RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 MSLNLQ96KJ4 702 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 GUCD1Q96NT3 240 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 ALS2CR12Q96Q35 445 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 CPXM1Q96SM3 734 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 LPIN3Q9BQK8 851 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 C11orf70Q9BRQ4 267 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 ULBP1Q9BZM6 244 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 RETREG1Q9H6L5 497 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 ACP6Q9NPH0 428 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 TBC1D14Q9P2M4 693 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 THEGQ9P2T0 379 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 CNOT8Q9UFF9 292 aaKnown RBP8.3□□□□□ -1.08
SSBP3-211ENST00000528787 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.3□□□□□ -1.08
SSBP3-211ENST00000528787 HBS1LQ9Y450 684 aaKnown RBP8.3□□□□□ -1.08
SSBP3-211ENST00000528787 PCDHA13Q9Y5I0 950 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 CHD9Q3L8U1 2897 aa8.3□□□□□ -1.08
SSBP3-211ENST00000528787 NUP210Q8TEM1 1887 aaPredicted RBP8.3□□□□□ -1.08
SSBP3-211ENST00000528787 TMCO5BA8MYB1 307 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 TLR5O60602 858 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 RFPL2O75678 378 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 BEST1O76090 585 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 VNN2O95498 520 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 LATS1O95835 1130 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 GLP2RO95838 553 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 APOEP02649 317 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 F11P03951 625 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 TUBB4AP04350 444 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 CYP1A2P05177 515 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 CKMP06732 381 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 RARGP13631 454 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 TCF3P15923 654 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 GPD1P21695 349 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 CETN2P41208 172 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 PTPN9P43378 593 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 HARS2P49590 506 aaKnown RBP8.29□□□□□ -1.08
SSBP3-211ENST00000528787 VAV2P52735 878 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 HADHBP55084 474 aaKnown RBP8.29□□□□□ -1.08
SSBP3-211ENST00000528787 NAP1L1P55209 391 aaKnown RBP8.29□□□□□ -1.08
SSBP3-211ENST00000528787 RING1Q06587 406 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 HADHQ16836 314 aaKnown RBP8.29□□□□□ -1.08
SSBP3-211ENST00000528787 SLC25A52Q3SY17 297 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 PTPN20Q4JDL3 420 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 DCAF6Q58WW2 860 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 BRMS1LQ5PSV4 323 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 C10orf120Q5SQS8 335 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 PLEKHA7Q6IQ23 1121 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 MSANTD2Q6P1R3 559 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 SYCE2Q6PIF2 218 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 C1orf228Q6PIY5 440 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 OLFML1Q6UWY5 402 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 Q7L0L9 218 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 STRADAQ7RTN6 431 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 GRASPQ7Z6J2 395 aaPredicted RBP8.29□□□□□ -1.08
SSBP3-211ENST00000528787 PSTKQ8IV42 348 aaKnown RBP8.29□□□□□ -1.08
SSBP3-211ENST00000528787 CCDC117Q8IWD4 279 aaPredicted RBP8.29□□□□□ -1.08
SSBP3-211ENST00000528787 WDTC1Q8N5D0 677 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 TTC9BQ8N6N2 239 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 CELF5Q8N6W0 485 aaKnown RBP8.29□□□□□ -1.08
SSBP3-211ENST00000528787 TDRD5Q8NAT2 981 aaKnown RBP8.29□□□□□ -1.08
SSBP3-211ENST00000528787 SCAMP5Q8TAC9 235 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 FEZF2Q8TBJ5 459 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 DEPDC1BQ8WUY9 529 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 ZNF707Q96C28 371 aaPredicted RBP8.29□□□□□ -1.08
SSBP3-211ENST00000528787 OTUB2Q96DC9 234 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 PGAP3Q96FM1 320 aaPredicted RBP8.29□□□□□ -1.08
SSBP3-211ENST00000528787 CHP1Q99653 195 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 ZSWIM1Q9BR11 485 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 CNPY3Q9BT09 278 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 PHF7Q9BWX1 381 aaPredicted RBP8.29□□□□□ -1.08
SSBP3-211ENST00000528787 CRISPLD1Q9H336 500 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 SMOC2Q9H3U7 446 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 FAM204AQ9H8W3 233 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 ZFP14Q9HCL3 533 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.29□□□□□ -1.08
SSBP3-211ENST00000528787 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.29□□□□□ -1.08
SSBP3-211ENST00000528787 CLEC1BQ9P126 229 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 CTTNBP2NLQ9P2B4 639 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 DNMT3BQ9UBC3 853 aaKnown RBP8.29□□□□□ -1.08
SSBP3-211ENST00000528787 CDH7Q9ULB5 785 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 TLR6Q9Y2C9 796 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 PCDHGC5Q9Y5F6 944 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 CHD7Q9P2D1 2997 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 LAMA3Q16787 3333 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 ANAPC1Q9H1A4 1944 aa8.29□□□□□ -1.08
SSBP3-211ENST00000528787 C2orf16Q68DN1 1984 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 OBSL1O75147 1896 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 A0A1W2PRU2 124 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 SOWAHDA6NJG2 315 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 PAPSS1O43252 624 aaPredicted RBP8.28□□□□□ -1.08
SSBP3-211ENST00000528787 TBX10O75333 385 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 SOAT2O75908 522 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 MTA2O94776 668 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 OAS1P00973 400 aaKnown RBP8.28□□□□□ -1.08
SSBP3-211ENST00000528787 PLEKP08567 350 aaPredicted RBP8.28□□□□□ -1.08
SSBP3-211ENST00000528787 MBL2P11226 248 aaPredicted RBP8.28□□□□□ -1.08
SSBP3-211ENST00000528787 PDGFRAP16234 1089 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 ABCB4P21439 1286 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 CCR1P32246 355 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 GBP2P32456 591 aaPredicted RBP8.28□□□□□ -1.08
SSBP3-211ENST00000528787 MAN1A1P33908 653 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms