RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 LRRC32Q14392 662 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 GRM7Q14831 915 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 RALBP1Q15311 655 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 TBR1Q16650 682 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 SYDE2Q5VT97 1194 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 MBNL2Q5VZF2 373 aaKnown RBP4.51□□□□□ -1.69
YBX3-205ENST00000536107 TMED8Q6PL24 325 aaPredicted RBP4.51□□□□□ -1.69
YBX3-205ENST00000536107 CCNI2Q6ZMN8 369 aaPredicted RBP4.51□□□□□ -1.69
YBX3-205ENST00000536107 LRRC55Q6ZSA7 311 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 SPATA31D4Q6ZUB0 917 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 SLC39A11Q8N1S5 342 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 D2HGDHQ8N465 521 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 HDDC3Q8N4P3 179 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 PNPLA1Q8N8W4 532 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 FAM3CQ92520 227 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 MKL1Q969V6 931 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 CEP95Q96GE4 821 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 TAAR1Q96RJ0 339 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 RMDN3Q96TC7 470 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 TRIM4Q9C037 500 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 ZBP1Q9H171 429 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 TMX1Q9H3N1 280 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 ATP8A2Q9NTI2 1148 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 TMEM161AQ9NX61 479 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 HECAQ9UBI9 543 aaPredicted RBP4.51□□□□□ -1.69
YBX3-205ENST00000536107 ZNHIT2Q9UHR6 403 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 TUBE1Q9UJT0 475 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 PACSIN3Q9UKS6 424 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 CDH7Q9ULB5 785 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 TRPV2Q9Y5S1 764 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 CELSR3Q9NYQ7 3312 aa4.51□□□□□ -1.69
YBX3-205ENST00000536107 ITPR3Q14573 2671 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 ZNF532Q9HCE3 1301 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 ZAR1LA6NP61 321 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 K7ESF4 209 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 CDX4O14627 284 aaPredicted RBP4.5□□□□□ -1.69
YBX3-205ENST00000536107 PLA2G6O60733 806 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 ZC3H11AO75152 810 aaKnown RBP eCLIP4.5□□□□□ -1.69
YBX3-205ENST00000536107 RPS6KA5O75582 802 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 PRDM1O75626 825 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 MBD4O95243 580 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 GLUD1P00367 558 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 CFBP00751 764 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 CNPP09543 421 aaKnown RBP4.5□□□□□ -1.69
YBX3-205ENST00000536107 LCP1P13796 627 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 PDE6AP16499 860 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 ITPKBP27987 946 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 AK2P54819 239 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 BCAR1P56945 870 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 SP4Q02446 784 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 LY6DQ14210 128 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 PCOLCEQ15113 449 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 USH1GQ495M9 461 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 TNNI3KQ59H18 835 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 ZNF362Q5T0B9 420 aaPredicted RBP4.5□□□□□ -1.69
YBX3-205ENST00000536107 KCNV1Q6PIU1 500 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 DDX53Q86TM3 631 aaKnown RBP4.5□□□□□ -1.69
YBX3-205ENST00000536107 OR6P1Q8NGX9 317 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 CASD1Q96PB1 797 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 IWS1Q96ST2 819 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 RANBP17Q9H2T7 1088 aaKnown RBP4.5□□□□□ -1.69
YBX3-205ENST00000536107 CDIP1Q9H305 208 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 PRORYQ9H606 182 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 BRD9Q9H8M2 597 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 ZNF287Q9HBT7 754 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 MRPL17Q9NRX2 175 aaKnown RBP4.5□□□□□ -1.69
YBX3-205ENST00000536107 RGS18Q9NS28 235 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 MTMR4Q9NYA4 1195 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 PNMA2Q9UL42 364 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 HEMK1Q9Y5R4 338 aaPredicted RBP4.5□□□□□ -1.69
YBX3-205ENST00000536107 SQORQ9Y6N5 450 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 FPGT-TNNI3KV9GXZ4 949 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 ZMYM2Q9UBW7 1377 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 CREBBPQ92793 2442 aa4.5□□□□□ -1.69
YBX3-205ENST00000536107 MYH1P12882 1939 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 TICRRQ7Z2Z1 1910 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 RRP8O43159 456 aaKnown RBP4.49□□□□□ -1.69
YBX3-205ENST00000536107 MGEA5O60502 916 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 MAFO75444 373 aaPredicted RBP4.49□□□□□ -1.69
YBX3-205ENST00000536107 RPLP2P05387 115 aaKnown RBP4.49□□□□□ -1.69
YBX3-205ENST00000536107 TSPY3P0CV98 308 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 TSPY8P0CW00 308 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 UBA1P22314 1058 aaKnown RBP4.49□□□□□ -1.69
YBX3-205ENST00000536107 MARK3P27448 753 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 PTGS2P35354 604 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 ECI1P42126 302 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 GIPRP48546 466 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 FAM193AP78312 1265 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 RNASELQ05823 741 aaKnown RBP4.49□□□□□ -1.69
YBX3-205ENST00000536107 LMAN2Q12907 356 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 TUSC3Q13454 348 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 SERINC3Q13530 473 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 TTF1Q15361 905 aaPredicted RBP4.49□□□□□ -1.69
YBX3-205ENST00000536107 ODR4Q5SWX8 454 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 CTR9Q6PD62 1173 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 CCDC81Q6ZN84 652 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 USP30Q70CQ3 517 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 GRASPQ7Z6J2 395 aaPredicted RBP4.49□□□□□ -1.69
YBX3-205ENST00000536107 MRGPREQ86SM8 312 aa4.49□□□□□ -1.69
YBX3-205ENST00000536107 ADGRG3Q86Y34 549 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms