□ 1
DDB1-220ENST00000542337 CCDC186Q7Z3E2 898 aa21.31■■□□□ 1
DDB1-220ENST00000542337 C11orf74Q86VG3 221 aa21.31■■□□□ 1
DDB1-220ENST00000542337 ARHGAP18Q8N392 663 aa21.31■■□□□ 1
DDB1-220ENST00000542337 CCDC33Q8N5R6 958 aa21.31■■□□□ 1
DDB1-220ENST00000542337 CEP63Q96MT8 703 aa21.31■■□□□ 1
DDB1-220ENST00000542337 MMP17Q9ULZ9 603 aa21.31■■□□□ 1
DDB1-220ENST00000542337 COQ4Q9Y3A0 265 aa21.31■■□□□ 1
DDB1-220ENST00000542337 HELZP42694 1942 aaKnown RBP21.3■■□□□ 1
DDB1-220ENST00000542337 A0A0A0MRY4 1105 aa21.3■■□□□ 1
DDB1-220ENST00000542337 TRIM49BA6NDI0 452 aa21.3■■□□□ 1
DDB1-220ENST00000542337 RAD23BP54727 409 aa21.3■■□□□ 1
DDB1-220ENST00000542337 KDSRQ06136 332 aa21.3■■□□□ 1
DDB1-220ENST00000542337 CUL2Q13617 745 aa21.3■■□□□ 1
DDB1-220ENST00000542337 CCDC40Q4G0X9 1142 aa21.3■■□□□ 1
DDB1-220ENST00000542337 EOGTQ5NDL2 527 aa21.3■■□□□ 1
DDB1-220ENST00000542337 ARHGAP17Q68EM7 881 aa21.3■■□□□ 1
DDB1-220ENST00000542337 KBTBD6Q86V97 674 aa21.3■■□□□ 1
DDB1-220ENST00000542337 NAT16Q8N8M0 369 aa21.3■■□□□ 1
DDB1-220ENST00000542337 SLC4A11Q8NBS3 891 aa21.3■■□□□ 1
DDB1-220ENST00000542337 ZC3H10Q96K80 434 aaKnown RBP21.3■■□□□ 1
DDB1-220ENST00000542337 XPO6Q96QU8 1125 aaKnown RBP21.3■■□□□ 1
DDB1-220ENST00000542337 NMUR1Q9HB89 426 aa21.3■■□□□ 1
DDB1-220ENST00000542337 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.3■■□□□ 1
DDB1-220ENST00000542337 WDR35Q9P2L0 1181 aa21.3■■□□□ 1
DDB1-220ENST00000542337 MAN1B1Q9UKM7 699 aa21.3■■□□□ 1
DDB1-220ENST00000542337 BICDL2A1A5D9 508 aa21.29■■□□□ 1
DDB1-220ENST00000542337 TBXAS1P24557 533 aaPredicted RBP21.29■■□□□ 1
DDB1-220ENST00000542337 TIE1P35590 1138 aa21.29■■□□□ 1
DDB1-220ENST00000542337 KLHL10Q6JEL2 608 aa21.29■■□□□ 1
DDB1-220ENST00000542337 PRR23CQ6ZRP0 262 aa21.29■■□□□ 1
DDB1-220ENST00000542337 TRMT11Q7Z4G4 463 aaKnown RBP21.29■■□□□ 1
DDB1-220ENST00000542337 C12orf40Q86WS4 652 aa21.29■■□□□ 1
DDB1-220ENST00000542337 TTC30AQ86WT1 665 aa21.29■■□□□ 1
DDB1-220ENST00000542337 TMEM25Q86YD3 366 aa21.29■■□□□ 1
DDB1-220ENST00000542337 ZNF276Q8N554 614 aa21.29■■□□□ 1
DDB1-220ENST00000542337 ANKRD52Q8NB46 1076 aa21.29■■□□□ 1
DDB1-220ENST00000542337 TXNDC5Q8NBS9 432 aaKnown RBP21.29■■□□□ 1
DDB1-220ENST00000542337 NETO1Q8TDF5 533 aa21.29■■□□□ 1
DDB1-220ENST00000542337 KCNV2Q8TDN2 545 aa21.29■■□□□ 1
DDB1-220ENST00000542337 ARID3AQ99856 593 aa21.29■■□□□ 1
DDB1-220ENST00000542337 RTKNQ9BST9 563 aa21.29■■□□□ 1
DDB1-220ENST00000542337 ARRDC1-AS1Q9H2J1 176 aa21.29■■□□□ 1
DDB1-220ENST00000542337 POLMQ9NP87 494 aaPredicted RBP21.29■■□□□ 1
DDB1-220ENST00000542337 OSER1Q9NX31 292 aa21.29■■□□□ 1
DDB1-220ENST00000542337 CLIC5Q9NZA1 410 aa21.29■■□□□ 1
DDB1-220ENST00000542337 HESX1Q9UBX0 185 aa21.29■■□□□ 1
DDB1-220ENST00000542337 ZNF510Q9Y2H8 683 aa21.29■■□□□ 1
DDB1-220ENST00000542337 PCDHGA5Q9Y5G8 931 aa21.29■■□□□ 1
DDB1-220ENST00000542337 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.29■■□□□ 1
DDB1-220ENST00000542337 USP3Q9Y6I4 520 aa21.29■■□□□ 1
DDB1-220ENST00000542337 DMXL1Q9Y485 3027 aa21.28■■□□□ 1
DDB1-220ENST00000542337 TULP3O75386 442 aa21.28■■□□□ 1
DDB1-220ENST00000542337 EPN2O95208 641 aa21.28■■□□□ 1
DDB1-220ENST00000542337 KLF8O95600 359 aaPredicted RBP21.28■■□□□ 1
DDB1-220ENST00000542337 ATXN1P54253 815 aaKnown RBP21.28■■□□□ 1
DDB1-220ENST00000542337 COG7P83436 770 aa21.28■■□□□ 1
DDB1-220ENST00000542337 CRY1Q16526 586 aa21.28■■□□□ 1
DDB1-220ENST00000542337 SGO2Q562F6 1265 aa21.28■■□□□ 1
DDB1-220ENST00000542337 ANO7Q6IWH7 933 aa21.28■■□□□ 1
DDB1-220ENST00000542337 ALLCQ8N6M5 410 aa21.28■■□□□ 1
DDB1-220ENST00000542337 C12orf50Q8NA57 414 aaPredicted RBP21.28■■□□□ 1
DDB1-220ENST00000542337 SLC35C1Q96A29 364 aa21.28■■□□□ 1
DDB1-220ENST00000542337 KIAA1257Q9ULG3 409 aa21.28■■□□□ 1
DDB1-220ENST00000542337 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.27■■□□□ 1
DDB1-220ENST00000542337 CD19P15391 556 aa21.27■■□□□ 1
DDB1-220ENST00000542337 GBP1P32455 592 aa21.27■■□□□ 1
DDB1-220ENST00000542337 LRMPQ12912 555 aa21.27■■□□□ 1
DDB1-220ENST00000542337 PLK5Q496M5 336 aa21.27■■□□□ 1
DDB1-220ENST00000542337 GRAMD4Q6IC98 578 aa21.27■■□□□ 1
DDB1-220ENST00000542337 RSRC2Q7L4I2 434 aaKnown RBP21.27■■□□□ 1
DDB1-220ENST00000542337 SCD5Q86SK9 330 aa21.27■■□□□ 1
DDB1-220ENST00000542337 PIGZQ86VD9 579 aa21.27■■□□□ 1
DDB1-220ENST00000542337 MIB1Q86YT6 1006 aa21.27■■□□□ 1
DDB1-220ENST00000542337 ETFBKMTQ8IXQ9 262 aa21.27■■□□□ 1
DDB1-220ENST00000542337 NELFBQ8WX92 580 aa21.27■■□□□ 1
DDB1-220ENST00000542337 WBP2Q969T9 261 aa21.27■■□□□ 1
DDB1-220ENST00000542337 CNOT6LQ96LI5 555 aaKnown RBP21.27■■□□□ 1
DDB1-220ENST00000542337 BBS2Q9BXC9 721 aa21.27■■□□□ 1
DDB1-220ENST00000542337 DNAJC17Q9NVM6 304 aaKnown RBP21.27■■□□□ 1
DDB1-220ENST00000542337 NUDT5Q9UKK9 219 aa21.27■■□□□ 1
DDB1-220ENST00000542337 STRIP2Q9ULQ0 834 aa21.27■■□□□ 1
DDB1-220ENST00000542337 NEDD8-MDP1E9PL57 170 aa21.26■□□□□ 0.99
DDB1-220ENST00000542337 MDM4O15151 490 aa21.26■□□□□ 0.99
DDB1-220ENST00000542337 ZBTB24O43167 697 aaPredicted RBP21.26■□□□□ 0.99
DDB1-220ENST00000542337 FMO5P49326 533 aa21.26■□□□□ 0.99
DDB1-220ENST00000542337 BCAT1P54687 386 aa21.26■□□□□ 0.99
DDB1-220ENST00000542337 GOLGA7BQ2TAP0 167 aa21.26■□□□□ 0.99
DDB1-220ENST00000542337 AASDHQ4L235 1098 aaPredicted RBP21.26■□□□□ 0.99
DDB1-220ENST00000542337 TPGS1Q6ZTW0 290 aa21.26■□□□□ 0.99
DDB1-220ENST00000542337 IL17RCQ8NAC3 791 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms