RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 MGRN1O60291 552 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 ZNF189O75820 626 aaPredicted RBP6.04□□□□□ -1.44
CD44-231ENST00000531110 NCR1O76036 304 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 RPN1P04843 607 aaKnown RBP6.04□□□□□ -1.44
CD44-231ENST00000531110 CPA3P15088 417 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 ACVRL1P37023 503 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 MATR3P43243 847 aaKnown RBP eCLIP6.04□□□□□ -1.44
CD44-231ENST00000531110 RANBP1P43487 201 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 POU6F2P78424 691 aaPredicted RBP6.04□□□□□ -1.44
CD44-231ENST00000531110 FAM189BP81408 668 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 TAP1Q03518 808 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 SULT2A1Q06520 285 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 TCF15Q12870 199 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 ZNF267Q14586 743 aaPredicted RBP6.04□□□□□ -1.44
CD44-231ENST00000531110 KIF22Q14807 665 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 NONOQ15233 471 aaKnown RBP eCLIP6.04□□□□□ -1.44
CD44-231ENST00000531110 RASA2Q15283 850 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 TIGD2Q4W5G0 525 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 LY6G5CQ5SRR4 150 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 SPATA1Q5VX52 437 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 B4GALNT4Q76KP1 1039 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 NLRP9Q7RTR0 991 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 MAATS1Q7Z4T9 603 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 LUZP1Q86V48 1076 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 Q8N1X5 172 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 CLASRPQ8N2M8 674 aaKnown RBP6.04□□□□□ -1.44
CD44-231ENST00000531110 TMEM132CQ8N3T6 1108 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 ESX1Q8N693 406 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 CFAP61Q8NHU2 1237 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 TBC1D15Q8TC07 691 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 P3H4Q92791 437 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 DDX17Q92841 729 aaKnown RBP6.04□□□□□ -1.44
CD44-231ENST00000531110 CGRRF1Q99675 332 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 LRRC27Q9C0I9 530 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 CENPHQ9H3R5 247 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 ZNF768Q9H5H4 540 aaKnown RBP6.04□□□□□ -1.44
CD44-231ENST00000531110 CLK4Q9HAZ1 481 aaKnown RBP6.04□□□□□ -1.44
CD44-231ENST00000531110 ANLNQ9NQW6 1124 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 PNPOQ9NVS9 261 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 RNF181Q9P0P0 153 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 GABBR1Q9UBS5 961 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 PGAP2Q9UHJ9 254 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 HERC5Q9UII4 1024 aaKnown RBP6.04□□□□□ -1.44
CD44-231ENST00000531110 ASAP1Q9ULH1 1129 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 PCDHGB3Q9Y5G1 929 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 PCDHA3Q9Y5H8 950 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 UACAQ9BZF9 1416 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 LRRC14BA6NHZ5 514 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 NPIPB8E9PQR5 432 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 BOLA2-SMG1P6H3BVE0 249 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 CYR61O00622 381 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 MAP2K7O14733 419 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 SHOX2O60902 331 aaPredicted RBP6.03□□□□□ -1.44
CD44-231ENST00000531110 STAMBPO95630 424 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 ABHD16AO95870 558 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 ALDH2P05091 517 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 LDHCP07864 332 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 VIMP08670 466 aaKnown RBP6.03□□□□□ -1.44
CD44-231ENST00000531110 FGFR4P22455 802 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 DDX6P26196 483 aaKnown RBP eCLIP6.03□□□□□ -1.44
CD44-231ENST00000531110 LIFRP42702 1097 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 AGFG1P52594 562 aaKnown RBP6.03□□□□□ -1.44
CD44-231ENST00000531110 INHBCP55103 352 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 NOMO3P69849 1222 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 PIGFQ07326 219 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 TRAP1Q12931 704 aaKnown RBP6.03□□□□□ -1.44
CD44-231ENST00000531110 MLC1Q15049 377 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 LRRC41Q15345 812 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 TAF11Q15544 211 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 ALDH1L2Q3SY69 923 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 SPDYE7PQ495Y7 208 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 NOMO2Q5JPE7 1267 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 NDUFAF5Q5TEU4 345 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 FCRLBQ6BAA4 426 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 NEPROQ6NW34 567 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 FOXR2Q6PJQ5 311 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 OLFML1Q6UWY5 402 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 NEK10Q6ZWH5 1172 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 RUFY3Q7L099 469 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 CCDC146Q8IYE0 955 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 RNF10Q8N5U6 811 aaKnown RBP6.03□□□□□ -1.44
CD44-231ENST00000531110 BRSK1Q8TDC3 778 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 SDCCAG3Q96C92 435 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 ZNF653Q96CK0 615 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 CFAP36Q96G28 342 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 PHACTR3Q96KR7 559 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 CTAGE1Q96RT6 745 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 RPS6KC1Q96S38 1066 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 PRRX2Q99811 253 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 CCDC28BQ9BUN5 200 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 PARD6BQ9BYG5 372 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 TRIM5Q9C035 493 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 ALDH8A1Q9H2A2 487 aaPredicted RBP6.03□□□□□ -1.44
CD44-231ENST00000531110 TMEM60Q9H2L4 133 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 TNMDQ9H2S6 317 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 DCTPP1Q9H773 170 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 BRD9Q9H8M2 597 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 FKBP14Q9NWM8 211 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 NDUFA13Q9P0J0 144 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 TTC7AQ9ULT0 858 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms