RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 PAX7P23759 505 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 GRIA1P42261 906 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 BCAR1P56945 870 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 ZBTB16Q05516 673 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 TAF11Q15544 211 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 SMAD1Q15797 465 aaKnown RBP12.44□□□□□ -0.42
CPNE8-203ENST00000538596 KHDC1Q4VXA5 237 aaKnown RBP12.44□□□□□ -0.42
CPNE8-203ENST00000538596 TRMT10BQ6PF06 316 aaKnown RBP12.44□□□□□ -0.42
CPNE8-203ENST00000538596 ACOT1Q86TX2 421 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 ALYREFQ86V81 257 aaKnown RBP12.44□□□□□ -0.42
CPNE8-203ENST00000538596 MPP5Q8N3R9 675 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 SNRNP25Q9BV90 132 aaKnown RBP12.44□□□□□ -0.42
CPNE8-203ENST00000538596 POPDC2Q9HBU9 364 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 NME7Q9Y5B8 376 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 MYO18AQ92614 2054 aaKnown RBP12.43□□□□□ -0.42
CPNE8-203ENST00000538596 TRAFD1O14545 582 aaPredicted RBP12.43□□□□□ -0.42
CPNE8-203ENST00000538596 COPEO14579 308 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 CHADO15335 359 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 HBP1O60381 514 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 ZBED1O96006 694 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 MYL2P10916 166 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 ABL2P42684 1182 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 CPA2P48052 419 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 RASSF2P50749 326 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 SESN3P58005 492 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 MRPS5P82675 430 aaKnown RBP12.43□□□□□ -0.42
CPNE8-203ENST00000538596 TFDP2Q14188 446 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 ACAP1Q15027 740 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 TTC30AQ86WT1 665 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 MAB21L3Q8N8X9 362 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 ARMC2Q8NEN0 867 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 CLEC4CQ8WTT0 213 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 KHSRPQ92945 711 aaKnown RBP eCLIP12.43□□□□□ -0.42
CPNE8-203ENST00000538596 PTCD3Q96EY7 689 aaKnown RBP12.43□□□□□ -0.42
CPNE8-203ENST00000538596 MRPL45Q9BRJ2 306 aaKnown RBP12.43□□□□□ -0.42
CPNE8-203ENST00000538596 MAF1Q9H063 256 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 GBA2Q9HCG7 927 aaPredicted RBP12.43□□□□□ -0.42
CPNE8-203ENST00000538596 PCDH18Q9HCL0 1135 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 ETNK2Q9NVF9 386 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 PRMT7Q9NVM4 692 aaPredicted RBP12.43□□□□□ -0.42
CPNE8-203ENST00000538596 DPP3Q9NY33 737 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 CNTN3Q9P232 1028 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 RBPJLQ9UBG7 517 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 METTL18O95568 372 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 ZNF286BP0CG31 522 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 CSH1P0DML2 217 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 CSH2P0DML3 217 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 PHKA2P46019 1235 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 GBE1Q04446 702 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 FAM47CQ5HY64 1035 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 LCLAT1Q6UWP7 414 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 RINLQ6ZS11 566 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 SLC26A11Q86WA9 606 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 PPP1R13LQ8WUF5 828 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 SKA1Q96BD8 255 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 PIH1D1Q9NWS0 290 aaKnown RBP12.43□□□□□ -0.42
CPNE8-203ENST00000538596 MARCOQ9UEW3 520 aaPredicted RBP12.43□□□□□ -0.42
CPNE8-203ENST00000538596 LNPEPQ9UIQ6 1025 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 PPME1Q9Y570 386 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 CSADQ9Y600 493 aa12.43□□□□□ -0.42
CPNE8-203ENST00000538596 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.42□□□□□ -0.42
CPNE8-203ENST00000538596 APOL1O14791 398 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 KITP10721 976 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 CDK16Q00536 496 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 SLC10A2Q12908 348 aaPredicted RBP12.42□□□□□ -0.42
CPNE8-203ENST00000538596 CRYMQ14894 314 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 HSF5Q4G112 596 aaPredicted RBP12.42□□□□□ -0.42
CPNE8-203ENST00000538596 MDH1BQ5I0G3 518 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 OLFML1Q6UWY5 402 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 APBB1IPQ7Z5R6 666 aaPredicted RBP12.42□□□□□ -0.42
CPNE8-203ENST00000538596 CHSY1Q86X52 802 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 UNC5BQ8IZJ1 945 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 ZNF398Q8TD17 642 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 NMUR2Q9GZQ4 415 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 CYP3A43Q9HB55 503 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 SAR1AQ9NR31 198 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 PAK5Q9P286 719 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 SLC17A6Q9P2U8 582 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 MFHAS1Q9Y4C4 1052 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 MAD1L1Q9Y6D9 718 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 SLC15A5A6NIM6 579 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 SMAPO00193 183 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 MCF2P10911 925 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 OSBPP22059 807 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 PTDSS1P48651 473 aaKnown RBP12.42□□□□□ -0.42
CPNE8-203ENST00000538596 ERFP50548 548 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 SLC8A3P57103 927 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 INCA1Q0VD86 236 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 MROH9Q5TGP6 573 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 TTC39BQ5VTQ0 682 aaPredicted RBP12.42□□□□□ -0.42
CPNE8-203ENST00000538596 UNC5AQ6ZN44 842 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 C4orf50Q6ZRC1 276 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 RFX8Q6ZV50 586 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 FBXO27Q8NI29 283 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 KIF12Q96FN5 646 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 ACAP3Q96P50 834 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 MMP19Q99542 508 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 NT5C1AQ9BXI3 368 aa12.42□□□□□ -0.42
CPNE8-203ENST00000538596 IQCGQ9H095 443 aaKnown RBP12.42□□□□□ -0.42
CPNE8-203ENST00000538596 TLE6Q9H808 572 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms