RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 CEP55Q53EZ4 464 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 JAKMIP3Q5VZ66 844 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 TMEM200BQ69YZ2 307 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 PSRC1Q6PGN9 363 aaPredicted RBP6.02□□□□□ -1.45
CPSF7-220ENST00000541963 KLHDC10Q6PID8 442 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 GAREM2Q75VX8 874 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 NIPA1Q7RTP0 329 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 FAM129CQ86XR2 697 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 LYSMD2Q8IV50 215 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 TMEFF1Q8IYR6 380 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 CAGE1Q8TC20 777 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 TSPEARQ8WU66 669 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 SEPT1Q8WYJ6 367 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 PHKBQ93100 1093 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 UIMC1Q96RL1 719 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 TMEM168Q9H0V1 697 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 TRPV6Q9H1D0 765 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 PRDM12Q9H4Q4 367 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 BARX1Q9HBU1 254 aaPredicted RBP6.02□□□□□ -1.45
CPSF7-220ENST00000541963 IL23AQ9NPF7 189 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 TRMT13Q9NUP7 481 aaKnown RBP6.02□□□□□ -1.45
CPSF7-220ENST00000541963 EVLQ9UI08 416 aaPredicted RBP6.02□□□□□ -1.45
CPSF7-220ENST00000541963 DNAI1Q9UI46 699 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 VWA7Q9Y334 891 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.01□□□□□ -1.45
CPSF7-220ENST00000541963 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.01□□□□□ -1.45
CPSF7-220ENST00000541963 C17orf102A2RUQ5 167 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 HAS3O00219 553 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 AP1G1O43747 822 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 PFKFB2O60825 505 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 LGALS2P05162 132 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 CYP3A4P08684 503 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 PI3P19957 117 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 CYP2C18P33260 490 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 SREBF1P36956 1147 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 SARSP49591 514 aaKnown RBP6.01□□□□□ -1.45
CPSF7-220ENST00000541963 AK2P54819 239 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 CCL23P55773 120 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 TBX4P57082 545 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 SETQ01105 290 aaPredicted RBP6.01□□□□□ -1.45
CPSF7-220ENST00000541963 MEF2AQ02078 507 aaPredicted RBP6.01□□□□□ -1.45
CPSF7-220ENST00000541963 EIF4HQ15056 248 aaKnown RBP6.01□□□□□ -1.45
CPSF7-220ENST00000541963 PKN1Q16512 942 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 UTP14CQ5TAP6 766 aaKnown RBP6.01□□□□□ -1.45
CPSF7-220ENST00000541963 PPP4R3AQ6IN85 833 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 PLA2G4DQ86XP0 818 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 SLC41A1Q8IVJ1 513 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 AFAP1L1Q8TED9 768 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 KAT2BQ92831 832 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 GLG1Q92896 1179 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 HDAC10Q969S8 669 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 IL17RAQ96F46 866 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 ZSCAN31Q96LW9 406 aaPredicted RBP6.01□□□□□ -1.45
CPSF7-220ENST00000541963 GPR20Q99678 358 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 SMARCAD1Q9H4L7 1026 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 AZI2Q9H6S1 392 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 TBC1D22BQ9NU19 505 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 ERAP1Q9NZ08 941 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 VPS54Q9P1Q0 977 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 HDAC6Q9UBN7 1215 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 SLC9A2Q9UBY0 812 aa6.01□□□□□ -1.45
CPSF7-220ENST00000541963 NFASCO94856 1347 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 RRN3P2A6NIE6 340 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 VSTM5A8MXK1 200 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 ATP9AO75110 1047 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 PHF2O75151 1096 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 ZRANB2O95218 330 aaKnown RBP eCLIP6□□□□□ -1.45
CPSF7-220ENST00000541963 PLA2G1BP04054 148 aaKnown RBP6□□□□□ -1.45
CPSF7-220ENST00000541963 CELA3BP08861 270 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 POU2F2P09086 479 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 IQCF3P0C7M6 154 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 ZNF286BP0CG31 522 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 MED14OSP0DP75 135 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 CYP2C9P11712 490 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 CSF2RAP15509 400 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 KCNA2P16389 499 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 LPOP22079 712 aaPredicted RBP6□□□□□ -1.45
CPSF7-220ENST00000541963 ITGB8P26012 769 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 TCF7P36402 384 aaPredicted RBP6□□□□□ -1.45
CPSF7-220ENST00000541963 ETV4P43268 484 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 SP4Q02446 784 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 TRIM29Q14134 588 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 RTP5Q14D33 572 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 FAM160B1Q5W0V3 765 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 MCTP1Q6DN14 999 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 ZNF365Q70YC5 407 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 RSPH3Q86UC2 560 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 TMEM151BQ8IW70 566 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 REXO1L1PQ8IX06 675 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 BLIDQ8IZY5 108 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 GLB1L3Q8NCI6 653 aaPredicted RBP6□□□□□ -1.45
CPSF7-220ENST00000541963 NRG4Q8WWG1 115 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 ATP6V0A1Q93050 837 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 PGBD1Q96JS3 809 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 NAP1L4Q99733 375 aaKnown RBP6□□□□□ -1.45
CPSF7-220ENST00000541963 ZNF577Q9BSK1 485 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 C16orf70Q9BSU1 422 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 FTOQ9C0B1 505 aaKnown RBP eCLIP6□□□□□ -1.45
CPSF7-220ENST00000541963 HAPLN2Q9GZV7 340 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 AGO4Q9HCK5 861 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms