RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 TXNDC5Q8NBS9 432 aaKnown RBP18.38■□□□□ 0.53
VPS51-213ENST00000533827 SPATA20Q8TB22 786 aa18.38■□□□□ 0.53
VPS51-213ENST00000533827 JAKMIP2Q96AA8 810 aa18.38■□□□□ 0.53
VPS51-213ENST00000533827 CNOT6LQ96LI5 555 aaKnown RBP18.38■□□□□ 0.53
VPS51-213ENST00000533827 GSDMAQ96QA5 445 aa18.38■□□□□ 0.53
VPS51-213ENST00000533827 DUSP16Q9BY84 665 aa18.38■□□□□ 0.53
VPS51-213ENST00000533827 USP3Q9Y6I4 520 aa18.38■□□□□ 0.53
VPS51-213ENST00000533827 A0A1W2PQH9 124 aa18.37■□□□□ 0.53
VPS51-213ENST00000533827 STX10O60499 249 aa18.37■□□□□ 0.53
VPS51-213ENST00000533827 TULP3O75386 442 aa18.37■□□□□ 0.53
VPS51-213ENST00000533827 RHOBTB1O94844 696 aa18.37■□□□□ 0.53
VPS51-213ENST00000533827 EPB41P11171 864 aaKnown RBP18.37■□□□□ 0.53
VPS51-213ENST00000533827 TIE1P35590 1138 aa18.37■□□□□ 0.53
VPS51-213ENST00000533827 ELF2Q15723 593 aa18.37■□□□□ 0.53
VPS51-213ENST00000533827 ZNF394Q53GI3 561 aa18.37■□□□□ 0.53
VPS51-213ENST00000533827 BTBD8Q5XKL5 378 aa18.37■□□□□ 0.53
VPS51-213ENST00000533827 ANO7Q6IWH7 933 aa18.37■□□□□ 0.53
VPS51-213ENST00000533827 KLHDC10Q6PID8 442 aa18.37■□□□□ 0.53
VPS51-213ENST00000533827 CCDC186Q7Z3E2 898 aa18.37■□□□□ 0.53
VPS51-213ENST00000533827 ZNF276Q8N554 614 aa18.37■□□□□ 0.53
VPS51-213ENST00000533827 TTC39CQ8N584 583 aa18.37■□□□□ 0.53
VPS51-213ENST00000533827 NAT16Q8N8M0 369 aa18.37■□□□□ 0.53
VPS51-213ENST00000533827 MDGA1Q8NFP4 955 aa18.37■□□□□ 0.53
VPS51-213ENST00000533827 TPSD1Q9BZJ3 242 aa18.37■□□□□ 0.53
VPS51-213ENST00000533827 DNAI2Q9GZS0 605 aa18.37■□□□□ 0.53
VPS51-213ENST00000533827 CISHQ9NSE2 258 aa18.37■□□□□ 0.53
VPS51-213ENST00000533827 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.37■□□□□ 0.53
VPS51-213ENST00000533827 SGK1O00141 431 aa18.36■□□□□ 0.53
VPS51-213ENST00000533827 KLF8O95600 359 aaPredicted RBP18.36■□□□□ 0.53
VPS51-213ENST00000533827 RARGP13631 454 aa18.36■□□□□ 0.53
VPS51-213ENST00000533827 MPLP40238 635 aa18.36■□□□□ 0.53
VPS51-213ENST00000533827 LIMK1P53667 647 aa18.36■□□□□ 0.53
VPS51-213ENST00000533827 NUCB2P80303 420 aa18.36■□□□□ 0.53
VPS51-213ENST00000533827 AASDHQ4L235 1098 aaPredicted RBP18.36■□□□□ 0.53
VPS51-213ENST00000533827 USP39Q53GS9 565 aaKnown RBP18.36■□□□□ 0.53
VPS51-213ENST00000533827 ANKRD40Q6AI12 368 aa18.36■□□□□ 0.53
VPS51-213ENST00000533827 SCD5Q86SK9 330 aa18.36■□□□□ 0.53
VPS51-213ENST00000533827 C12orf50Q8NA57 414 aaPredicted RBP18.36■□□□□ 0.53
VPS51-213ENST00000533827 SLC4A11Q8NBS3 891 aa18.36■□□□□ 0.53
VPS51-213ENST00000533827 TATDN2Q93075 761 aa18.36■□□□□ 0.53
VPS51-213ENST00000533827 TMEM176AQ96HP8 235 aa18.36■□□□□ 0.53
VPS51-213ENST00000533827 HEXIM2Q96MH2 286 aaKnown RBP18.36■□□□□ 0.53
VPS51-213ENST00000533827 ARID3AQ99856 593 aa18.36■□□□□ 0.53
VPS51-213ENST00000533827 FAM124BQ9H5Z6 455 aaPredicted RBP18.36■□□□□ 0.53
VPS51-213ENST00000533827 RXFP3Q9NSD7 469 aa18.36■□□□□ 0.53
VPS51-213ENST00000533827 DEC1Q9P2X7 70 aa18.36■□□□□ 0.53
VPS51-213ENST00000533827 INVSQ9Y283 1065 aa18.36■□□□□ 0.53
VPS51-213ENST00000533827 COQ4Q9Y3A0 265 aa18.36■□□□□ 0.53
VPS51-213ENST00000533827 GOLGA6L4A6NEF3 574 aa18.35■□□□□ 0.53
VPS51-213ENST00000533827 SLC16A3O15427 465 aaKnown RBP18.35■□□□□ 0.53
VPS51-213ENST00000533827 ADAM23O75077 832 aa18.35■□□□□ 0.53
VPS51-213ENST00000533827 PSEN1P49768 467 aa18.35■□□□□ 0.53
VPS51-213ENST00000533827 PMS1P54277 932 aaKnown RBP18.35■□□□□ 0.53
VPS51-213ENST00000533827 RAD23BP54727 409 aa18.35■□□□□ 0.53
VPS51-213ENST00000533827 FKBP3Q00688 224 aaKnown RBP18.35■□□□□ 0.53
VPS51-213ENST00000533827 BECN1Q14457 450 aa18.35■□□□□ 0.53
VPS51-213ENST00000533827 ANO4Q32M45 955 aa18.35■□□□□ 0.53
VPS51-213ENST00000533827 PREPLQ4J6C6 727 aaPredicted RBP18.35■□□□□ 0.53
VPS51-213ENST00000533827 CBWD6Q4V339 395 aa18.35■□□□□ 0.53
VPS51-213ENST00000533827 CBWD3Q5JTY5 395 aa18.35■□□□□ 0.53
VPS51-213ENST00000533827 EOGTQ5NDL2 527 aa18.35■□□□□ 0.53
VPS51-213ENST00000533827 CBWD5Q5RIA9 395 aa18.35■□□□□ 0.53
VPS51-213ENST00000533827 C11orf74Q86VG3 221 aa18.35■□□□□ 0.53
VPS51-213ENST00000533827 TERB1Q8NA31 727 aa18.35■□□□□ 0.53
VPS51-213ENST00000533827 OLIG1Q8TAK6 271 aa18.35■□□□□ 0.53
VPS51-213ENST00000533827 KCNV2Q8TDN2 545 aa18.35■□□□□ 0.53
VPS51-213ENST00000533827 ERCC4Q92889 916 aaPredicted RBP18.35■□□□□ 0.53
VPS51-213ENST00000533827 TIGD1Q96MW7 591 aa18.35■□□□□ 0.53
VPS51-213ENST00000533827 TSG101Q99816 390 aa18.35■□□□□ 0.53
VPS51-213ENST00000533827 UBXN6Q9BZV1 441 aa18.35■□□□□ 0.53
VPS51-213ENST00000533827 SMOC1Q9H4F8 434 aa18.35■□□□□ 0.53
VPS51-213ENST00000533827 ZDHHC4Q9NPG8 344 aa18.35■□□□□ 0.53
VPS51-213ENST00000533827 VPS45Q9NRW7 570 aa18.35■□□□□ 0.53
VPS51-213ENST00000533827 DNMT3LQ9UJW3 386 aa18.35■□□□□ 0.53
VPS51-213ENST00000533827 LSM7Q9UK45 103 aaKnown RBP18.35■□□□□ 0.53
VPS51-213ENST00000533827 NUDT5Q9UKK9 219 aa18.35■□□□□ 0.53
VPS51-213ENST00000533827 LAMA1P25391 3075 aa18.34■□□□□ 0.53
VPS51-213ENST00000533827 TBC1D3BA6NDS4 549 aa18.34■□□□□ 0.53
VPS51-213ENST00000533827 MDM4O15151 490 aa18.34■□□□□ 0.53
VPS51-213ENST00000533827 TRIM24O15164 1050 aa18.34■□□□□ 0.53
VPS51-213ENST00000533827 ALDH1A2O94788 518 aa18.34■□□□□ 0.53
VPS51-213ENST00000533827 SMC2O95347 1197 aa18.34■□□□□ 0.53
VPS51-213ENST00000533827 GBP1P32455 592 aa18.34■□□□□ 0.53
VPS51-213ENST00000533827 PLA2G4AP47712 749 aa18.34■□□□□ 0.53
VPS51-213ENST00000533827 GOLGA8FQ08AF8 430 aa18.34■□□□□ 0.53
VPS51-213ENST00000533827 GOLGA8DPQ0D2H9 430 aa18.34■□□□□ 0.53
VPS51-213ENST00000533827 PMS2CLQ68D20 193 aa18.34■□□□□ 0.53
VPS51-213ENST00000533827 ARHGAP17Q68EM7 881 aa18.34■□□□□ 0.53
VPS51-213ENST00000533827 POLMQ9NP87 494 aaPredicted RBP18.34■□□□□ 0.53
VPS51-213ENST00000533827 CLIC5Q9NZA1 410 aa18.34■□□□□ 0.53
VPS51-213ENST00000533827 MARK1Q9P0L2 795 aa18.34■□□□□ 0.53
VPS51-213ENST00000533827 NAGPAQ9UK23 515 aa18.34■□□□□ 0.53
VPS51-213ENST00000533827 HCN2Q9UL51 889 aa18.34■□□□□ 0.53
VPS51-213ENST00000533827 STARD13Q9Y3M8 1113 aa18.34■□□□□ 0.53
VPS51-213ENST00000533827 BCLAF3A2AJT9 711 aaKnown RBP18.33■□□□□ 0.52
VPS51-213ENST00000533827 TRIM49BA6NDI0 452 aa18.33■□□□□ 0.52
VPS51-213ENST00000533827 TM4SF5O14894 197 aa18.33■□□□□ 0.52
VPS51-213ENST00000533827 CACNG3O60359 315 aa18.33■□□□□ 0.52
VPS51-213ENST00000533827 BCKDHBP21953 392 aa18.33■□□□□ 0.52
VPS51-213ENST00000533827 CREB5Q02930 508 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms