RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 FAXDC2Q96IV6 333 aa16.14■□□□□ 0.17
UBE3B-211ENST00000539843 CHAMP1Q96JM3 812 aa16.14■□□□□ 0.17
UBE3B-211ENST00000539843 CNTNAP3BQ96NU0 1288 aa16.14■□□□□ 0.17
UBE3B-211ENST00000539843 TSG101Q99816 390 aa16.14■□□□□ 0.17
UBE3B-211ENST00000539843 CNTNAP3Q9BZ76 1288 aa16.14■□□□□ 0.17
UBE3B-211ENST00000539843 CYLDQ9NQC7 956 aa16.14■□□□□ 0.17
UBE3B-211ENST00000539843 HMGXB4Q9UGU5 601 aa16.14■□□□□ 0.17
UBE3B-211ENST00000539843 DNMT3LQ9UJW3 386 aa16.14■□□□□ 0.17
UBE3B-211ENST00000539843 MAPK8IP1Q9UQF2 711 aa16.14■□□□□ 0.17
UBE3B-211ENST00000539843 INVSQ9Y283 1065 aa16.14■□□□□ 0.17
UBE3B-211ENST00000539843 RALGAPA1Q6GYQ0 2036 aa16.14■□□□□ 0.17
UBE3B-211ENST00000539843 A0A0A0MRY4 1105 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 FAM237AA0A1B0GTK4 181 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 TCRBV21S2A2A0A5A6 115 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 NEDD8-MDP1E9PL57 170 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 CETN3O15182 167 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 TULP3O75386 442 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 PLA2G4AP47712 749 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 MXI1P50539 228 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 E2F5Q15329 346 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 EDRF1Q3B7T1 1238 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 C10orf120Q5SQS8 335 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 KLHDC10Q6PID8 442 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 CLEC20AQ6ZU45 233 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 HTR3DQ70Z44 454 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 C12orf40Q86WS4 652 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 ARHGAP18Q8N392 663 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 TERB1Q8NA31 727 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 ZMIZ2Q8NF64 920 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 TAS1R2Q8TE23 839 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 ELMO3Q96BJ8 720 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 ZFRQ96KR1 1074 aaKnown RBP16.13■□□□□ 0.17
UBE3B-211ENST00000539843 BBS2Q9BXC9 721 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 GTPBP4Q9BZE4 634 aaKnown RBP16.13■□□□□ 0.17
UBE3B-211ENST00000539843 SMOC1Q9H4F8 434 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 FAM124BQ9H5Z6 455 aaPredicted RBP16.13■□□□□ 0.17
UBE3B-211ENST00000539843 DNAJC17Q9NVM6 304 aaKnown RBP16.13■□□□□ 0.17
UBE3B-211ENST00000539843 HOOK1Q9UJC3 728 aaKnown RBP16.13■□□□□ 0.17
UBE3B-211ENST00000539843 NAGPAQ9UK23 515 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 ZNF510Q9Y2H8 683 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 DMXL1Q9Y485 3027 aa16.13■□□□□ 0.17
UBE3B-211ENST00000539843 DNAH14Q0VDD8 3507 aa16.12■□□□□ 0.17
UBE3B-211ENST00000539843 SGK1O00141 431 aa16.12■□□□□ 0.17
UBE3B-211ENST00000539843 CILPO75339 1184 aa16.12■□□□□ 0.17
UBE3B-211ENST00000539843 BEST1O76090 585 aa16.12■□□□□ 0.17
UBE3B-211ENST00000539843 ZNF202O95125 648 aa16.12■□□□□ 0.17
UBE3B-211ENST00000539843 RARGP13631 454 aa16.12■□□□□ 0.17
UBE3B-211ENST00000539843 HOXB2P14652 356 aa16.12■□□□□ 0.17
UBE3B-211ENST00000539843 KIR2DL1P43626 348 aaPredicted RBP16.12■□□□□ 0.17
UBE3B-211ENST00000539843 LMAN2Q12907 356 aa16.12■□□□□ 0.17
UBE3B-211ENST00000539843 SPDYCQ5MJ68 293 aa16.12■□□□□ 0.17
UBE3B-211ENST00000539843 FBXL13Q8NEE6 735 aa16.12■□□□□ 0.17
UBE3B-211ENST00000539843 HEXIM2Q96MH2 286 aaKnown RBP16.12■□□□□ 0.17
UBE3B-211ENST00000539843 NUSAP1Q9BXS6 441 aaKnown RBP16.12■□□□□ 0.17
UBE3B-211ENST00000539843 TMEM9BQ9NQ34 198 aa16.12■□□□□ 0.17
UBE3B-211ENST00000539843 ANGPTL2Q9UKU9 493 aa16.12■□□□□ 0.17
UBE3B-211ENST00000539843 SPAG17Q6Q759 2223 aa16.12■□□□□ 0.17
UBE3B-211ENST00000539843 ATG2BQ96BY7 2078 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 CYP26A1O43174 497 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 AP5Z1O43299 807 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 PRR29P0C7W0 189 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 NTSR1P30989 418 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 P2RY2P41231 377 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 YWHAEP62258 255 aaKnown RBP16.11■□□□□ 0.17
UBE3B-211ENST00000539843 COG7P83436 770 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 PPP3CAQ08209 521 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 TCERG1LQ5VWI1 586 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 TCEAL6Q6IPX3 200 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 TMEM92Q6UXU6 159 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 SLC36A4Q6YBV0 504 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 TPGS1Q6ZTW0 290 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 CCDC186Q7Z3E2 898 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 RABEPKQ7Z6M1 372 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 TMEM25Q86YD3 366 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 ETFBKMTQ8IXQ9 262 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 CHPFQ8IZ52 775 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 PIGKQ92643 395 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 TCEAL3Q969E4 200 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 KLF16Q9BXK1 252 aaPredicted RBP16.11■□□□□ 0.17
UBE3B-211ENST00000539843 DUSP16Q9BY84 665 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 DCLK3Q9C098 648 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 STRIP2Q9ULQ0 834 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 SPTBN2O15020 2390 aa16.11■□□□□ 0.17
UBE3B-211ENST00000539843 FRYLO94915 3013 aa16.1■□□□□ 0.17
UBE3B-211ENST00000539843 A0A1W2PQH9 124 aa16.1■□□□□ 0.17
UBE3B-211ENST00000539843 CACNG3O60359 315 aa16.1■□□□□ 0.17
UBE3B-211ENST00000539843 ZNF217O75362 1048 aa16.1■□□□□ 0.17
UBE3B-211ENST00000539843 SMC2O95347 1197 aa16.1■□□□□ 0.17
UBE3B-211ENST00000539843 CYBBP04839 570 aa16.1■□□□□ 0.17
UBE3B-211ENST00000539843 TYRP14679 529 aa16.1■□□□□ 0.17
UBE3B-211ENST00000539843 CHKAP35790 457 aa16.1■□□□□ 0.17
UBE3B-211ENST00000539843 ATXN3P54252 364 aaPredicted RBP16.1■□□□□ 0.17
UBE3B-211ENST00000539843 ZNF394Q53GI3 561 aa16.1■□□□□ 0.17
UBE3B-211ENST00000539843 C1orf220Q5T0J3 134 aa16.1■□□□□ 0.17
UBE3B-211ENST00000539843 LYSMD4Q5XG99 296 aa16.1■□□□□ 0.17
UBE3B-211ENST00000539843 RSRC2Q7L4I2 434 aaKnown RBP16.1■□□□□ 0.17
UBE3B-211ENST00000539843 OLIG1Q8TAK6 271 aa16.1■□□□□ 0.17
UBE3B-211ENST00000539843 TWNKQ96RR1 684 aa16.1■□□□□ 0.17
UBE3B-211ENST00000539843 LSM14BQ9BX40 385 aaKnown RBP16.1■□□□□ 0.17
UBE3B-211ENST00000539843 APOBEC3GQ9HC16 384 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms