RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 DHX8Q14562 1220 aaKnown RBP8.29□□□□□ -1.08
NXF1-215ENST00000533440 MCM6Q14566 821 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 SUZ12Q15022 739 aaKnown RBP8.29□□□□□ -1.08
NXF1-215ENST00000533440 ANO4Q32M45 955 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 DCAF12L1Q5VU92 463 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 ARL6IP4Q66PJ3 421 aaKnown RBP8.29□□□□□ -1.08
NXF1-215ENST00000533440 KIAA1324Q6UXG2 1013 aaKnown RBP8.29□□□□□ -1.08
NXF1-215ENST00000533440 PDZD8Q8NEN9 1154 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 WBP2Q969T9 261 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 ERLEC1Q96DZ1 483 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 AK8Q96MA6 479 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 DCBLD2Q96PD2 775 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 FAM213AQ9BRX8 229 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 GPR174Q9BXC1 333 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 MTMR12Q9C0I1 747 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 ZHX3Q9H4I2 956 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 DNAJC17Q9NVM6 304 aaKnown RBP8.29□□□□□ -1.08
NXF1-215ENST00000533440 RBAKQ9NYW8 714 aaPredicted RBP8.29□□□□□ -1.08
NXF1-215ENST00000533440 MARK1Q9P0L2 795 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 SH3BP1Q9Y3L3 701 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 NME7Q9Y5B8 376 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 ATMQ13315 3056 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 MGAQ8IWI9 3026 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 GOLGA8CPA6NN73 597 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 METTL12A8MUP2 240 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 KCNJ18B7U540 433 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 WASH3PC4AMC7 463 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 PLK4O00444 970 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 TLX3O43711 291 aaPredicted RBP8.28□□□□□ -1.08
NXF1-215ENST00000533440 GREM1O60565 184 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 IGLV3-19P01714 112 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 KRT18P05783 430 aaKnown RBP8.28□□□□□ -1.08
NXF1-215ENST00000533440 PDGFRBP09619 1106 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 CISD3P0C7P0 127 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 ZDHHC11BP0C7U3 371 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 HLA-EP13747 358 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 GARTP22102 1010 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 YWHAQP27348 245 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 TUBP50607 506 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 ZNF132P52740 706 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 KCNA1Q09470 495 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 MYO1EQ12965 1108 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 RILPL1Q5EBL4 403 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 MDH1BQ5I0G3 518 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 HECTD3Q5T447 861 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 LARP1BQ659C4 914 aaKnown RBP8.28□□□□□ -1.08
NXF1-215ENST00000533440 HTR3DQ70Z44 454 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 TMPRSS12Q86WS5 348 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 NUP93Q8N1F7 819 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 FAM184AQ8NB25 1140 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 SCFD1Q8WVM8 642 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 RAD54LQ92698 747 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 SAAL1Q96ER3 474 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 CALML4Q96GE6 196 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 HPDLQ96IR7 371 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 XPO6Q96QU8 1125 aaKnown RBP8.28□□□□□ -1.08
NXF1-215ENST00000533440 MKRN2Q9H000 416 aaKnown RBP8.28□□□□□ -1.08
NXF1-215ENST00000533440 MIR1-1HGQ9H1L0 117 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 CCSER2Q9H7U1 834 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 PDE11AQ9HCR9 933 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 IL37Q9NZH6 218 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.28□□□□□ -1.08
NXF1-215ENST00000533440 LIMCH1Q9UPQ0 1083 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 PCDHB13Q9Y5F0 798 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 MYO18BQ8IUG5 2567 aa8.28□□□□□ -1.08
NXF1-215ENST00000533440 MUC22E2RYF6 1773 aaPredicted RBP8.27□□□□□ -1.08
NXF1-215ENST00000533440 A0A1B0GVT2 93 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 FAM92AA1XBS5 289 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 NEDD8-MDP1E9PL57 170 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 J3QKU1 62 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 PAPSS1O43252 624 aaPredicted RBP8.27□□□□□ -1.09
NXF1-215ENST00000533440 PCDHGA12O60330 932 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 TACC1O75410 805 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 RTN3O95197 1032 aaPredicted RBP8.27□□□□□ -1.09
NXF1-215ENST00000533440 FAM163BP0C2L3 166 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 TMEM191BP0C7N4 346 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 TYRP14679 529 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 PTPN1P18031 435 aaKnown RBP8.27□□□□□ -1.09
NXF1-215ENST00000533440 OXTRP30559 389 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 UBA7P41226 1012 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 GRK6P43250 576 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 TPMTP51580 245 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 IFRD2Q12894 506 aaPredicted RBP8.27□□□□□ -1.09
NXF1-215ENST00000533440 ENPP2Q13822 863 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 FUT11Q495W5 492 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 L1TD1Q5T7N2 865 aaKnown RBP8.27□□□□□ -1.09
NXF1-215ENST00000533440 PCSK4Q6UW60 755 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 DHRS13Q6UX07 377 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 SFR1Q86XK3 245 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 OR5B17Q8NGF7 314 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 LARP4BQ92615 738 aaKnown RBP8.27□□□□□ -1.09
NXF1-215ENST00000533440 FBXO32Q969P5 355 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 NXPE2Q96DL1 559 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 ANKRD36BP1Q96IX9 119 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 FCRL3Q96P31 734 aaPredicted RBP8.27□□□□□ -1.09
NXF1-215ENST00000533440 BBS2Q9BXC9 721 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 TRIM9Q9C026 710 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 ZNF518BQ9C0D4 1074 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 ELOVL4Q9GZR5 314 aa8.27□□□□□ -1.09
NXF1-215ENST00000533440 OSGEPQ9NPF4 335 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms