RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 PCDHAC1Q9H158 963 aa6.82□□□□□ -1.32
PCF11-202ENST00000528336 R3HDMLQ9H3Y0 253 aa6.82□□□□□ -1.32
PCF11-202ENST00000528336 ZBTB26Q9HCK0 441 aa6.82□□□□□ -1.32
PCF11-202ENST00000528336 SH3BP4Q9P0V3 963 aa6.82□□□□□ -1.32
PCF11-202ENST00000528336 CDC23Q9UJX2 597 aa6.82□□□□□ -1.32
PCF11-202ENST00000528336 SLC27A6Q9Y2P4 619 aa6.82□□□□□ -1.32
PCF11-202ENST00000528336 CCDC189A1A4V9 331 aa6.81□□□□□ -1.32
PCF11-202ENST00000528336 FAM234BA2RU67 622 aa6.81□□□□□ -1.32
PCF11-202ENST00000528336 LRRC3CA6NJW4 275 aa6.81□□□□□ -1.32
PCF11-202ENST00000528336 C1QL1O75973 258 aa6.81□□□□□ -1.32
PCF11-202ENST00000528336 IDEP14735 1019 aa6.81□□□□□ -1.32
PCF11-202ENST00000528336 WT1P19544 449 aaPredicted RBP6.81□□□□□ -1.32
PCF11-202ENST00000528336 BDNFP23560 247 aa6.81□□□□□ -1.32
PCF11-202ENST00000528336 FPR3P25089 353 aa6.81□□□□□ -1.32
PCF11-202ENST00000528336 GABRB3P28472 473 aa6.81□□□□□ -1.32
PCF11-202ENST00000528336 SUMO2P61956 95 aaKnown RBP6.81□□□□□ -1.32
PCF11-202ENST00000528336 CYP4F2P78329 520 aa6.81□□□□□ -1.32
PCF11-202ENST00000528336 DHX8Q14562 1220 aaKnown RBP6.81□□□□□ -1.32
PCF11-202ENST00000528336 SMN1Q16637 294 aaKnown RBP6.81□□□□□ -1.32
PCF11-202ENST00000528336 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.81□□□□□ -1.32
PCF11-202ENST00000528336 RAP1GAP2Q684P5 730 aa6.81□□□□□ -1.32
PCF11-202ENST00000528336 KIAA0408Q6ZU52 694 aa6.81□□□□□ -1.32
PCF11-202ENST00000528336 RD3Q7Z3Z2 195 aa6.81□□□□□ -1.32
PCF11-202ENST00000528336 CCDC28AQ8IWP9 274 aa6.81□□□□□ -1.32
PCF11-202ENST00000528336 FAM98AQ8NCA5 519 aaKnown RBP6.81□□□□□ -1.32
PCF11-202ENST00000528336 ZNF384Q8TF68 577 aa6.81□□□□□ -1.32
PCF11-202ENST00000528336 TBC1D5Q92609 795 aa6.81□□□□□ -1.32
PCF11-202ENST00000528336 NAP1L5Q96NT1 182 aaPredicted RBP6.81□□□□□ -1.32
PCF11-202ENST00000528336 RGL1Q9NZL6 768 aa6.81□□□□□ -1.32
PCF11-202ENST00000528336 TMOD4Q9NZQ9 345 aa6.81□□□□□ -1.32
PCF11-202ENST00000528336 NKX1-2Q9UD57 310 aaPredicted RBP6.81□□□□□ -1.32
PCF11-202ENST00000528336 VPS51Q9UID3 782 aa6.81□□□□□ -1.32
PCF11-202ENST00000528336 AMFRQ9UKV5 643 aa6.81□□□□□ -1.32
PCF11-202ENST00000528336 DAAM1Q9Y4D1 1078 aa6.81□□□□□ -1.32
PCF11-202ENST00000528336 WNT6Q9Y6F9 365 aa6.81□□□□□ -1.32
PCF11-202ENST00000528336 CEP164Q9UPV0 1460 aa6.8□□□□□ -1.32
PCF11-202ENST00000528336 PODXLO00592 558 aa6.8□□□□□ -1.32
PCF11-202ENST00000528336 ZNF213O14771 459 aa6.8□□□□□ -1.32
PCF11-202ENST00000528336 KCNQ3O43525 872 aa6.8□□□□□ -1.32
PCF11-202ENST00000528336 SPRY2O43597 315 aa6.8□□□□□ -1.32
PCF11-202ENST00000528336 CCNT2O60583 730 aaKnown RBP6.8□□□□□ -1.32
PCF11-202ENST00000528336 EXOC3O60645 756 aa6.8□□□□□ -1.32
PCF11-202ENST00000528336 RBL1P28749 1068 aa6.8□□□□□ -1.32
PCF11-202ENST00000528336 ELLP55199 621 aaPredicted RBP6.8□□□□□ -1.32
PCF11-202ENST00000528336 SOX10P56693 466 aa6.8□□□□□ -1.32
PCF11-202ENST00000528336 PSG6Q00889 435 aa6.8□□□□□ -1.32
PCF11-202ENST00000528336 GPS1Q13098 491 aa6.8□□□□□ -1.32
PCF11-202ENST00000528336 GRM1Q13255 1194 aa6.8□□□□□ -1.32
PCF11-202ENST00000528336 CEP85Q6P2H3 762 aa6.8□□□□□ -1.32
PCF11-202ENST00000528336 ZNF804AQ7Z570 1209 aa6.8□□□□□ -1.32
PCF11-202ENST00000528336 PCGF5Q86SE9 256 aa6.8□□□□□ -1.32
PCF11-202ENST00000528336 SAMD3Q8N6K7 520 aa6.8□□□□□ -1.32
PCF11-202ENST00000528336 SARAFQ96BY9 339 aa6.8□□□□□ -1.32
PCF11-202ENST00000528336 ZDHHC12Q96GR4 267 aa6.8□□□□□ -1.32
PCF11-202ENST00000528336 GDF15Q99988 308 aa6.8□□□□□ -1.32
PCF11-202ENST00000528336 SELENOOQ9BVL4 669 aa6.8□□□□□ -1.32
PCF11-202ENST00000528336 EIF2AQ9BY44 585 aaKnown RBP6.8□□□□□ -1.32
PCF11-202ENST00000528336 ARFGAP3Q9NP61 516 aa6.8□□□□□ -1.32
PCF11-202ENST00000528336 ARPP21Q9UBL0 812 aaPredicted RBP6.8□□□□□ -1.32
PCF11-202ENST00000528336 MGAT4CQ9UBM8 478 aa6.8□□□□□ -1.32
PCF11-202ENST00000528336 FNDC1Q4ZHG4 1894 aaPredicted RBP6.79□□□□□ -1.32
PCF11-202ENST00000528336 IFRD1O00458 451 aaPredicted RBP6.79□□□□□ -1.32
PCF11-202ENST00000528336 TJP3O95049 919 aa6.79□□□□□ -1.32
PCF11-202ENST00000528336 CD19P15391 556 aa6.79□□□□□ -1.32
PCF11-202ENST00000528336 PPM1AP35813 382 aa6.79□□□□□ -1.32
PCF11-202ENST00000528336 BTKQ06187 659 aa6.79□□□□□ -1.32
PCF11-202ENST00000528336 ARHGAP15Q53QZ3 475 aa6.79□□□□□ -1.32
PCF11-202ENST00000528336 DGKKQ5KSL6 1271 aa6.79□□□□□ -1.32
PCF11-202ENST00000528336 USP17L6PQ6QN14 398 aa6.79□□□□□ -1.32
PCF11-202ENST00000528336 SYTL1Q8IYJ3 562 aa6.79□□□□□ -1.32
PCF11-202ENST00000528336 FAM9BQ8IZU0 186 aa6.79□□□□□ -1.32
PCF11-202ENST00000528336 WDYHV1Q96HA8 205 aa6.79□□□□□ -1.32
PCF11-202ENST00000528336 BBC3Q96PG8 261 aaPredicted RBP6.79□□□□□ -1.32
PCF11-202ENST00000528336 CIPCQ9C0C6 399 aa6.79□□□□□ -1.32
PCF11-202ENST00000528336 ZCWPW1Q9H0M4 648 aa6.79□□□□□ -1.32
PCF11-202ENST00000528336 SWAP70Q9UH65 585 aa6.79□□□□□ -1.32
PCF11-202ENST00000528336 STEAP1Q9UHE8 339 aa6.79□□□□□ -1.32
PCF11-202ENST00000528336 ARHGEF17Q96PE2 2063 aaPredicted RBP6.79□□□□□ -1.32
PCF11-202ENST00000528336 MRC2Q9UBG0 1479 aa6.79□□□□□ -1.32
PCF11-202ENST00000528336 TARM1B6A8C7 271 aa6.78□□□□□ -1.32
PCF11-202ENST00000528336 SMIM22K7EJ46 135 aa6.78□□□□□ -1.32
PCF11-202ENST00000528336 JTBO76095 146 aa6.78□□□□□ -1.32
PCF11-202ENST00000528336 FGAP02671 866 aa6.78□□□□□ -1.32
PCF11-202ENST00000528336 SETSIPP0DME0 302 aa6.78□□□□□ -1.32
PCF11-202ENST00000528336 ARP10275 920 aa6.78□□□□□ -1.32
PCF11-202ENST00000528336 PECAM1P16284 738 aaPredicted RBP6.78□□□□□ -1.32
PCF11-202ENST00000528336 TECP42680 631 aa6.78□□□□□ -1.32
PCF11-202ENST00000528336 FHL3Q13643 280 aa6.78□□□□□ -1.32
PCF11-202ENST00000528336 RNASE12Q5GAN4 147 aaKnown RBP6.78□□□□□ -1.32
PCF11-202ENST00000528336 ABLIM2Q6H8Q1 611 aa6.78□□□□□ -1.32
PCF11-202ENST00000528336 MRNIPQ6NTE8 343 aa6.78□□□□□ -1.32
PCF11-202ENST00000528336 GGT6Q6P531 493 aa6.78□□□□□ -1.32
PCF11-202ENST00000528336 C1orf228Q6PIY5 440 aa6.78□□□□□ -1.32
PCF11-202ENST00000528336 MTHFD1LQ6UB35 978 aa6.78□□□□□ -1.32
PCF11-202ENST00000528336 TOGARAM2Q6ZUX3 1019 aa6.78□□□□□ -1.32
PCF11-202ENST00000528336 PTCHD4Q6ZW05 846 aa6.78□□□□□ -1.32
PCF11-202ENST00000528336 DNAJC10Q8IXB1 793 aa6.78□□□□□ -1.32
PCF11-202ENST00000528336 MBD3L2Q8NHZ7 208 aaPredicted RBP6.78□□□□□ -1.32
PCF11-202ENST00000528336 ABHD5Q8WTS1 349 aa6.78□□□□□ -1.32
PCF11-202ENST00000528336 MUL1Q969V5 352 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms