RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 P2RY13Q9BPV8 354 aa9.34□□□□□ -0.91
CHD4-204ENST00000535810 FAM126AQ9BYI3 521 aaPredicted RBP9.34□□□□□ -0.91
CHD4-204ENST00000535810 DNAI2Q9GZS0 605 aa9.34□□□□□ -0.91
CHD4-204ENST00000535810 FBXO44Q9H4M3 255 aa9.34□□□□□ -0.91
CHD4-204ENST00000535810 CCSER2Q9H7U1 834 aa9.34□□□□□ -0.91
CHD4-204ENST00000535810 FBRSL1Q9HCM7 1045 aaKnown RBP9.34□□□□□ -0.91
CHD4-204ENST00000535810 PNPLA8Q9NP80 782 aa9.34□□□□□ -0.91
CHD4-204ENST00000535810 C2orf42Q9NWW7 574 aa9.34□□□□□ -0.91
CHD4-204ENST00000535810 CFAP97Q9P2B7 532 aa9.34□□□□□ -0.91
CHD4-204ENST00000535810 CHORDC1Q9UHD1 332 aaPredicted RBP9.34□□□□□ -0.91
CHD4-204ENST00000535810 K7ESF4 209 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 PMM2O15305 246 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 TLR5O60602 858 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 LILRB5O75023 590 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 EGFP01133 1207 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 CYP17A1P05093 508 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 ACO1P21399 889 aaKnown RBP9.33□□□□□ -0.92
CHD4-204ENST00000535810 SDHBP21912 280 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 FMO5P49326 533 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 GALK1P51570 392 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 STX17P56962 302 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 LRMPQ12912 555 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 CAMK4Q16566 473 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 GAB4Q2WGN9 574 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 CCDC40Q4G0X9 1142 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 SWT1Q5T5J6 900 aaKnown RBP9.33□□□□□ -0.92
CHD4-204ENST00000535810 ARHGAP17Q68EM7 881 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 PKN3Q6P5Z2 889 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 DDX42Q86XP3 938 aaKnown RBP eCLIP9.33□□□□□ -0.92
CHD4-204ENST00000535810 UBR7Q8N806 425 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 TRIML1Q8N9V2 468 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 SUMF1Q8NBK3 374 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 RUBCNQ92622 972 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 EZH1Q92800 747 aaPredicted RBP9.33□□□□□ -0.92
CHD4-204ENST00000535810 TMEM176AQ96HP8 235 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 HEXIM2Q96MH2 286 aaKnown RBP9.33□□□□□ -0.92
CHD4-204ENST00000535810 GBP4Q96PP9 640 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 DUSP16Q9BY84 665 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 CYLDQ9NQC7 956 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 TLR8Q9NR97 1041 aaKnown RBP9.33□□□□□ -0.92
CHD4-204ENST00000535810 OSER1Q9NX31 292 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 SCML2Q9UQR0 700 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 MYH10P35580 1976 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 USP24Q9UPU5 2620 aa9.33□□□□□ -0.92
CHD4-204ENST00000535810 MAP1BP46821 2468 aaKnown RBP9.32□□□□□ -0.92
CHD4-204ENST00000535810 MYO16Q9Y6X6 1858 aa9.32□□□□□ -0.92
CHD4-204ENST00000535810 E2F8A0AVK6 867 aa9.32□□□□□ -0.92
CHD4-204ENST00000535810 SLC9A3R1O14745 358 aaPredicted RBP9.32□□□□□ -0.92
CHD4-204ENST00000535810 RNF40O75150 1001 aa9.32□□□□□ -0.92
CHD4-204ENST00000535810 TBX18O95935 607 aa9.32□□□□□ -0.92
CHD4-204ENST00000535810 CD46P15529 392 aa9.32□□□□□ -0.92
CHD4-204ENST00000535810 PTMSP20962 102 aa9.32□□□□□ -0.92
CHD4-204ENST00000535810 DRD1P21728 446 aa9.32□□□□□ -0.92
CHD4-204ENST00000535810 KIF11P52732 1056 aa9.32□□□□□ -0.92
CHD4-204ENST00000535810 NRLP54845 237 aa9.32□□□□□ -0.92
CHD4-204ENST00000535810 MARSP56192 900 aaKnown RBP9.32□□□□□ -0.92
CHD4-204ENST00000535810 DMWDQ09019 674 aa9.32□□□□□ -0.92
CHD4-204ENST00000535810 TTC30AQ86WT1 665 aa9.32□□□□□ -0.92
CHD4-204ENST00000535810 TRIM59Q8IWR1 403 aa9.32□□□□□ -0.92
CHD4-204ENST00000535810 CD101Q93033 1021 aa9.32□□□□□ -0.92
CHD4-204ENST00000535810 EXOC4Q96A65 974 aa9.32□□□□□ -0.92
CHD4-204ENST00000535810 NACA2Q9H009 215 aa9.32□□□□□ -0.92
CHD4-204ENST00000535810 EPC1Q9H2F5 836 aa9.32□□□□□ -0.92
CHD4-204ENST00000535810 NMUR1Q9HB89 426 aa9.32□□□□□ -0.92
CHD4-204ENST00000535810 USP3Q9Y6I4 520 aa9.32□□□□□ -0.92
CHD4-204ENST00000535810 ASPMQ8IZT6 3477 aa9.32□□□□□ -0.92
CHD4-204ENST00000535810 A0A1W2PQH9 124 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 CHURC1-FNTBB4DL54 471 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 P4HA2O15460 535 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 GREM1O60565 184 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 GNA14O95837 355 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 ADH1CP00326 375 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 TBXAS1P24557 533 aaPredicted RBP9.31□□□□□ -0.92
CHD4-204ENST00000535810 HOXA6P31267 233 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 HOXC13P31276 330 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 OPRD1P41143 372 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 YWHAEP62258 255 aaKnown RBP9.31□□□□□ -0.92
CHD4-204ENST00000535810 LSM11P83369 360 aaKnown RBP eCLIP9.31□□□□□ -0.92
CHD4-204ENST00000535810 NR1H3Q13133 447 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 DHCR24Q15392 516 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 RSPO4Q2I0M5 234 aaPredicted RBP9.31□□□□□ -0.92
CHD4-204ENST00000535810 GOLGA7BQ2TAP0 167 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 FBXO43Q4G163 708 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 KLHDC10Q6PID8 442 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 RHBDF2Q6PJF5 856 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 CCDC186Q7Z3E2 898 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 SCD5Q86SK9 330 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 PIGZQ86VD9 579 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 BBS7Q8IWZ6 715 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 ADGRG2Q8IZP9 1017 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 ANKRD52Q8NB46 1076 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 LMO3Q8TAP4 145 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 KAT5Q92993 513 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 WBP2Q969T9 261 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 PCMTD1Q96MG8 357 aaPredicted RBP9.31□□□□□ -0.92
CHD4-204ENST00000535810 NT5C1BQ96P26 610 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 MED15Q96RN5 788 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 HINFPQ9BQA5 517 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 SRRTQ9BXP5 876 aaKnown RBP9.31□□□□□ -0.92
CHD4-204ENST00000535810 CLSTN2Q9H4D0 955 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms