RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 LRRTM3Q86VH5 581 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 RCOR2Q8IZ40 523 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 NUP93Q8N1F7 819 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 RUBCNQ92622 972 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 CENPIQ92674 756 aaPredicted RBP10.32□□□□□ -0.76
CTNND1-228ENST00000531007 MRGPRX2Q96LB1 330 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 RUNDC3BQ96NL0 473 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 DDX23Q9BUQ8 820 aaKnown RBP10.32□□□□□ -0.76
CTNND1-228ENST00000531007 PRDM16Q9HAZ2 1276 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 POPDC2Q9HBU9 364 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 MRPL17Q9NRX2 175 aaKnown RBP10.32□□□□□ -0.76
CTNND1-228ENST00000531007 CHORDC1Q9UHD1 332 aaPredicted RBP10.32□□□□□ -0.76
CTNND1-228ENST00000531007 EFR3BQ9Y2G0 817 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 ALPK3Q96L96 1907 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 TNRC18O15417 2968 aaPredicted RBP10.32□□□□□ -0.76
CTNND1-228ENST00000531007 ZNF487B1APH4 448 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 NT5C1B-RDH14C9J2C7 533 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 TULP2O00295 520 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 CTIFO43310 598 aaKnown RBP10.31□□□□□ -0.76
CTNND1-228ENST00000531007 CEP104O60308 925 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 LILRB3O75022 631 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 LRCH4O75427 683 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 BEST1O76090 585 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 ENDOD1O94919 500 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 F9P00740 461 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 HAPLN1P10915 354 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-228ENST00000531007 LCP1P13796 627 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 ZNF135P52742 658 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-228ENST00000531007 DAOAP59103 153 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 SKOR1P84550 965 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 ADCY1Q08828 1119 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 MTA1Q13330 715 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 GLE1Q53GS7 698 aaKnown RBP10.31□□□□□ -0.76
CTNND1-228ENST00000531007 TMEM173Q86WV6 379 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-228ENST00000531007 MAP7D3Q8IWC1 876 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 ZMIZ2Q8NF64 920 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 SNIP1Q8TAD8 396 aaKnown RBP10.31□□□□□ -0.76
CTNND1-228ENST00000531007 ZNF461Q8TAF7 563 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 TEKT4Q8WW24 435 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 RXFP2Q8WXD0 754 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 RIN2Q8WYP3 895 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-228ENST00000531007 UBXN4Q92575 508 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 NT5C3BQ969T7 300 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 PGAP3Q96FM1 320 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-228ENST00000531007 BTBD6Q96KE9 485 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 RNPC3Q96LT9 517 aaKnown RBP10.31□□□□□ -0.76
CTNND1-228ENST00000531007 SLC2A13Q96QE2 648 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 LPIN3Q9BQK8 851 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 CARD6Q9BX69 1037 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 RXFP1Q9HBX9 757 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 TMLHEQ9NVH6 421 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 IL37Q9NZH6 218 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 AFF4Q9UHB7 1163 aaKnown RBP10.31□□□□□ -0.76
CTNND1-228ENST00000531007 MTUS1Q9ULD2 1270 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 IRAK3Q9Y616 596 aa10.31□□□□□ -0.76
CTNND1-228ENST00000531007 FAM92AA1XBS5 289 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 MTMR11A4FU01 709 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 C5orf67F2Z3F1 127 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 F8VP50 259 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 TNFRSF10BO14763 440 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 CAPN9O14815 690 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 MDM4O15151 490 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 PRPSAP2O60256 369 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 TADA3O75528 432 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 FGF18O76093 207 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 ABLIM3O94929 683 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 CTSAP10619 480 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 MCM3P25205 808 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 NDUFV1P49821 464 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 ZNF252P-AS1Q0IIN9 211 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 PLD1Q13393 1074 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 RAB33AQ14088 237 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 PDK2Q15119 407 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 QPCTQ16769 361 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 ACBD5Q5T8D3 534 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-228ENST00000531007 PDE12Q6L8Q7 609 aaKnown RBP10.3□□□□□ -0.76
CTNND1-228ENST00000531007 FAM117BQ6P1L5 589 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 DENND5BQ6ZUT9 1274 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 PHLDB2Q86SQ0 1253 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 MON1AQ86VX9 555 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 ZNF276Q8N554 614 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 SPATA4Q8NEY3 305 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 JOSD2Q8TAC2 188 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 COG1Q8WTW3 980 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 BCL7CQ8WUZ0 217 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-228ENST00000531007 OVCA2Q8WZ82 227 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 CDK5RAP1Q96SZ6 601 aaKnown RBP10.3□□□□□ -0.76
CTNND1-228ENST00000531007 KCNK16Q96T55 309 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 C11orf84Q9BUA3 381 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-228ENST00000531007 FRMD8P1Q9BZ68 369 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-228ENST00000531007 ULBP1Q9BZM6 244 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 TRIM7Q9C029 511 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 GOLPH3Q9H4A6 298 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 ABCC13Q9NSE7 274 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 ABI2Q9NYB9 513 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-228ENST00000531007 TJP2Q9UDY2 1190 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 USP18Q9UMW8 372 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 PACSIN2Q9UNF0 486 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-228ENST00000531007 SCML2Q9UQR0 700 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 CDY1Q9Y6F8 540 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms