RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 ARVCFO00192 962 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 NBNO60934 754 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 RBP3P10745 1247 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 BDNFP23560 247 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 L1CAMP32004 1257 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 ACADSBP45954 432 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 GATMP50440 423 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 BOLA3Q53S33 107 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 ANKRD22Q5VYY1 191 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 SLAIN1Q8ND83 568 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 RSPH1Q8WYR4 309 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 PGBD4Q96DM1 585 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 C9orf72Q96LT7 481 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 MAK16Q9BXY0 300 aaKnown RBP17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 FOXO6A8MYZ6 492 aa17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 NUDT17P0C025 328 aa17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 OR4Q2P0C623 313 aa17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 CAPN2P17655 700 aa17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 MATKP42679 507 aa17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 BCAR1P56945 870 aa17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 YWHAZP63104 245 aaKnown RBP17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 FASTKD3Q14CZ7 662 aaKnown RBP17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 ZNF784Q8NCA9 323 aaPredicted RBP17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 KCTD15Q96SI1 283 aaPredicted RBP17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 TSEN34Q9BSV6 310 aaKnown RBP17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 ETNK2Q9NVF9 386 aa17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 NOVA2Q9UNW9 492 aaKnown RBP17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 NR2E3Q9Y5X4 410 aa17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 TCRBV7S3A2A0A539 114 aa17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 HHLA1C9JL84 531 aa17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 DNALI1O14645 258 aaPredicted RBP17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 RPL22P35268 128 aaKnown RBP17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 SULT1E1P49888 294 aa17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 SNX16P57768 344 aa17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 SLMAPQ14BN4 828 aa17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 ERMARDQ5T6L9 678 aa17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 SIX6OS1Q8N1H7 587 aa17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 STKLD1Q8NE28 680 aa17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 ANLNQ9NQW6 1124 aa17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 CDH9Q9ULB4 789 aa17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 ZNF638Q14966 1978 aaKnown RBP17.98■□□□□ 0.47
TMEM50B-210ENST00000542230 ODC1P11926 461 aa17.97■□□□□ 0.47
TMEM50B-210ENST00000542230 SLC8A3P57103 927 aa17.97■□□□□ 0.47
TMEM50B-210ENST00000542230 SLC10A2Q12908 348 aaPredicted RBP17.97■□□□□ 0.47
TMEM50B-210ENST00000542230 NME3Q13232 169 aa17.97■□□□□ 0.47
TMEM50B-210ENST00000542230 SLC24A5Q71RS6 500 aa17.97■□□□□ 0.47
TMEM50B-210ENST00000542230 KCTD13Q8WZ19 329 aa17.97■□□□□ 0.47
TMEM50B-210ENST00000542230 CYLDQ9NQC7 956 aa17.97■□□□□ 0.47
TMEM50B-210ENST00000542230 AP4E1Q9UPM8 1137 aa17.97■□□□□ 0.47
TMEM50B-210ENST00000542230 PRG3Q9Y2Y8 225 aaPredicted RBP17.97■□□□□ 0.47
TMEM50B-210ENST00000542230 GOLGA6L10A6NI86 522 aa17.97■□□□□ 0.47
TMEM50B-210ENST00000542230 I6L893 689 aaPredicted RBP17.97■□□□□ 0.47
TMEM50B-210ENST00000542230 IFI35P80217 286 aaPredicted RBP17.97■□□□□ 0.47
TMEM50B-210ENST00000542230 LMNB2Q03252 620 aa17.97■□□□□ 0.47
TMEM50B-210ENST00000542230 EFHC1Q5JVL4 640 aa17.97■□□□□ 0.47
TMEM50B-210ENST00000542230 RNASEH2BQ5TBB1 312 aaKnown RBP17.97■□□□□ 0.47
TMEM50B-210ENST00000542230 DBF4BQ8NFT6 615 aa17.97■□□□□ 0.47
TMEM50B-210ENST00000542230 EDEM1Q92611 657 aa17.97■□□□□ 0.47
TMEM50B-210ENST00000542230 PIGVQ9NUD9 493 aa17.97■□□□□ 0.47
TMEM50B-210ENST00000542230 NINJ2Q9NZG7 142 aa17.97■□□□□ 0.47
TMEM50B-210ENST00000542230 M0QZQ0 153 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 MDM4O15151 490 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 NR1D1P20393 614 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 CYP2F1P24903 491 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 GBE1Q04446 702 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 NOMO1Q15155 1222 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 LONRF1Q17RB8 773 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 SLC25A52Q3SY17 297 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 LRRC8DQ7L1W4 858 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 TEKT4Q8WW24 435 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 RSAD2Q8WXG1 361 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 P3H4Q92791 437 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 DEFB118Q96PH6 123 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 RBM15Q96T37 977 aaKnown RBP eCLIP17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 PKMYT1Q99640 499 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 CWC15Q9P013 229 aaKnown RBP17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 TPX2Q9ULW0 747 aaKnown RBP17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 PHF24Q9UPV7 400 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 TSC2P49815 1807 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 FRMPD3Q5JV73 1810 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 FAM163BP0C2L3 166 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 GOT1P17174 413 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 PGFP49763 221 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 MAGOHP61326 146 aaKnown RBP17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 GUCY1A3Q02108 690 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 OVOS1Q6IE37 1185 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 FAM171BQ6P995 826 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 DARS2Q6PI48 645 aaKnown RBP17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 GLB1LQ6UWU2 654 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 BHLHA9Q7RTU4 235 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 SCAMP5Q8TAC9 235 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 B3GALT6Q96L58 329 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 PCDH9Q9HC56 1237 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 TBC1D13Q9NVG8 400 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 PSD3Q9NYI0 1048 aa17.96■□□□□ 0.47
TMEM50B-210ENST00000542230 M0QYT0 321 aa17.95■□□□□ 0.46
TMEM50B-210ENST00000542230 MCF2LO15068 1137 aa17.95■□□□□ 0.46
TMEM50B-210ENST00000542230 GNRH1P01148 92 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms