RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 RSPO2Q6UXX9 243 aaPredicted RBP12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 ARCQ7LC44 396 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 TAS1R1Q7RTX1 841 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 FAM131BQ86XD5 332 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 TTC9BQ8N6N2 239 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 EIF1ADQ8N9N8 165 aaKnown RBP12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 ATL2Q8NHH9 583 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 SCAMP5Q8TAC9 235 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 SLC35B2Q8TB61 432 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 APBB2Q92870 758 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 PWWP2AQ96N64 755 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 FAM193BQ96PV7 902 aaPredicted RBP12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 KCTD15Q96SI1 283 aaPredicted RBP12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 DNAI2Q9GZS0 605 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 ZCWPW1Q9H0M4 648 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 VIPAS39Q9H9C1 493 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 KANSL3Q9P2N6 904 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 RASAL2Q9UJF2 1139 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 LRFN2Q9ULH4 789 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 MFHAS1Q9Y4C4 1052 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 TADA2AO75478 443 aa12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 UPP2O95045 317 aa12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 L1CAMP32004 1257 aa12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 GGCXP38435 758 aa12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 DRG2P55039 364 aaKnown RBP12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 VCPP55072 806 aaKnown RBP12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 SLC8A3P57103 927 aa12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 SNX16P57768 344 aa12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 YWHAZP63104 245 aaKnown RBP12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 SLC39A12Q504Y0 691 aa12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 FAM171A1Q5VUB5 890 aa12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 TMC3Q7Z5M5 1100 aa12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 CEP57Q86XR8 500 aa12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 ABI1Q8IZP0 508 aa12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 MREGQ8N565 214 aa12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 PCDH19Q8TAB3 1148 aa12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 ART4Q93070 314 aa12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 NT5C3BQ969T7 300 aa12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 PAWRQ96IZ0 340 aaKnown RBP12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 TOX2Q96NM4 488 aa12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 ZIM3Q96PE6 472 aa12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 EPB41L4BQ9H329 900 aa12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 PIGVQ9NUD9 493 aa12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 ADAM28Q9UKQ2 775 aa12.8□□□□□ -0.36
AP003559.1-201ENST00000540906 OAZ2O95190 189 aa12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 MAP3K6O95382 1288 aa12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 VNN2O95498 520 aa12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 GALTP07902 379 aa12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 CHKAP35790 457 aa12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 HSD17B3P37058 310 aa12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 CETN2P41208 172 aa12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 BYSLQ13895 437 aaKnown RBP12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 SLC25A52Q3SY17 297 aa12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 IQCKQ8N0W5 287 aa12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 THEM5Q8N1Q8 247 aa12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 ALLCQ8N6M5 410 aa12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 FAM71BQ8TC56 605 aa12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 TEKT4Q8WW24 435 aa12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 EDEM1Q92611 657 aa12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 ARMC5Q96C12 935 aa12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 RUNDC3BQ96NL0 473 aa12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 RNF157Q96PX1 679 aa12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 TMEM121Q9BTD3 319 aa12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 DHX35Q9H5Z1 703 aaKnown RBP12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 AAASQ9NRG9 546 aa12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 ASIC3Q9UHC3 531 aa12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 AP4E1Q9UPM8 1137 aa12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 LTBP2Q14767 1821 aa12.79□□□□□ -0.36
AP003559.1-201ENST00000540906 TRIM43BA6NCK2 446 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 MDM4O15151 490 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 SOAT2O75908 522 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 ZBED1O96006 694 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 KRT14P02533 472 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 NOS2P35228 1153 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 GYS2P54840 703 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 TSPY1Q01534 308 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 MRPL58Q14197 206 aaKnown RBP12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 KRT81Q14533 505 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 BOLA3Q53S33 107 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 ANKRD20A8PQ5CZ79 823 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 PPP6R3Q5H9R7 873 aaPredicted RBP12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 RTP2Q5QGT7 225 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 ERMARDQ5T6L9 678 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 C1orf53Q5VUE5 145 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 DRICH1Q6PGQ1 229 aaPredicted RBP12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 C1orf228Q6PIY5 440 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 RHBDF2Q6PJF5 856 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 PLD5Q8N7P1 536 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 NETO2Q8NC67 525 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 OR2W6PQ8NHA6 318 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 NKD2Q969F2 451 aaPredicted RBP12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 TRIM43Q96BQ3 446 aaPredicted RBP12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 PGLYRP2Q96PD5 576 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 FMO2Q99518 471 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 VN1R3Q9BXE9 311 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 POPDC2Q9HBU9 364 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 DMAP1Q9NPF5 467 aaPredicted RBP12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 CNGB3Q9NQW8 809 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 TMEM39AQ9NV64 488 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 ETNK2Q9NVF9 386 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms