RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 CLIC5Q9NZA1 410 aa18.77■□□□□ 0.6
DDX55-204ENST00000536079 CFAP97Q9P2B7 532 aa18.77■□□□□ 0.6
DDX55-204ENST00000536079 FBXL21Q9UKT6 434 aa18.77■□□□□ 0.6
DDX55-204ENST00000536079 COL4A2P08572 1712 aa18.77■□□□□ 0.59
DDX55-204ENST00000536079 GREM1O60565 184 aa18.76■□□□□ 0.59
DDX55-204ENST00000536079 GPR37L1O60883 481 aa18.76■□□□□ 0.59
DDX55-204ENST00000536079 ERBB2P04626 1255 aa18.76■□□□□ 0.59
DDX55-204ENST00000536079 IRF1P10914 325 aa18.76■□□□□ 0.59
DDX55-204ENST00000536079 SOX9P48436 509 aa18.76■□□□□ 0.59
DDX55-204ENST00000536079 PDE6CP51160 858 aa18.76■□□□□ 0.59
DDX55-204ENST00000536079 FMO1Q01740 532 aa18.76■□□□□ 0.59
DDX55-204ENST00000536079 ARID5AQ03989 594 aa18.76■□□□□ 0.59
DDX55-204ENST00000536079 TAF5Q15542 800 aa18.76■□□□□ 0.59
DDX55-204ENST00000536079 PTPN20Q4JDL3 420 aa18.76■□□□□ 0.59
DDX55-204ENST00000536079 C10orf120Q5SQS8 335 aa18.76■□□□□ 0.59
DDX55-204ENST00000536079 BSPRYQ5W0U4 402 aa18.76■□□□□ 0.59
DDX55-204ENST00000536079 OLIG1Q8TAK6 271 aa18.76■□□□□ 0.59
DDX55-204ENST00000536079 EBF3Q9H4W6 596 aa18.76■□□□□ 0.59
DDX55-204ENST00000536079 DAAM1Q9Y4D1 1078 aa18.76■□□□□ 0.59
DDX55-204ENST00000536079 CD72P21854 359 aa18.75■□□□□ 0.59
DDX55-204ENST00000536079 CDH5P33151 784 aaPredicted RBP18.75■□□□□ 0.59
DDX55-204ENST00000536079 ATP5C1P36542 298 aaKnown RBP18.75■□□□□ 0.59
DDX55-204ENST00000536079 EFEMP1Q12805 493 aa18.75■□□□□ 0.59
DDX55-204ENST00000536079 ARHGAP29Q52LW3 1261 aa18.75■□□□□ 0.59
DDX55-204ENST00000536079 C2CD6Q53TS8 623 aa18.75■□□□□ 0.59
DDX55-204ENST00000536079 CWF19L1Q69YN2 538 aaKnown RBP18.75■□□□□ 0.59
DDX55-204ENST00000536079 IRF2BP2Q7Z5L9 587 aa18.75■□□□□ 0.59
DDX55-204ENST00000536079 MIB1Q86YT6 1006 aa18.75■□□□□ 0.59
DDX55-204ENST00000536079 ZNF276Q8N554 614 aa18.75■□□□□ 0.59
DDX55-204ENST00000536079 IRF7Q92985 503 aa18.75■□□□□ 0.59
DDX55-204ENST00000536079 CHFRQ96EP1 664 aa18.75■□□□□ 0.59
DDX55-204ENST00000536079 PPP1R13BQ96KQ4 1090 aa18.75■□□□□ 0.59
DDX55-204ENST00000536079 LRFN3Q9BTN0 628 aa18.75■□□□□ 0.59
DDX55-204ENST00000536079 ARHGEF3Q9NR81 526 aa18.75■□□□□ 0.59
DDX55-204ENST00000536079 MTF2Q9Y483 593 aaPredicted RBP18.75■□□□□ 0.59
DDX55-204ENST00000536079 KIF26AQ9ULI4 1882 aaPredicted RBP18.75■□□□□ 0.59
DDX55-204ENST00000536079 LRRC53A6NM62 1247 aa18.74■□□□□ 0.59
DDX55-204ENST00000536079 PI15O43692 258 aa18.74■□□□□ 0.59
DDX55-204ENST00000536079 RALAP11233 206 aa18.74■□□□□ 0.59
DDX55-204ENST00000536079 PSEN1P49768 467 aa18.74■□□□□ 0.59
DDX55-204ENST00000536079 CDR2Q01850 454 aa18.74■□□□□ 0.59
DDX55-204ENST00000536079 MLF2Q15773 248 aaPredicted RBP18.74■□□□□ 0.59
DDX55-204ENST00000536079 EML3Q32P44 896 aa18.74■□□□□ 0.59
DDX55-204ENST00000536079 TMEM31Q5JXX7 168 aa18.74■□□□□ 0.59
DDX55-204ENST00000536079 BTBD8Q5XKL5 378 aa18.74■□□□□ 0.59
DDX55-204ENST00000536079 NAIF1Q69YI7 327 aaPredicted RBP18.74■□□□□ 0.59
DDX55-204ENST00000536079 KLHDC10Q6PID8 442 aa18.74■□□□□ 0.59
DDX55-204ENST00000536079 CACNA2D4Q7Z3S7 1137 aa18.74■□□□□ 0.59
DDX55-204ENST00000536079 ARHGAP18Q8N392 663 aa18.74■□□□□ 0.59
DDX55-204ENST00000536079 OSCP1Q8WVF1 389 aa18.74■□□□□ 0.59
DDX55-204ENST00000536079 CPA5Q8WXQ8 436 aa18.74■□□□□ 0.59
DDX55-204ENST00000536079 IRGQQ8WZA9 623 aa18.74■□□□□ 0.59
DDX55-204ENST00000536079 DNASE1L2Q92874 299 aa18.74■□□□□ 0.59
DDX55-204ENST00000536079 PBXIP1Q96AQ6 731 aa18.74■□□□□ 0.59
DDX55-204ENST00000536079 NACA2Q9H009 215 aa18.74■□□□□ 0.59
DDX55-204ENST00000536079 TRPV5Q9NQA5 729 aa18.74■□□□□ 0.59
DDX55-204ENST00000536079 DUS2Q9NX74 493 aaKnown RBP18.74■□□□□ 0.59
DDX55-204ENST00000536079 SFMBT1Q9UHJ3 866 aa18.74■□□□□ 0.59
DDX55-204ENST00000536079 RASAL2Q9UJF2 1139 aa18.74■□□□□ 0.59
DDX55-204ENST00000536079 DNMT3LQ9UJW3 386 aa18.74■□□□□ 0.59
DDX55-204ENST00000536079 FBXO21O94952 628 aa18.73■□□□□ 0.59
DDX55-204ENST00000536079 LTFP02788 710 aa18.73■□□□□ 0.59
DDX55-204ENST00000536079 HMBSP08397 361 aa18.73■□□□□ 0.59
DDX55-204ENST00000536079 ACADSBP45954 432 aa18.73■□□□□ 0.59
DDX55-204ENST00000536079 NOMO3P69849 1222 aa18.73■□□□□ 0.59
DDX55-204ENST00000536079 PFKPQ01813 784 aa18.73■□□□□ 0.59
DDX55-204ENST00000536079 NAA35Q5VZE5 725 aa18.73■□□□□ 0.59
DDX55-204ENST00000536079 TXNDC11Q6PKC3 985 aa18.73■□□□□ 0.59
DDX55-204ENST00000536079 FAM183BPQ6ZVS7 135 aa18.73■□□□□ 0.59
DDX55-204ENST00000536079 SYT11Q9BT88 431 aa18.73■□□□□ 0.59
DDX55-204ENST00000536079 C1QTNF1Q9BXJ1 281 aa18.73■□□□□ 0.59
DDX55-204ENST00000536079 FOXQ1Q9C009 403 aa18.73■□□□□ 0.59
DDX55-204ENST00000536079 TBC1D17Q9HA65 648 aa18.73■□□□□ 0.59
DDX55-204ENST00000536079 THG1LQ9NWX6 298 aaKnown RBP18.73■□□□□ 0.59
DDX55-204ENST00000536079 NAALADL1Q9UQQ1 740 aa18.73■□□□□ 0.59
DDX55-204ENST00000536079 HELZP42694 1942 aaKnown RBP18.72■□□□□ 0.59
DDX55-204ENST00000536079 KLKB1P03952 638 aa18.72■□□□□ 0.59
DDX55-204ENST00000536079 CYP1A1P04798 512 aaPredicted RBP18.72■□□□□ 0.59
DDX55-204ENST00000536079 VCPP55072 806 aaKnown RBP18.72■□□□□ 0.59
DDX55-204ENST00000536079 STARD6P59095 220 aa18.72■□□□□ 0.59
DDX55-204ENST00000536079 PITX1P78337 314 aaPredicted RBP18.72■□□□□ 0.59
DDX55-204ENST00000536079 RUNX3Q13761 415 aa18.72■□□□□ 0.59
DDX55-204ENST00000536079 CC2D1AQ6P1N0 951 aaPredicted RBP18.72■□□□□ 0.59
DDX55-204ENST00000536079 TPRG1Q6ZUI0 275 aa18.72■□□□□ 0.59
DDX55-204ENST00000536079 BMP8AQ7Z5Y6 402 aa18.72■□□□□ 0.59
DDX55-204ENST00000536079 BBS7Q8IWZ6 715 aa18.72■□□□□ 0.59
DDX55-204ENST00000536079 TMEM35BQ8NCS4 154 aa18.72■□□□□ 0.59
DDX55-204ENST00000536079 FLCNQ8NFG4 579 aa18.72■□□□□ 0.59
DDX55-204ENST00000536079 P2RY11Q96G91 374 aa18.72■□□□□ 0.59
DDX55-204ENST00000536079 DDX23Q9BUQ8 820 aaKnown RBP18.72■□□□□ 0.59
DDX55-204ENST00000536079 PDCL3Q9H2J4 239 aa18.72■□□□□ 0.59
DDX55-204ENST00000536079 MARCH2Q9P0N8 246 aa18.72■□□□□ 0.59
DDX55-204ENST00000536079 PIAS3Q9Y6X2 628 aa18.72■□□□□ 0.59
DDX55-204ENST00000536079 TICRRQ7Z2Z1 1910 aa18.72■□□□□ 0.59
DDX55-204ENST00000536079 SLC12A8A0AV02 714 aa18.71■□□□□ 0.59
DDX55-204ENST00000536079 PRR33A8MZF0 331 aa18.71■□□□□ 0.59
DDX55-204ENST00000536079 MSI1O43347 362 aaKnown RBP18.71■□□□□ 0.59
DDX55-204ENST00000536079 GRAP2O75791 330 aa18.71■□□□□ 0.59
DDX55-204ENST00000536079 STC2O76061 302 aa18.71■□□□□ 0.59
DDX55-204ENST00000536079 PLCB2Q00722 1185 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms