RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 TCF4P15884 667 aa25.86■■□□□ 1.73
LDLRAD3-203ENST00000528989 MATKP42679 507 aa25.86■■□□□ 1.73
LDLRAD3-203ENST00000528989 SLFN11Q7Z7L1 901 aa25.86■■□□□ 1.73
LDLRAD3-203ENST00000528989 HS6ST3Q8IZP7 471 aa25.86■■□□□ 1.73
LDLRAD3-203ENST00000528989 ADAM32Q8TC27 787 aa25.86■■□□□ 1.73
LDLRAD3-203ENST00000528989 ALS2CR12Q96Q35 445 aa25.86■■□□□ 1.73
LDLRAD3-203ENST00000528989 DDX23Q9BUQ8 820 aaKnown RBP25.86■■□□□ 1.73
LDLRAD3-203ENST00000528989 ASNSD1Q9NWL6 643 aa25.86■■□□□ 1.73
LDLRAD3-203ENST00000528989 GREB1Q4ZG55 1949 aa25.86■■□□□ 1.73
LDLRAD3-203ENST00000528989 CAPN9O14815 690 aa25.85■■□□□ 1.73
LDLRAD3-203ENST00000528989 PROSCO94903 275 aa25.85■■□□□ 1.73
LDLRAD3-203ENST00000528989 KCNC3Q14003 757 aa25.85■■□□□ 1.73
LDLRAD3-203ENST00000528989 ARCQ7LC44 396 aa25.85■■□□□ 1.73
LDLRAD3-203ENST00000528989 C12orf76Q8N812 135 aaPredicted RBP25.85■■□□□ 1.73
LDLRAD3-203ENST00000528989 FNIP1Q8TF40 1166 aa25.85■■□□□ 1.73
LDLRAD3-203ENST00000528989 ZNF512Q96ME7 567 aaPredicted RBP25.85■■□□□ 1.73
LDLRAD3-203ENST00000528989 HCFC1R1Q9NWW0 138 aa25.85■■□□□ 1.73
LDLRAD3-203ENST00000528989 DNAI1Q9UI46 699 aa25.85■■□□□ 1.73
LDLRAD3-203ENST00000528989 SPTBN5Q9NRC6 3674 aaKnown RBP25.85■■□□□ 1.73
LDLRAD3-203ENST00000528989 C5orf42Q9H799 3197 aa25.85■■□□□ 1.73
LDLRAD3-203ENST00000528989 NCK2O43639 380 aa25.85■■□□□ 1.73
LDLRAD3-203ENST00000528989 DAB1O75553 588 aa25.85■■□□□ 1.73
LDLRAD3-203ENST00000528989 ATXN1P54253 815 aaKnown RBP25.85■■□□□ 1.73
LDLRAD3-203ENST00000528989 HYAL1Q12794 435 aa25.85■■□□□ 1.73
LDLRAD3-203ENST00000528989 BTBD8Q5XKL5 378 aa25.85■■□□□ 1.73
LDLRAD3-203ENST00000528989 SLITRK1Q96PX8 696 aa25.85■■□□□ 1.73
LDLRAD3-203ENST00000528989 COMMD8Q9NX08 183 aa25.85■■□□□ 1.73
LDLRAD3-203ENST00000528989 PRRC2BQ5JSZ5 2229 aaKnown RBP25.84■■□□□ 1.73
LDLRAD3-203ENST00000528989 NRG2O14511 850 aaPredicted RBP25.84■■□□□ 1.73
LDLRAD3-203ENST00000528989 TBX18O95935 607 aa25.84■■□□□ 1.73
LDLRAD3-203ENST00000528989 C1RP00736 705 aa25.84■■□□□ 1.73
LDLRAD3-203ENST00000528989 TNNT1P13805 278 aa25.84■■□□□ 1.73
LDLRAD3-203ENST00000528989 SDC4P31431 198 aa25.84■■□□□ 1.73
LDLRAD3-203ENST00000528989 ADGRE1Q14246 886 aa25.84■■□□□ 1.73
LDLRAD3-203ENST00000528989 C11orf63Q6NUN7 778 aa25.84■■□□□ 1.73
LDLRAD3-203ENST00000528989 TMEM150AQ86TG1 271 aa25.84■■□□□ 1.73
LDLRAD3-203ENST00000528989 NT5DC3Q86UY8 548 aa25.84■■□□□ 1.73
LDLRAD3-203ENST00000528989 GOLGA1Q92805 767 aa25.84■■□□□ 1.73
LDLRAD3-203ENST00000528989 TBCBQ99426 244 aa25.84■■□□□ 1.73
LDLRAD3-203ENST00000528989 CNPY3Q9BT09 278 aa25.84■■□□□ 1.73
LDLRAD3-203ENST00000528989 NSUN3Q9H649 340 aaKnown RBP25.84■■□□□ 1.73
LDLRAD3-203ENST00000528989 LINC01565O15544 149 aa25.83■■□□□ 1.73
LDLRAD3-203ENST00000528989 TADA3O75528 432 aa25.83■■□□□ 1.73
LDLRAD3-203ENST00000528989 ZDHHC11BP0C7U3 371 aa25.83■■□□□ 1.73
LDLRAD3-203ENST00000528989 NOS2P35228 1153 aa25.83■■□□□ 1.73
LDLRAD3-203ENST00000528989 PIGHQ14442 188 aaPredicted RBP25.83■■□□□ 1.73
LDLRAD3-203ENST00000528989 OTUD1Q5VV17 481 aaPredicted RBP25.83■■□□□ 1.73
LDLRAD3-203ENST00000528989 TRMT2BQ96GJ1 504 aaKnown RBP25.83■■□□□ 1.73
LDLRAD3-203ENST00000528989 CORO1BQ9BR76 489 aa25.83■■□□□ 1.73
LDLRAD3-203ENST00000528989 LRRC3Q9BY71 257 aa25.83■■□□□ 1.73
LDLRAD3-203ENST00000528989 TLR8Q9NR97 1041 aaKnown RBP25.83■■□□□ 1.73
LDLRAD3-203ENST00000528989 ABCC13Q9NSE7 274 aa25.83■■□□□ 1.73
LDLRAD3-203ENST00000528989 ZNF638Q14966 1978 aaKnown RBP25.83■■□□□ 1.73
LDLRAD3-203ENST00000528989 SYNJ2BP-COX16A0A087WUM0 186 aa25.83■■□□□ 1.72
LDLRAD3-203ENST00000528989 CCDC195A0A1B0GUA6 201 aa25.83■■□□□ 1.72
LDLRAD3-203ENST00000528989 DNA2P51530 1060 aa25.83■■□□□ 1.72
LDLRAD3-203ENST00000528989 PEX26Q7Z412 305 aa25.83■■□□□ 1.72
LDLRAD3-203ENST00000528989 ITIH5Q86UX2 942 aa25.83■■□□□ 1.72
LDLRAD3-203ENST00000528989 NT5C3BQ969T7 300 aa25.83■■□□□ 1.72
LDLRAD3-203ENST00000528989 NPY6RQ99463 290 aa25.83■■□□□ 1.72
LDLRAD3-203ENST00000528989 IL21Q9HBE4 155 aa25.83■■□□□ 1.72
LDLRAD3-203ENST00000528989 COX16Q9P0S2 106 aa25.83■■□□□ 1.72
LDLRAD3-203ENST00000528989 ASB3Q9Y575 518 aa25.83■■□□□ 1.72
LDLRAD3-203ENST00000528989 ZNF840PA6NDX5 716 aa25.82■■□□□ 1.72
LDLRAD3-203ENST00000528989 SPDYE4A6NLX3 237 aa25.82■■□□□ 1.72
LDLRAD3-203ENST00000528989 GLP2RO95838 553 aa25.82■■□□□ 1.72
LDLRAD3-203ENST00000528989 SLC25A52Q3SY17 297 aa25.82■■□□□ 1.72
LDLRAD3-203ENST00000528989 GAREM2Q75VX8 874 aa25.82■■□□□ 1.72
LDLRAD3-203ENST00000528989 TMC8Q8IU68 726 aa25.82■■□□□ 1.72
LDLRAD3-203ENST00000528989 NIPA2Q8N8Q9 360 aa25.82■■□□□ 1.72
LDLRAD3-203ENST00000528989 FAM172AQ8WUF8 416 aa25.82■■□□□ 1.72
LDLRAD3-203ENST00000528989 ZNF592Q92610 1267 aa25.82■■□□□ 1.72
LDLRAD3-203ENST00000528989 CALR3Q96L12 384 aaKnown RBP25.82■■□□□ 1.72
LDLRAD3-203ENST00000528989 CCSER2Q9H7U1 834 aa25.82■■□□□ 1.72
LDLRAD3-203ENST00000528989 SFMBT1Q9UHJ3 866 aa25.82■■□□□ 1.72
LDLRAD3-203ENST00000528989 DPYSL4O14531 572 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 SPOPO43791 374 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 LRCH4O75427 683 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 ATP1A1P05023 1023 aaKnown RBP25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 RARGP13631 454 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 SSR1P43307 286 aaKnown RBP25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 SULT1E1P49888 294 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 TAS2R40P59535 323 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 CC2D1AQ6P1N0 951 aaPredicted RBP25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 SYCE1Q8N0S2 351 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 EHD2Q9NZN4 543 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 MTCH2Q9Y6C9 303 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 MTCL1Q9Y4B5 1905 aaKnown RBP25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 PRUNE2Q8WUY3 3088 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 M0QYT0 321 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 MDM4O15151 490 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 F11P03951 625 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 PTPN9P43378 593 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 HDAC4P56524 1084 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 NME3Q13232 169 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 MEI1Q5TIA1 1274 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 TXNRD3NBQ6F5E7 133 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 TMC5Q6UXY8 1006 aa25.81■■□□□ 1.72
LDLRAD3-203ENST00000528989 ELMOD1Q8N336 334 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms