RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 PSEN1P49768 467 aa13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 MXI1P50539 228 aa13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 FKBP3Q00688 224 aaKnown RBP13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 ANO4Q32M45 955 aa13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 AASDHQ4L235 1098 aaPredicted RBP13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 EOGTQ5NDL2 527 aa13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 ZNF658Q5TYW1 1059 aaPredicted RBP13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 KLHDC10Q6PID8 442 aa13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 TMEM25Q86YD3 366 aa13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 BBS7Q8IWZ6 715 aa13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 TXNDC5Q8NBS9 432 aaKnown RBP13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 WHAMMQ8TF30 809 aa13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 DDX1Q92499 740 aaKnown RBP13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 JAKMIP2Q96AA8 810 aa13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 EEF2KMTQ96G04 330 aa13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 KLF16Q9BXK1 252 aaPredicted RBP13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 DUSP15Q9H1R2 295 aaPredicted RBP13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 CYLDQ9NQC7 956 aa13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 VPS45Q9NRW7 570 aa13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 DNMT3LQ9UJW3 386 aa13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 LSM7Q9UK45 103 aaKnown RBP13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 MYO18AQ92614 2054 aaKnown RBP13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 HHLA1C9JL84 531 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 DCLK1O15075 740 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 CYP26A1O43174 497 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 GDF9O60383 454 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 KLF8O95600 359 aaPredicted RBP13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 RALAP11233 206 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 RARGP13631 454 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 GBP1P32455 592 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 TIE1P35590 1138 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 PLA2G4AP47712 749 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 PGFP49763 221 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 KIF11P52732 1056 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 SLC8A3P57103 927 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 ZNF394Q53GI3 561 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 COBLL1Q53SF7 1204 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 PLA2G2CQ5R387 149 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 PPP1R26Q5T8A7 1209 aaPredicted RBP13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 TCERG1LQ5VWI1 586 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 IL31Q6EBC2 164 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 ANO7Q6IWH7 933 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 GPRIN1Q7Z2K8 1008 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 TRMT11Q7Z4G4 463 aaKnown RBP13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 RASSF3Q86WH2 238 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 C12orf40Q86WS4 652 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 TTC30AQ86WT1 665 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 ABCA7Q8IZY2 2146 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 ZNF276Q8N554 614 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 ALLCQ8N6M5 410 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 NAT16Q8N8M0 369 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 IL17RCQ8NAC3 791 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 SEMA4DQ92854 862 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 SMARCE1Q969G3 411 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 TMEM176AQ96HP8 235 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 CNOT6LQ96LI5 555 aaKnown RBP13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 XPO6Q96QU8 1125 aaKnown RBP13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 CDK5RAP1Q96SZ6 601 aaKnown RBP13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 UBXN6Q9BZV1 441 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 POLMQ9NP87 494 aaPredicted RBP13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 CISHQ9NSE2 258 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 WDR35Q9P2L0 1181 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 ACACBO00763 2458 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 GON4LQ3T8J9 2241 aa13.08□□□□□ -0.32
CAPRIN1-213ENST00000533562 A0A1W2PQH9 124 aa13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 SLC16A3O15427 465 aaKnown RBP13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 TULP3O75386 442 aa13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 MPLP40238 635 aa13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 KIR2DL1P43626 348 aaPredicted RBP13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 LIMK1P53667 647 aa13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 KDSRQ06136 332 aa13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 MESP2Q0VG99 397 aa13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 STIM1Q13586 685 aa13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 BYSLQ13895 437 aaKnown RBP13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 SF3A2Q15428 464 aaKnown RBP13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 CCDC6Q16204 474 aa13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 C10orf120Q5SQS8 335 aa13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 EMC10Q5UCC4 262 aa13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 ANKRD40Q6AI12 368 aa13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 CCDC186Q7Z3E2 898 aa13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 ETFBKMTQ8IXQ9 262 aa13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 ENGASEQ8NFI3 743 aa13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 TIGD1Q96MW7 591 aa13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 TPSD1Q9BZJ3 242 aa13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 OSER1Q9NX31 292 aa13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 CLIC5Q9NZA1 410 aa13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 NAGPAQ9UK23 515 aa13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 ZNF510Q9Y2H8 683 aa13.07□□□□□ -0.32
CAPRIN1-213ENST00000533562 EPG5Q9HCE0 2579 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 SGK1O00141 431 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 GREM1O60565 184 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 CAVIN2O95810 425 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 RAD23BP54727 409 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 COG7P83436 770 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 CREB5Q02930 508 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 LRRC63Q05C16 580 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 DCAF17Q5H9S7 520 aaPredicted RBP13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 TMEM92Q6UXU6 159 aa13.06□□□□□ -0.32
CAPRIN1-213ENST00000533562 SFTPA1Q8IWL2 248 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms