RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 PRCCQ92733 491 aaPredicted RBP15.38■□□□□ 0.05
ECHDC1-220ENST00000528402 SAYSD1Q9NPB0 183 aa15.38■□□□□ 0.05
ECHDC1-220ENST00000528402 MIOSQ9NXC5 875 aa15.38■□□□□ 0.05
ECHDC1-220ENST00000528402 FETUBQ9UGM5 382 aa15.38■□□□□ 0.05
ECHDC1-220ENST00000528402 LGALS13Q9UHV8 139 aa15.38■□□□□ 0.05
ECHDC1-220ENST00000528402 TDRD15B5MCY1 1934 aaKnown RBP15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 HACD1B0YJ81 288 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 C9IYK1 514 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 H7C0C1 242 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 M0QZQ0 153 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 F9P00740 461 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 ZSCAN5DPP0CG00 497 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 GHRP10912 638 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 COL6A1P12109 1028 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 PECAM1P16284 738 aaPredicted RBP15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 ATP2A2P16615 1042 aaKnown RBP15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 TYMPP19971 482 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 TKTP29401 623 aaKnown RBP15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 L1CAMP32004 1257 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 ARL4AP40617 200 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 ATP5OP48047 213 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 CTCFP49711 727 aaPredicted RBP15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 SCNN1GP51170 649 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 ZNF135P52742 658 aaPredicted RBP15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 HNRNPH2P55795 449 aaKnown RBP15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 HIF1AQ16665 826 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 MDH1BQ5I0G3 518 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 CLEC20AQ6ZU45 233 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 B4GALNT4Q76KP1 1039 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 BNIPLQ7Z465 357 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 TDRPQ86YL5 185 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 DEFB106AQ8N104 65 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 THEM5Q8N1Q8 247 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 NAT8LQ8N9F0 302 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 GLIS1Q8NBF1 620 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 RAET1EQ8TD07 263 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 IRGQQ8WZA9 623 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 CAPNS2Q96L46 248 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 SLC2A13Q96QE2 648 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 ADAM2Q99965 735 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 LPIN3Q9BQK8 851 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 FERMT1Q9BQL6 677 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 POPDC2Q9HBU9 364 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 AP4E1Q9UPM8 1137 aa15.37■□□□□ 0.05
ECHDC1-220ENST00000528402 GMNCA6NCL1 334 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 E7ESA3 106 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 CHADO15335 359 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 HCRTO43612 131 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 ETS1P14921 441 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 GUCY1A3Q02108 690 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 ADCY1Q08828 1119 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 ADIGQ0VDE8 80 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 MMRN1Q13201 1228 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 KCTD19Q17RG1 926 aaPredicted RBP15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 RAB41Q5JT25 222 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 FAM35AQ86V20 835 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 ECHDC2Q86YB7 292 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 UNC45BQ8IWX7 931 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 PDIK1LQ8N165 341 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 PQLC3Q8N755 202 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 PCDH19Q8TAB3 1148 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 EPS8L3Q8TE67 593 aaKnown RBP15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 LPPQ93052 612 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 SMARCD1Q96GM5 515 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 NPY6RQ99463 290 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 FAM107BQ9H098 131 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 NRDE2Q9H7Z3 1164 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 CSNK1G1Q9HCP0 422 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 PNPLA8Q9NP80 782 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 CRTAC1Q9NQ79 661 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 RGS18Q9NS28 235 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 KANSL3Q9P2N6 904 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 SAE1Q9UBE0 346 aaPredicted RBP15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 FZD10Q9ULW2 581 aa15.36■□□□□ 0.05
ECHDC1-220ENST00000528402 MEIS3P2A8K0S8 358 aa15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 ATP2C2O75185 946 aa15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 AP1G2O75843 785 aa15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 MYCNP04198 464 aaPredicted RBP15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 ELNP15502 786 aa15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 CYP2F1P24903 491 aa15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 SULT1E1P49888 294 aa15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 TKTL1P51854 596 aa15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 ZC3H12AQ5D1E8 599 aaKnown RBP15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 FAM171BQ6P995 826 aa15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 BEND5Q7L4P6 421 aa15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 ZNF598Q86UK7 904 aaKnown RBP15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 FAM71DQ8N9W8 422 aa15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 SLC43A3Q8NBI5 491 aa15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 CLEC4CQ8WTT0 213 aa15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 CPT1BQ92523 772 aa15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 FAM149B1Q96BN6 582 aa15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 PGAP3Q96FM1 320 aaPredicted RBP15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 FTHL17Q9BXU8 183 aa15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 DHX35Q9H5Z1 703 aaKnown RBP15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 USP29Q9HBJ7 922 aa15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 SLC24A2Q9UI40 661 aa15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 GGA2Q9UJY4 613 aa15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 ZMYND8Q9ULU4 1186 aaPredicted RBP15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 RAD54BQ9Y620 910 aa15.35■□□□□ 0.05
ECHDC1-220ENST00000528402 SF3B1O75533 1304 aaKnown RBP eCLIP15.35■□□□□ 0.058e-6■■■■■ 107
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms