RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 FGBP02675 491 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 ITGALP20701 1170 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 HSPA9P38646 679 aaKnown RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 MRNIPQ6NTE8 343 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 ZPBP2Q6X784 338 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 TRMT11Q7Z4G4 463 aaKnown RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 PTAR1Q7Z6K3 402 aaPredicted RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 PPTC7Q8NI37 304 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 MTBPQ96DY7 904 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 ABHD8Q96I13 439 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 SERPINB11Q96P15 392 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 CLPBQ9H078 707 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 RAD18Q9NS91 495 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 VANGL2Q9ULK5 521 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 UBIAD1Q9Y5Z9 338 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 FRMD3A2A2Y4 597 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 SEPT4O43236 478 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 MAFO75444 373 aaPredicted RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 TADA3O75528 432 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 LSM8O95777 96 aaKnown RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 RPSAP08865 295 aaKnown RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 PTPN1P18031 435 aaKnown RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 UGCGQ16739 394 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 TTI2Q6NXR4 508 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 C4orf22Q6V702 233 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 C11orf74Q86VG3 221 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 DEFB106AQ8N104 65 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 TMEM86AQ8N2M4 240 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 GRIN3AQ8TCU5 1115 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 SUSD6Q92537 303 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 CCDC3Q9BQI4 270 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 ZSWIM1Q9BR11 485 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 FAM129AQ9BZQ8 928 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 SUFUQ9UMX1 484 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 A0A087X0T9 212 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 CCL16O15467 120 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 ATP9AO75110 1047 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 FAM228BP0C875 321 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 EIF4BP23588 611 aaKnown RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 CENPAP49450 140 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 TRADDQ15628 312 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 SPOCD1Q6ZMY3 1216 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 PLPPR4Q7Z2D5 763 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 DENND1CQ8IV53 801 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 MED8Q96G25 268 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 C17orf80Q9BSJ5 609 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 ULBP1Q9BZM6 244 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 TKTL2Q9H0I9 626 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 RBM22Q9NW64 420 aaKnown RBP eCLIP5.53□□□□□ -1.52
LRP6-203ENST00000538239 TEKT2Q9UIF3 430 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 RUVBL2Q9Y230 463 aaKnown RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 PIK3C2AO00443 1686 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 CLASP2O75122 1294 aaKnown RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 VPS26AO75436 327 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 PSMD10O75832 226 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 ASGR1P07306 291 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 ADH1AP07327 375 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 KRT4P19013 534 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 PLA2G4AP47712 749 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 CCZ1BP86790 482 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 CCZ1P86791 482 aaPredicted RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 AARS2Q5JTZ9 985 aaKnown RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 DDX42Q86XP3 938 aaKnown RBP eCLIP5.53□□□□□ -1.52
LRP6-203ENST00000538239 ELOA2Q8IYF1 753 aaPredicted RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 ABRAQ8N0Z2 381 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 ENGASEQ8NFI3 743 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 OR2W6PQ8NHA6 318 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 TMEM134Q9H6X4 195 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 RAB23Q9ULC3 237 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 PNMA8BQ9ULN7 279 aaPredicted RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 CDYLQ9Y232 598 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 RPS6KL1Q9Y6S9 549 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 SLIT3O75094 1523 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 MOXD2PA6NHM9 499 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 B4GALT5O43286 388 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 IGSF6O95976 241 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 LMNAP02545 664 aaKnown RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 ENO1P06733 434 aaKnown RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 DLG4P78352 724 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 HPCAP84074 193 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 STX3Q13277 289 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 PSMD5Q16401 504 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 KCNK18Q7Z418 384 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 MYO1HQ8N1T3 1032 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 COLGALT1Q8NBJ5 622 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 CXorf38Q8TB03 319 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 JADE3Q92613 823 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 MYLPFQ96A32 169 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 OTUB1Q96FW1 271 aaPredicted RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 TSEN34Q9BSV6 310 aaKnown RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 TMEM121Q9BTD3 319 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 TLE6Q9H808 572 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 NPHS2Q9NP85 383 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 STX18Q9P2W9 335 aaKnown RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 DDX20Q9UHI6 824 aaKnown RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 DYRK1BQ9Y463 629 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 RIPK3Q9Y572 518 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 RGPD8O14715 1765 aaPredicted RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 IFRD1O00458 451 aaPredicted RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 CAND2O75155 1236 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms