RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 NXPE3Q969Y0 559 aa16.33■□□□□ 0.2
CTTN-215ENST00000533931 SLC2A13Q96QE2 648 aa16.33■□□□□ 0.2
CTTN-215ENST00000533931 C11orf70Q9BRQ4 267 aa16.33■□□□□ 0.2
CTTN-215ENST00000533931 LUC7LQ9NQ29 371 aaKnown RBP16.33■□□□□ 0.2
CTTN-215ENST00000533931 PRDM6Q9NQX0 595 aa16.33■□□□□ 0.2
CTTN-215ENST00000533931 OBP2AQ9NY56 170 aa16.33■□□□□ 0.2
CTTN-215ENST00000533931 RRN3Q9NYV6 651 aa16.33■□□□□ 0.2
CTTN-215ENST00000533931 TJP2Q9UDY2 1190 aa16.33■□□□□ 0.2
CTTN-215ENST00000533931 CDH22Q9UJ99 828 aa16.33■□□□□ 0.2
CTTN-215ENST00000533931 INTUQ9ULD6 942 aa16.33■□□□□ 0.2
CTTN-215ENST00000533931 EIF3CLB5ME19 914 aaKnown RBP16.32■□□□□ 0.2
CTTN-215ENST00000533931 NRDCO43847 1150 aa16.32■□□□□ 0.2
CTTN-215ENST00000533931 DAB1O75553 588 aa16.32■□□□□ 0.2
CTTN-215ENST00000533931 ATP5C1P36542 298 aaKnown RBP16.32■□□□□ 0.2
CTTN-215ENST00000533931 CYP4F8P98187 520 aa16.32■□□□□ 0.2
CTTN-215ENST00000533931 NNTQ13423 1086 aa16.32■□□□□ 0.2
CTTN-215ENST00000533931 CCDC122Q5T0U0 273 aa16.32■□□□□ 0.2
CTTN-215ENST00000533931 EYSQ5T1H1 3165 aa16.32■□□□□ 0.2
CTTN-215ENST00000533931 MTSS1LQ765P7 747 aa16.32■□□□□ 0.2
CTTN-215ENST00000533931 DDX42Q86XP3 938 aaKnown RBP eCLIP16.32■□□□□ 0.2
CTTN-215ENST00000533931 TMEM139Q8IV31 216 aa16.32■□□□□ 0.2
CTTN-215ENST00000533931 CLEC4CQ8WTT0 213 aa16.32■□□□□ 0.2
CTTN-215ENST00000533931 SMARCD2Q92925 531 aa16.32■□□□□ 0.2
CTTN-215ENST00000533931 ASB16Q96NS5 453 aa16.32■□□□□ 0.2
CTTN-215ENST00000533931 ASB2Q96Q27 587 aa16.32■□□□□ 0.2
CTTN-215ENST00000533931 MYADMQ96S97 322 aa16.32■□□□□ 0.2
CTTN-215ENST00000533931 EIF3CQ99613 913 aaKnown RBP16.32■□□□□ 0.2
CTTN-215ENST00000533931 SLC46A2Q9BY10 475 aa16.32■□□□□ 0.2
CTTN-215ENST00000533931 PARVAQ9NVD7 372 aa16.32■□□□□ 0.2
CTTN-215ENST00000533931 TAS2R14Q9NYV8 317 aa16.32■□□□□ 0.2
CTTN-215ENST00000533931 DNMT3LQ9UJW3 386 aa16.32■□□□□ 0.2
CTTN-215ENST00000533931 ARHGAP26Q9UNA1 814 aa16.32■□□□□ 0.2
CTTN-215ENST00000533931 SCINQ9Y6U3 715 aa16.32■□□□□ 0.2
CTTN-215ENST00000533931 NOTCH4Q99466 2003 aa16.31■□□□□ 0.2
CTTN-215ENST00000533931 TCRBV5S1A1TA0A578 114 aa16.31■□□□□ 0.2
CTTN-215ENST00000533931 ANKRD62A6NC57 917 aa16.31■□□□□ 0.2
CTTN-215ENST00000533931 PIK3R2O00459 728 aa16.31■□□□□ 0.2
CTTN-215ENST00000533931 IPO7O95373 1038 aaKnown RBP16.31■□□□□ 0.2
CTTN-215ENST00000533931 CKMP06732 381 aa16.31■□□□□ 0.2
CTTN-215ENST00000533931 GJA1P17302 382 aa16.31■□□□□ 0.2
CTTN-215ENST00000533931 HDCP19113 662 aa16.31■□□□□ 0.2
CTTN-215ENST00000533931 GBP2P32456 591 aaPredicted RBP16.31■□□□□ 0.2
CTTN-215ENST00000533931 AVPR1AP37288 418 aa16.31■□□□□ 0.2
CTTN-215ENST00000533931 KPNA1P52294 538 aaPredicted RBP16.31■□□□□ 0.2
CTTN-215ENST00000533931 GFPT1Q06210 699 aaPredicted RBP16.31■□□□□ 0.2
CTTN-215ENST00000533931 FAM102AQ5T9C2 384 aaPredicted RBP16.31■□□□□ 0.2
CTTN-215ENST00000533931 TXNDC8Q6A555 127 aa16.31■□□□□ 0.2
CTTN-215ENST00000533931 PLEKHA7Q6IQ23 1121 aa16.31■□□□□ 0.2
CTTN-215ENST00000533931 ADHFE1Q8IWW8 467 aa16.31■□□□□ 0.2
CTTN-215ENST00000533931 RNF139Q8WU17 664 aa16.31■□□□□ 0.2
CTTN-215ENST00000533931 KHSRPQ92945 711 aaKnown RBP eCLIP16.31■□□□□ 0.2
CTTN-215ENST00000533931 FAM149B1Q96BN6 582 aa16.31■□□□□ 0.2
CTTN-215ENST00000533931 SMOC2Q9H3U7 446 aa16.31■□□□□ 0.2
CTTN-215ENST00000533931 SLITRK6Q9H5Y7 841 aa16.31■□□□□ 0.2
CTTN-215ENST00000533931 MRPL47Q9HD33 250 aaKnown RBP16.31■□□□□ 0.2
CTTN-215ENST00000533931 OSER1Q9NX31 292 aa16.31■□□□□ 0.2
CTTN-215ENST00000533931 TMEM59LQ9UK28 342 aa16.31■□□□□ 0.2
CTTN-215ENST00000533931 XIRP2A4UGR9 3374 aa16.31■□□□□ 0.2
CTTN-215ENST00000533931 C2orf78A6NCI8 922 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 SIGLEC16A6NMB1 481 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 LOC730098B7Z3J9 87 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 NRG2O14511 850 aaPredicted RBP16.3■□□□□ 0.2
CTTN-215ENST00000533931 CAPN9O14815 690 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 COCHO43405 550 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 NDUFA10O95299 355 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 ABL1P00519 1130 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 FYNP06241 537 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 H2AFZP0C0S5 128 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 KRT3P12035 628 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 RRM1P23921 792 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 NOS2P35228 1153 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 MATKP42679 507 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 PGFP49763 221 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 CCDC173Q0VFZ6 552 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 SPA17Q15506 151 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 PPP1R15BQ5SWA1 713 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 DNAJC24Q6P3W2 148 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 H2AFVQ71UI9 128 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 RSRC2Q7L4I2 434 aaKnown RBP16.3■□□□□ 0.2
CTTN-215ENST00000533931 LRRC8AQ8IWT6 810 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 MAB21L3Q8N8X9 362 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 ZSCAN18Q8TBC5 510 aaPredicted RBP16.3■□□□□ 0.2
CTTN-215ENST00000533931 ING5Q8WYH8 240 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 PIWIL1Q96J94 861 aaKnown RBP16.3■□□□□ 0.2
CTTN-215ENST00000533931 NACA2Q9H009 215 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 CCSER2Q9H7U1 834 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 TRPC7Q9HCX4 862 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 LCMT1Q9UIC8 334 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 STAP1Q9ULZ2 295 aa16.3■□□□□ 0.2
CTTN-215ENST00000533931 HBS1LQ9Y450 684 aaKnown RBP16.3■□□□□ 0.2
CTTN-215ENST00000533931 EPN1Q9Y6I3 576 aaPredicted RBP16.3■□□□□ 0.2
CTTN-215ENST00000533931 MYH10P35580 1976 aa16.29■□□□□ 0.2
CTTN-215ENST00000533931 TMCO5BA8MYB1 307 aa16.29■□□□□ 0.2
CTTN-215ENST00000533931 ANHXE9PGG2 379 aa16.29■□□□□ 0.2
CTTN-215ENST00000533931 ARHGAP6O43182 974 aa16.29■□□□□ 0.2
CTTN-215ENST00000533931 ECI2O75521 394 aa16.29■□□□□ 0.2
CTTN-215ENST00000533931 CYP1A2P05177 515 aa16.29■□□□□ 0.2
CTTN-215ENST00000533931 TMEM253P0C7T8 217 aa16.29■□□□□ 0.2
CTTN-215ENST00000533931 BMP1P13497 986 aa16.29■□□□□ 0.2
CTTN-215ENST00000533931 NCAM1P13591 858 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms